RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 MTA3Q9BTC8 594 aa17.44■□□□□ 0.38
CACNA1A-235ENST00000637004 GNL3LQ9NVN8 582 aaKnown RBP17.44■□□□□ 0.38
CACNA1A-235ENST00000637004 ATXN2Q99700 1313 aaKnown RBP17.44■□□□□ 0.38
CACNA1A-235ENST00000637004 MYO5AQ9Y4I1 1855 aaKnown RBP17.44■□□□□ 0.38
CACNA1A-235ENST00000637004 H7C1D1 291 aa17.44■□□□□ 0.38
CACNA1A-235ENST00000637004 METTL24Q5JXM2 366 aa17.44■□□□□ 0.38
CACNA1A-235ENST00000637004 GSPT2Q8IYD1 628 aaKnown RBP17.44■□□□□ 0.38
CACNA1A-235ENST00000637004 ZNF622Q969S3 477 aaKnown RBP eCLIP17.44■□□□□ 0.38
CACNA1A-235ENST00000637004 INCENPQ9NQS7 918 aa17.44■□□□□ 0.38
CACNA1A-235ENST00000637004 SPATS2Q86XZ4 545 aaKnown RBP17.43■□□□□ 0.38
CACNA1A-235ENST00000637004 FANCBQ8NB91 859 aa17.43■□□□□ 0.38
CACNA1A-235ENST00000637004 CNKSR2Q8WXI2 1034 aa17.43■□□□□ 0.38
CACNA1A-235ENST00000637004 SH3GL2Q99962 352 aa17.43■□□□□ 0.38
CACNA1A-235ENST00000637004 PIH1D3Q9NQM4 214 aaKnown RBP17.43■□□□□ 0.38
CACNA1A-235ENST00000637004 CAPN11Q9UMQ6 739 aa17.43■□□□□ 0.38
CACNA1A-235ENST00000637004 MYH8P13535 1937 aa17.43■□□□□ 0.38
CACNA1A-235ENST00000637004 MYH7P12883 1935 aa17.43■□□□□ 0.38
CACNA1A-235ENST00000637004 GTPBP6O43824 516 aaPredicted RBP17.43■□□□□ 0.38
CACNA1A-235ENST00000637004 KRT2P35908 639 aa17.43■□□□□ 0.38
CACNA1A-235ENST00000637004 DDB1Q16531 1140 aa17.43■□□□□ 0.38
CACNA1A-235ENST00000637004 ZNF658Q5TYW1 1059 aaPredicted RBP17.43■□□□□ 0.38
CACNA1A-235ENST00000637004 ILDR2Q71H61 639 aa17.43■□□□□ 0.38
CACNA1A-235ENST00000637004 ANKRD18AQ8IVF6 992 aa17.43■□□□□ 0.38
CACNA1A-235ENST00000637004 IFNL3Q8IZI9 196 aa17.43■□□□□ 0.38
CACNA1A-235ENST00000637004 MB21D1Q8N884 522 aa17.43■□□□□ 0.38
CACNA1A-235ENST00000637004 JADE2Q9NQC1 790 aa17.43■□□□□ 0.38
CACNA1A-235ENST00000637004 ZNHIT6Q9NWK9 470 aaKnown RBP17.43■□□□□ 0.38
CACNA1A-235ENST00000637004 TJP1Q07157 1748 aa17.43■□□□□ 0.38
CACNA1A-235ENST00000637004 COBLO75128 1261 aa17.43■□□□□ 0.38
CACNA1A-235ENST00000637004 MAP2K2P36507 400 aa17.43■□□□□ 0.38
CACNA1A-235ENST00000637004 CTDSPL2Q05D32 466 aa17.43■□□□□ 0.38
CACNA1A-235ENST00000637004 SND1Q7KZF4 910 aaKnown RBP eCLIP17.43■□□□□ 0.38
CACNA1A-235ENST00000637004 HOMEZQ8IX15 550 aa17.43■□□□□ 0.38
CACNA1A-235ENST00000637004 MMGT1Q8N4V1 131 aa17.43■□□□□ 0.38
CACNA1A-235ENST00000637004 RNF26Q9BY78 433 aaPredicted RBP17.43■□□□□ 0.38
CACNA1A-235ENST00000637004 MEGF6O75095 1541 aa17.43■□□□□ 0.38
CACNA1A-235ENST00000637004 GRIN2DO15399 1336 aa17.42■□□□□ 0.38
CACNA1A-235ENST00000637004 XDHP47989 1333 aa17.42■□□□□ 0.38
CACNA1A-235ENST00000637004 LGALS16A8MUM7 142 aa17.42■□□□□ 0.38
CACNA1A-235ENST00000637004 EPB41P11171 864 aaKnown RBP17.42■□□□□ 0.38
CACNA1A-235ENST00000637004 IDEP14735 1019 aa17.42■□□□□ 0.38
CACNA1A-235ENST00000637004 ITIH3Q06033 890 aa17.42■□□□□ 0.38
CACNA1A-235ENST00000637004 PPP2R5BQ15173 497 aa17.42■□□□□ 0.38
CACNA1A-235ENST00000637004 ACSBG1Q96GR2 724 aa17.42■□□□□ 0.38
CACNA1A-235ENST00000637004 RUFY1Q96T51 708 aa17.42■□□□□ 0.38
CACNA1A-235ENST00000637004 CYP27B1O15528 508 aa17.42■□□□□ 0.38
CACNA1A-235ENST00000637004 KIAA0754O94854 1291 aa17.42■□□□□ 0.38
CACNA1A-235ENST00000637004 MEA1Q16626 185 aa17.42■□□□□ 0.38
CACNA1A-235ENST00000637004 ALS2CLQ60I27 953 aa17.42■□□□□ 0.38
CACNA1A-235ENST00000637004 RPAINQ86UA6 219 aa17.42■□□□□ 0.38
CACNA1A-235ENST00000637004 CCDC170Q8IYT3 715 aa17.42■□□□□ 0.38
CACNA1A-235ENST00000637004 PARP4Q9UKK3 1724 aaKnown RBP17.41■□□□□ 0.38
CACNA1A-235ENST00000637004 LAMB4A4D0S4 1761 aa17.41■□□□□ 0.38
CACNA1A-235ENST00000637004 PDE2AO00408 941 aaPredicted RBP17.41■□□□□ 0.38
CACNA1A-235ENST00000637004 PARP1P09874 1014 aaKnown RBP17.41■□□□□ 0.38
CACNA1A-235ENST00000637004 SKOR1P84550 965 aa17.41■□□□□ 0.38
CACNA1A-235ENST00000637004 FBXW10Q5XX13 1052 aa17.41■□□□□ 0.38
CACNA1A-235ENST00000637004 WDR59Q6PJI9 974 aa17.41■□□□□ 0.38
CACNA1A-235ENST00000637004 CMTR1Q8N1G2 835 aaKnown RBP17.41■□□□□ 0.38
CACNA1A-235ENST00000637004 NUP133Q8WUM0 1156 aa17.41■□□□□ 0.38
CACNA1A-235ENST00000637004 STAMQ92783 540 aa17.41■□□□□ 0.38
CACNA1A-235ENST00000637004 BLZF1Q9H2G9 400 aa17.41■□□□□ 0.38
CACNA1A-235ENST00000637004 EEF1GP26641 437 aaKnown RBP17.41■□□□□ 0.38
CACNA1A-235ENST00000637004 RRP12Q5JTH9 1297 aaKnown RBP17.41■□□□□ 0.38
CACNA1A-235ENST00000637004 PTF1AQ7RTS3 328 aa17.41■□□□□ 0.38
CACNA1A-235ENST00000637004 ZNF654Q8IZM8 581 aa17.41■□□□□ 0.38
CACNA1A-235ENST00000637004 PRPF38AQ8NAV1 312 aaKnown RBP17.41■□□□□ 0.38
CACNA1A-235ENST00000637004 ISCA1Q9BUE6 129 aa17.41■□□□□ 0.38
CACNA1A-235ENST00000637004 TSGA10Q9BZW7 698 aa17.41■□□□□ 0.38
CACNA1A-235ENST00000637004 CXorf56Q9H5V9 222 aa17.41■□□□□ 0.38
CACNA1A-235ENST00000637004 TCRBV5S4A2TA0A5A2 114 aa17.4■□□□□ 0.38
CACNA1A-235ENST00000637004 ATP6V1AP38606 617 aa17.4■□□□□ 0.38
CACNA1A-235ENST00000637004 C2orf54Q08AI8 447 aa17.4■□□□□ 0.38
CACNA1A-235ENST00000637004 EMBQ6PCB8 327 aa17.4■□□□□ 0.38
CACNA1A-235ENST00000637004 KCNV1Q6PIU1 500 aa17.4■□□□□ 0.38
CACNA1A-235ENST00000637004 EPB41L4AQ9HCS5 686 aaPredicted RBP17.4■□□□□ 0.38
CACNA1A-235ENST00000637004 FAM205CA6NFA0 338 aa17.4■□□□□ 0.38
CACNA1A-235ENST00000637004 NDUFAB1O14561 156 aa17.4■□□□□ 0.38
CACNA1A-235ENST00000637004 ZNF185O15231 689 aa17.4■□□□□ 0.38
CACNA1A-235ENST00000637004 EPHB4P54760 987 aa17.4■□□□□ 0.38
CACNA1A-235ENST00000637004 STAG1Q8WVM7 1258 aa17.4■□□□□ 0.38
CACNA1A-235ENST00000637004 CCDC85AQ96PX6 553 aaPredicted RBP17.4■□□□□ 0.38
CACNA1A-235ENST00000637004 NUP58Q9BVL2 599 aa17.4■□□□□ 0.38
CACNA1A-235ENST00000637004 PLA2G12BQ9BX93 195 aa17.4■□□□□ 0.38
CACNA1A-235ENST00000637004 PES1O00541 588 aaKnown RBP17.39■□□□□ 0.38
CACNA1A-235ENST00000637004 HSF2BPO75031 334 aa17.39■□□□□ 0.38
CACNA1A-235ENST00000637004 CSF1RP07333 972 aa17.39■□□□□ 0.38
CACNA1A-235ENST00000637004 KIF5AQ12840 1032 aa17.39■□□□□ 0.38
CACNA1A-235ENST00000637004 OTUD6BQ8N6M0 293 aa17.39■□□□□ 0.38
CACNA1A-235ENST00000637004 RETREG2Q8NC44 543 aa17.39■□□□□ 0.38
CACNA1A-235ENST00000637004 ZCRB1Q8TBF4 217 aaKnown RBP17.39■□□□□ 0.38
CACNA1A-235ENST00000637004 CABS1Q96KC9 395 aa17.39■□□□□ 0.38
CACNA1A-235ENST00000637004 ZKSCAN3Q9BRR0 538 aa17.39■□□□□ 0.38
CACNA1A-235ENST00000637004 PHF20Q9BVI0 1012 aa17.39■□□□□ 0.38
CACNA1A-235ENST00000637004 NACAP1Q9BZK3 213 aa17.39■□□□□ 0.38
CACNA1A-235ENST00000637004 EHD4Q9H223 541 aa17.39■□□□□ 0.38
CACNA1A-235ENST00000637004 VPS54Q9P1Q0 977 aa17.39■□□□□ 0.38
CACNA1A-235ENST00000637004 RIPOR2Q9Y4F9 1068 aa17.39■□□□□ 0.38
CACNA1A-235ENST00000637004 A1BGP04217 495 aa17.39■□□□□ 0.37
CACNA1A-235ENST00000637004 UQCRFS1P1P0C7P4 283 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms