RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 AS3MTQ9HBK9 375 aa17.78■□□□□ 0.44
CLN8-209ENST00000635970 RANBP6O60518 1105 aaKnown RBP17.77■□□□□ 0.44
CLN8-209ENST00000635970 ICA1Q05084 483 aa17.77■□□□□ 0.44
CLN8-209ENST00000635970 RESTQ13127 1097 aa17.77■□□□□ 0.44
CLN8-209ENST00000635970 ZYXQ15942 572 aaKnown RBP17.77■□□□□ 0.44
CLN8-209ENST00000635970 TAF3Q5VWG9 929 aa17.77■□□□□ 0.44
CLN8-209ENST00000635970 MFSD6Q6ZSS7 791 aa17.77■□□□□ 0.44
CLN8-209ENST00000635970 A0A0G2JLL6 359 aaPredicted RBP17.77■□□□□ 0.43
CLN8-209ENST00000635970 KIF2AO00139 706 aaPredicted RBP17.77■□□□□ 0.43
CLN8-209ENST00000635970 ORC4O43929 436 aa17.77■□□□□ 0.43
CLN8-209ENST00000635970 NR1I2O75469 434 aa17.77■□□□□ 0.43
CLN8-209ENST00000635970 TSPY3P0CV98 308 aa17.77■□□□□ 0.43
CLN8-209ENST00000635970 TSPY8P0CW00 308 aa17.77■□□□□ 0.43
CLN8-209ENST00000635970 HMGCS2P54868 508 aa17.77■□□□□ 0.43
CLN8-209ENST00000635970 TFAP4Q01664 338 aa17.77■□□□□ 0.43
CLN8-209ENST00000635970 GABPB1Q06547 395 aaPredicted RBP17.77■□□□□ 0.43
CLN8-209ENST00000635970 SREBF2Q12772 1141 aa17.77■□□□□ 0.43
CLN8-209ENST00000635970 MOGSQ13724 837 aa17.77■□□□□ 0.43
CLN8-209ENST00000635970 TPD52L1Q16890 204 aaPredicted RBP17.77■□□□□ 0.43
CLN8-209ENST00000635970 PRRT2Q7Z6L0 340 aaPredicted RBP17.77■□□□□ 0.43
CLN8-209ENST00000635970 WDR18Q9BV38 432 aa17.77■□□□□ 0.43
CLN8-209ENST00000635970 PLIN4Q96Q06 1357 aa17.76■□□□□ 0.43
CLN8-209ENST00000635970 A0A1W2PRG0 241 aa17.76■□□□□ 0.43
CLN8-209ENST00000635970 TSPY2A6NKD2 308 aa17.76■□□□□ 0.43
CLN8-209ENST00000635970 CXCL11O14625 94 aa17.76■□□□□ 0.43
CLN8-209ENST00000635970 NMT2O60551 498 aa17.76■□□□□ 0.43
CLN8-209ENST00000635970 HMGB1P09429 215 aaKnown RBP17.76■□□□□ 0.43
CLN8-209ENST00000635970 TM4SF4P48230 202 aa17.76■□□□□ 0.43
CLN8-209ENST00000635970 STX1AQ16623 288 aa17.76■□□□□ 0.43
CLN8-209ENST00000635970 SIAH1Q8IUQ4 282 aa17.76■□□□□ 0.43
CLN8-209ENST00000635970 PGBD1Q96JS3 809 aa17.76■□□□□ 0.43
CLN8-209ENST00000635970 TESPA1A2RU30 521 aaPredicted RBP17.75■□□□□ 0.43
CLN8-209ENST00000635970 H3BQV1 296 aa17.75■□□□□ 0.43
CLN8-209ENST00000635970 CETPP11597 493 aa17.75■□□□□ 0.43
CLN8-209ENST00000635970 BACE1P56817 501 aa17.75■□□□□ 0.43
CLN8-209ENST00000635970 IFFO2Q5TF58 517 aa17.75■□□□□ 0.43
CLN8-209ENST00000635970 GADL1Q6ZQY3 521 aa17.75■□□□□ 0.43
CLN8-209ENST00000635970 IFNL1Q8IU54 200 aa17.75■□□□□ 0.43
CLN8-209ENST00000635970 LRRC8AQ8IWT6 810 aa17.75■□□□□ 0.43
CLN8-209ENST00000635970 CEP95Q96GE4 821 aa17.75■□□□□ 0.43
CLN8-209ENST00000635970 C16orf45Q96MC5 204 aaPredicted RBP17.75■□□□□ 0.43
CLN8-209ENST00000635970 NEK1Q96PY6 1258 aa17.75■□□□□ 0.43
CLN8-209ENST00000635970 RNF41Q9H4P4 317 aaPredicted RBP17.75■□□□□ 0.43
CLN8-209ENST00000635970 TFIP11Q9UBB9 837 aaKnown RBP17.75■□□□□ 0.43
CLN8-209ENST00000635970 IGKV6D-41A0A0C4DH26 115 aa17.75■□□□□ 0.43
CLN8-209ENST00000635970 USP17L10C9JJH3 530 aa17.75■□□□□ 0.43
CLN8-209ENST00000635970 EEF2P13639 858 aaKnown RBP17.75■□□□□ 0.43
CLN8-209ENST00000635970 ATP2B2Q01814 1243 aa17.75■□□□□ 0.43
CLN8-209ENST00000635970 IQCB1Q15051 598 aa17.75■□□□□ 0.43
CLN8-209ENST00000635970 FAM173BQ6P4H8 233 aa17.75■□□□□ 0.43
CLN8-209ENST00000635970 STOX1Q6ZVD7 989 aa17.75■□□□□ 0.43
CLN8-209ENST00000635970 DNAJC25Q9H1X3 360 aa17.75■□□□□ 0.43
CLN8-209ENST00000635970 RCOR1Q9UKL0 485 aa17.75■□□□□ 0.43
CLN8-209ENST00000635970 B4E1Z4 1266 aa17.74■□□□□ 0.43
CLN8-209ENST00000635970 BTBD19C9JJ37 291 aa17.74■□□□□ 0.43
CLN8-209ENST00000635970 U2AF2P26368 475 aaKnown RBP eCLIP17.74■□□□□ 0.434e-7■■■■■ 30.7
CLN8-209ENST00000635970 MAP2K1Q02750 393 aaPredicted RBP17.74■□□□□ 0.43
CLN8-209ENST00000635970 LRMPQ12912 555 aa17.74■□□□□ 0.43
CLN8-209ENST00000635970 TREML2Q5T2D2 321 aa17.74■□□□□ 0.43
CLN8-209ENST00000635970 CEP135Q66GS9 1140 aa17.74■□□□□ 0.43
CLN8-209ENST00000635970 NEDD1Q8NHV4 660 aa17.74■□□□□ 0.43
CLN8-209ENST00000635970 CACTINQ8WUQ7 758 aaKnown RBP17.74■□□□□ 0.43
CLN8-209ENST00000635970 KANSL2Q9H9L4 492 aa17.74■□□□□ 0.43
CLN8-209ENST00000635970 IL17RBQ9NRM6 502 aa17.74■□□□□ 0.43
CLN8-209ENST00000635970 TUBB4AP04350 444 aa17.73■□□□□ 0.43
CLN8-209ENST00000635970 FAM193AP78312 1265 aa17.73■□□□□ 0.43
CLN8-209ENST00000635970 SMARCC2Q8TAQ2 1214 aa17.73■□□□□ 0.43
CLN8-209ENST00000635970 WBP1LQ9NX94 342 aa17.73■□□□□ 0.43
CLN8-209ENST00000635970 NRBP1Q9UHY1 535 aa17.73■□□□□ 0.43
CLN8-209ENST00000635970 TSKSQ9UJT2 592 aa17.73■□□□□ 0.43
CLN8-209ENST00000635970 DDX41Q9UJV9 622 aaKnown RBP17.73■□□□□ 0.43
CLN8-209ENST00000635970 MORC2Q9Y6X9 1032 aaPredicted RBP17.73■□□□□ 0.43
CLN8-209ENST00000635970 E7EWF7 191 aa17.73■□□□□ 0.43
CLN8-209ENST00000635970 PCP11498 1178 aaKnown RBP17.73■□□□□ 0.43
CLN8-209ENST00000635970 GSDMDP57764 484 aa17.73■□□□□ 0.43
CLN8-209ENST00000635970 INHBEP58166 350 aa17.73■□□□□ 0.43
CLN8-209ENST00000635970 GPAT2Q6NUI2 795 aa17.73■□□□□ 0.43
CLN8-209ENST00000635970 BRF1Q92994 677 aa17.73■□□□□ 0.43
CLN8-209ENST00000635970 ZKSCAN3Q9BRR0 538 aa17.73■□□□□ 0.43
CLN8-209ENST00000635970 ARHGEF10LQ9HCE6 1279 aa17.73■□□□□ 0.43
CLN8-209ENST00000635970 EMILIN3Q9NT22 766 aa17.73■□□□□ 0.43
CLN8-209ENST00000635970 ANO10Q9NW15 660 aa17.73■□□□□ 0.43
CLN8-209ENST00000635970 RNF186Q9NXI6 227 aa17.73■□□□□ 0.43
CLN8-209ENST00000635970 TRPA1O75762 1119 aa17.72■□□□□ 0.43
CLN8-209ENST00000635970 COL9A3Q14050 684 aaPredicted RBP17.72■□□□□ 0.43
CLN8-209ENST00000635970 SH3D19Q5HYK7 790 aa17.72■□□□□ 0.43
CLN8-209ENST00000635970 REM2Q8IYK8 340 aaPredicted RBP17.72■□□□□ 0.43
CLN8-209ENST00000635970 ESR2Q92731 530 aa17.72■□□□□ 0.43
CLN8-209ENST00000635970 ZNF396Q96N95 335 aaPredicted RBP17.72■□□□□ 0.43
CLN8-209ENST00000635970 NAT10Q9H0A0 1025 aaKnown RBP17.72■□□□□ 0.43
CLN8-209ENST00000635970 KIAA1683Q9H0B3 1180 aa17.72■□□□□ 0.43
CLN8-209ENST00000635970 MTMR4Q9NYA4 1195 aa17.72■□□□□ 0.43
CLN8-209ENST00000635970 PARP14Q460N5 1801 aa17.72■□□□□ 0.43
CLN8-209ENST00000635970 HSPA1AP0DMV8 641 aaKnown RBP17.71■□□□□ 0.43
CLN8-209ENST00000635970 HSPA1BP0DMV9 641 aaKnown RBP17.71■□□□□ 0.43
CLN8-209ENST00000635970 PTPN14Q15678 1187 aa17.71■□□□□ 0.43
CLN8-209ENST00000635970 KIAA1755Q5JYT7 1200 aa17.71■□□□□ 0.43
CLN8-209ENST00000635970 IMPACTQ9P2X3 320 aa17.71■□□□□ 0.43
CLN8-209ENST00000635970 ZHX1Q9UKY1 873 aaPredicted RBP17.71■□□□□ 0.43
CLN8-209ENST00000635970 SPDYE4A6NLX3 237 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms