RNA–Protein interactions for RNA: ENST00000635682.1

HSPG2-214, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-214ENST00000635682 TRDNQ13061 729 aa17.44■□□□□ 0.38
HSPG2-214ENST00000635682 SENP6Q9GZR1 1112 aaPredicted RBP17.44■□□□□ 0.38
HSPG2-214ENST00000635682 DDX20Q9UHI6 824 aaKnown RBP17.44■□□□□ 0.38
HSPG2-214ENST00000635682 STX8Q9UNK0 236 aa17.44■□□□□ 0.38
HSPG2-214ENST00000635682 CTDP1Q9Y5B0 961 aaPredicted RBP17.44■□□□□ 0.38
HSPG2-214ENST00000635682 U3KPZ7 1027 aaPredicted RBP17.44■□□□□ 0.38
HSPG2-214ENST00000635682 FRMPD3Q5JV73 1810 aa17.44■□□□□ 0.38
HSPG2-214ENST00000635682 WDR46O15213 610 aaKnown RBP17.43■□□□□ 0.38
HSPG2-214ENST00000635682 COBLO75128 1261 aa17.43■□□□□ 0.38
HSPG2-214ENST00000635682 CDC45O75419 566 aa17.43■□□□□ 0.38
HSPG2-214ENST00000635682 NCAPG2Q86XI2 1143 aa17.43■□□□□ 0.38
HSPG2-214ENST00000635682 STAG1Q8WVM7 1258 aa17.43■□□□□ 0.38
HSPG2-214ENST00000635682 CEP95Q96GE4 821 aa17.43■□□□□ 0.38
HSPG2-214ENST00000635682 KRT23Q9C075 422 aa17.43■□□□□ 0.38
HSPG2-214ENST00000635682 CNNM2Q9H8M5 875 aa17.43■□□□□ 0.38
HSPG2-214ENST00000635682 DNAH12Q6ZR08 3092 aa17.43■□□□□ 0.38
HSPG2-214ENST00000635682 ZNFX1Q9P2E3 1918 aaKnown RBP17.43■□□□□ 0.38
HSPG2-214ENST00000635682 SGSM2O43147 1006 aa17.42■□□□□ 0.38
HSPG2-214ENST00000635682 STRNO43815 780 aa17.42■□□□□ 0.38
HSPG2-214ENST00000635682 ATN1P54259 1190 aaPredicted RBP17.42■□□□□ 0.38
HSPG2-214ENST00000635682 CCDC178Q5BJE1 867 aa17.42■□□□□ 0.38
HSPG2-214ENST00000635682 PRAMEF19Q5SWL8 479 aa17.42■□□□□ 0.38
HSPG2-214ENST00000635682 ANO1Q5XXA6 986 aa17.42■□□□□ 0.38
HSPG2-214ENST00000635682 IQCA1Q86XH1 822 aa17.42■□□□□ 0.38
HSPG2-214ENST00000635682 MB21D1Q8N884 522 aa17.42■□□□□ 0.38
HSPG2-214ENST00000635682 SHCBP1Q8NEM2 672 aa17.42■□□□□ 0.38
HSPG2-214ENST00000635682 MTMR4Q9NYA4 1195 aa17.42■□□□□ 0.38
HSPG2-214ENST00000635682 SYNPO2Q9UMS6 1093 aa17.42■□□□□ 0.38
HSPG2-214ENST00000635682 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.42■□□□□ 0.381e-10■■■□□ 18.9
HSPG2-214ENST00000635682 PLIN4Q96Q06 1357 aa17.41■□□□□ 0.38
HSPG2-214ENST00000635682 IGHA2P01877 340 aa17.41■□□□□ 0.38
HSPG2-214ENST00000635682 CYBAP13498 195 aa17.41■□□□□ 0.38
HSPG2-214ENST00000635682 IKQ13123 557 aaPredicted RBP17.41■□□□□ 0.38
HSPG2-214ENST00000635682 GJC2Q5T442 439 aaPredicted RBP17.41■□□□□ 0.38
HSPG2-214ENST00000635682 RALYLQ86SE5 291 aaKnown RBP17.41■□□□□ 0.38
HSPG2-214ENST00000635682 SKAP1Q86WV1 359 aa17.41■□□□□ 0.38
HSPG2-214ENST00000635682 UBE2OQ9C0C9 1292 aaKnown RBP17.41■□□□□ 0.38
HSPG2-214ENST00000635682 ANO2Q9NQ90 1003 aa17.41■□□□□ 0.38
HSPG2-214ENST00000635682 FBXO28Q9NVF7 368 aa17.41■□□□□ 0.38
HSPG2-214ENST00000635682 MYCNP04198 464 aaPredicted RBP17.4■□□□□ 0.38
HSPG2-214ENST00000635682 MDM2Q00987 491 aaPredicted RBP17.4■□□□□ 0.38
HSPG2-214ENST00000635682 TMEM132BQ14DG7 1078 aa17.4■□□□□ 0.38
HSPG2-214ENST00000635682 OLFML2BQ68BL8 750 aa17.4■□□□□ 0.38
HSPG2-214ENST00000635682 LRRC47Q8N1G4 583 aaKnown RBP17.4■□□□□ 0.38
HSPG2-214ENST00000635682 ESYT1Q9BSJ8 1104 aa17.4■□□□□ 0.38
HSPG2-214ENST00000635682 MROH8Q9H579 483 aa17.4■□□□□ 0.38
HSPG2-214ENST00000635682 A0A0G2JMZ2 1700 aa17.4■□□□□ 0.38
HSPG2-214ENST00000635682 SMCHD1A6NHR9 2005 aa17.4■□□□□ 0.38
HSPG2-214ENST00000635682 COL11A1P12107 1806 aaPredicted RBP17.4■□□□□ 0.38
HSPG2-214ENST00000635682 PARP14Q460N5 1801 aa17.4■□□□□ 0.38
HSPG2-214ENST00000635682 F5H6K3 240 aa17.39■□□□□ 0.37
HSPG2-214ENST00000635682 MSCO60682 206 aa17.39■□□□□ 0.37
HSPG2-214ENST00000635682 KLRC3Q07444 240 aa17.39■□□□□ 0.37
HSPG2-214ENST00000635682 FAM83BQ5T0W9 1011 aa17.39■□□□□ 0.37
HSPG2-214ENST00000635682 TBC1D10CQ8IV04 446 aa17.39■□□□□ 0.37
HSPG2-214ENST00000635682 UBAC1Q9BSL1 405 aa17.39■□□□□ 0.37
HSPG2-214ENST00000635682 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.39■□□□□ 0.37
HSPG2-214ENST00000635682 INCENPQ9NQS7 918 aa17.39■□□□□ 0.37
HSPG2-214ENST00000635682 MTMR7Q9Y216 660 aa17.39■□□□□ 0.37
HSPG2-214ENST00000635682 IGKV6D-41A0A0C4DH26 115 aa17.38■□□□□ 0.37
HSPG2-214ENST00000635682 FCER1AP12319 257 aa17.38■□□□□ 0.37
HSPG2-214ENST00000635682 SLC1A4P43007 532 aa17.38■□□□□ 0.37
HSPG2-214ENST00000635682 RNF20Q5VTR2 975 aa17.38■□□□□ 0.37
HSPG2-214ENST00000635682 SLFN13Q68D06 897 aa17.38■□□□□ 0.37
HSPG2-214ENST00000635682 TDHQ8IZJ6 230 aa17.38■□□□□ 0.37
HSPG2-214ENST00000635682 SLC5A4Q9NY91 659 aa17.38■□□□□ 0.37
HSPG2-214ENST00000635682 ZNF236Q9UL36 1845 aa17.37■□□□□ 0.37
HSPG2-214ENST00000635682 ERICH2A1L162 156 aa17.37■□□□□ 0.37
HSPG2-214ENST00000635682 DNM1LO00429 736 aa17.37■□□□□ 0.37
HSPG2-214ENST00000635682 KDM4AO75164 1064 aa17.37■□□□□ 0.37
HSPG2-214ENST00000635682 NDUFB10O96000 172 aa17.37■□□□□ 0.37
HSPG2-214ENST00000635682 PGK2P07205 417 aa17.37■□□□□ 0.37
HSPG2-214ENST00000635682 FGRP09769 529 aa17.37■□□□□ 0.37
HSPG2-214ENST00000635682 Q7L0L9 218 aa17.37■□□□□ 0.37
HSPG2-214ENST00000635682 GMCL1P1Q8NEA9 526 aa17.37■□□□□ 0.37
HSPG2-214ENST00000635682 MKL1Q969V6 931 aa17.37■□□□□ 0.37
HSPG2-214ENST00000635682 MAML3Q96JK9 1138 aa17.37■□□□□ 0.37
HSPG2-214ENST00000635682 NUP88Q99567 741 aaPredicted RBP17.37■□□□□ 0.37
HSPG2-214ENST00000635682 ADAMTS5Q9UNA0 930 aa17.37■□□□□ 0.37
HSPG2-214ENST00000635682 B4E1Z4 1266 aa17.36■□□□□ 0.37
HSPG2-214ENST00000635682 VWA5AO00534 786 aa17.36■□□□□ 0.37
HSPG2-214ENST00000635682 SEPT4O43236 478 aa17.36■□□□□ 0.37
HSPG2-214ENST00000635682 SLC25A27O95847 323 aa17.36■□□□□ 0.37
HSPG2-214ENST00000635682 TOP1P11387 765 aaKnown RBP17.36■□□□□ 0.37
HSPG2-214ENST00000635682 STAT3P40763 770 aa17.36■□□□□ 0.37
HSPG2-214ENST00000635682 RTP1P59025 263 aa17.36■□□□□ 0.37
HSPG2-214ENST00000635682 PTH1RQ03431 593 aa17.36■□□□□ 0.37
HSPG2-214ENST00000635682 SART3Q15020 963 aaKnown RBP17.36■□□□□ 0.37
HSPG2-214ENST00000635682 CCDC96Q2M329 555 aa17.36■□□□□ 0.37
HSPG2-214ENST00000635682 LRIT3Q3SXY7 679 aa17.36■□□□□ 0.37
HSPG2-214ENST00000635682 ABRAQ8N0Z2 381 aa17.36■□□□□ 0.37
HSPG2-214ENST00000635682 ARRDC4Q8NCT1 418 aa17.36■□□□□ 0.37
HSPG2-214ENST00000635682 TTC14Q96N46 770 aa17.36■□□□□ 0.37
HSPG2-214ENST00000635682 MMP19Q99542 508 aa17.36■□□□□ 0.37
HSPG2-214ENST00000635682 SLF1Q9BQI6 1058 aa17.36■□□□□ 0.37
HSPG2-214ENST00000635682 IL25Q9H293 177 aa17.36■□□□□ 0.37
HSPG2-214ENST00000635682 TCP11L1Q9NUJ3 509 aa17.36■□□□□ 0.37
HSPG2-214ENST00000635682 FEM1BQ9UK73 627 aa17.36■□□□□ 0.37
HSPG2-214ENST00000635682 PPP1R9AQ9ULJ8 1098 aa17.36■□□□□ 0.37
HSPG2-214ENST00000635682 ATP11BQ9Y2G3 1177 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms