RNA–Protein interactions for RNA: ENST00000627200.1

CHD2-210, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 230 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-210ENST00000627200 LRRC41Q15345 812 aa11.2□□□□□ -0.62
CHD2-210ENST00000627200 LRRFIP1Q32MZ4 808 aaKnown RBP11.2□□□□□ -0.62
CHD2-210ENST00000627200 TDHQ8IZJ6 230 aa11.2□□□□□ -0.62
CHD2-210ENST00000627200 NEDD1Q8NHV4 660 aa11.2□□□□□ -0.62
CHD2-210ENST00000627200 FERMT2Q96AC1 680 aa11.2□□□□□ -0.62
CHD2-210ENST00000627200 NACAP1Q9BZK3 213 aa11.2□□□□□ -0.62
CHD2-210ENST00000627200 RAVER2Q9HCJ3 691 aaKnown RBP11.2□□□□□ -0.62
CHD2-210ENST00000627200 SLC5A4Q9NY91 659 aa11.2□□□□□ -0.62
CHD2-210ENST00000627200 ISY1Q9ULR0 285 aaKnown RBP11.2□□□□□ -0.62
CHD2-210ENST00000627200 ATP11BQ9Y2G3 1177 aa11.2□□□□□ -0.62
CHD2-210ENST00000627200 A0A0D9SFI3 127 aa11.19□□□□□ -0.62
CHD2-210ENST00000627200 KBTBD13C9JR72 458 aa11.19□□□□□ -0.62
CHD2-210ENST00000627200 PGK1P00558 417 aa11.19□□□□□ -0.62
CHD2-210ENST00000627200 ZNF865P0CJ78 1059 aaPredicted RBP11.19□□□□□ -0.62
CHD2-210ENST00000627200 ADCYAP1R1P41586 468 aa11.19□□□□□ -0.62
CHD2-210ENST00000627200 PDE1AP54750 535 aa11.19□□□□□ -0.62
CHD2-210ENST00000627200 PDE4BQ07343 736 aa11.19□□□□□ -0.62
CHD2-210ENST00000627200 HDAC1Q13547 482 aaPredicted RBP11.19□□□□□ -0.62
CHD2-210ENST00000627200 TRIM60Q495X7 471 aa11.19□□□□□ -0.62
CHD2-210ENST00000627200 SLFN13Q68D06 897 aa11.19□□□□□ -0.62
CHD2-210ENST00000627200 Q7L0L9 218 aa11.19□□□□□ -0.62
CHD2-210ENST00000627200 GMCL1P1Q8NEA9 526 aa11.19□□□□□ -0.62
CHD2-210ENST00000627200 FAM227BQ96M60 508 aa11.19□□□□□ -0.62
CHD2-210ENST00000627200 TINF2Q9BSI4 451 aa11.19□□□□□ -0.62
CHD2-210ENST00000627200 SLC38A10Q9HBR0 1119 aa11.19□□□□□ -0.62
CHD2-210ENST00000627200 ZNF287Q9HBT7 754 aa11.19□□□□□ -0.62
CHD2-210ENST00000627200 XPNPEP3Q9NQH7 507 aa11.19□□□□□ -0.62
CHD2-210ENST00000627200 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.19□□□□□ -0.62
CHD2-210ENST00000627200 SMCHD1A6NHR9 2005 aa11.19□□□□□ -0.62
CHD2-210ENST00000627200 MCM3APO60318 1980 aa11.18□□□□□ -0.62
CHD2-210ENST00000627200 COPB2P35606 906 aa11.18□□□□□ -0.62
CHD2-210ENST00000627200 SNAP25P60880 206 aa11.18□□□□□ -0.62
CHD2-210ENST00000627200 IRX5P78411 483 aaPredicted RBP11.18□□□□□ -0.62
CHD2-210ENST00000627200 PRPF38AQ8NAV1 312 aaKnown RBP11.18□□□□□ -0.62
CHD2-210ENST00000627200 ARRDC4Q8NCT1 418 aa11.18□□□□□ -0.62
CHD2-210ENST00000627200 MKL1Q969V6 931 aa11.18□□□□□ -0.62
CHD2-210ENST00000627200 FGD4Q96M96 766 aa11.18□□□□□ -0.62
CHD2-210ENST00000627200 LNPKQ9C0E8 428 aa11.18□□□□□ -0.62
CHD2-210ENST00000627200 PRDM5Q9NQX1 630 aaPredicted RBP11.18□□□□□ -0.62
CHD2-210ENST00000627200 IL17RBQ9NRM6 502 aa11.18□□□□□ -0.62
CHD2-210ENST00000627200 HOMER2Q9NSB8 354 aa11.18□□□□□ -0.62
CHD2-210ENST00000627200 DNAJC25-GNG10A0A024R161 153 aa11.17□□□□□ -0.62
CHD2-210ENST00000627200 TMEM232C9JQI7 657 aa11.17□□□□□ -0.62
CHD2-210ENST00000627200 ATP2A1O14983 1001 aa11.17□□□□□ -0.62
CHD2-210ENST00000627200 ADCY6O43306 1168 aa11.17□□□□□ -0.62
CHD2-210ENST00000627200 ZBED4O75132 1171 aa11.17□□□□□ -0.62
CHD2-210ENST00000627200 SNAI1O95863 264 aaPredicted RBP11.17□□□□□ -0.62
CHD2-210ENST00000627200 SLC3A2P08195 630 aaKnown RBP11.17□□□□□ -0.62
CHD2-210ENST00000627200 RARBP10826 455 aa11.17□□□□□ -0.62
CHD2-210ENST00000627200 BMP3P12645 472 aa11.17□□□□□ -0.62
CHD2-210ENST00000627200 MCCP23508 829 aa11.17□□□□□ -0.62
CHD2-210ENST00000627200 SNX17Q15036 470 aa11.17□□□□□ -0.62
CHD2-210ENST00000627200 SLC39A5Q6ZMH5 540 aa11.17□□□□□ -0.62
CHD2-210ENST00000627200 SH3RF1Q7Z6J0 888 aa11.17□□□□□ -0.62
CHD2-210ENST00000627200 ZNF589Q86UQ0 364 aaPredicted RBP11.17□□□□□ -0.62
CHD2-210ENST00000627200 EVI5LQ96CN4 794 aa11.17□□□□□ -0.62
CHD2-210ENST00000627200 DDX11Q96FC9 970 aa11.17□□□□□ -0.62
CHD2-210ENST00000627200 ZBTB47Q9UFB7 747 aaPredicted RBP11.17□□□□□ -0.62
CHD2-210ENST00000627200 FEM1BQ9UK73 627 aa11.17□□□□□ -0.62
CHD2-210ENST00000627200 ZHX1Q9UKY1 873 aaPredicted RBP11.17□□□□□ -0.62
CHD2-210ENST00000627200 STX8Q9UNK0 236 aa11.17□□□□□ -0.62
CHD2-210ENST00000627200 MTMR7Q9Y216 660 aa11.17□□□□□ -0.62
CHD2-210ENST00000627200 DIS3Q9Y2L1 958 aaKnown RBP11.17□□□□□ -0.62
CHD2-210ENST00000627200 DDX49Q9Y6V7 483 aaKnown RBP11.17□□□□□ -0.62
CHD2-210ENST00000627200 LRRC37A2A6NM11 1700 aa11.17□□□□□ -0.62
CHD2-210ENST00000627200 ZNF536O15090 1300 aa11.16□□□□□ -0.62
CHD2-210ENST00000627200 SYNRGQ9UMZ2 1314 aa11.16□□□□□ -0.62
CHD2-210ENST00000627200 MYADML2A6NDP7 307 aa11.16□□□□□ -0.62
CHD2-210ENST00000627200 TSPY2A6NKD2 308 aa11.16□□□□□ -0.62
CHD2-210ENST00000627200 ADAMTS4O75173 837 aa11.16□□□□□ -0.62
CHD2-210ENST00000627200 AKR1A1P14550 325 aa11.16□□□□□ -0.62
CHD2-210ENST00000627200 SLC1A4P43007 532 aa11.16□□□□□ -0.62
CHD2-210ENST00000627200 STAT2P52630 851 aa11.16□□□□□ -0.62
CHD2-210ENST00000627200 NMIQ13287 307 aaPredicted RBP11.16□□□□□ -0.62
CHD2-210ENST00000627200 LRIT3Q3SXY7 679 aa11.16□□□□□ -0.62
CHD2-210ENST00000627200 B4GALNT3Q6L9W6 998 aa11.16□□□□□ -0.62
CHD2-210ENST00000627200 KCTD1Q719H9 257 aa11.16□□□□□ -0.62
CHD2-210ENST00000627200 GMCL1Q96IK5 515 aa11.16□□□□□ -0.62
CHD2-210ENST00000627200 AGBL1Q96MI9 1066 aa11.16□□□□□ -0.62
CHD2-210ENST00000627200 PDLIM7Q9NR12 457 aa11.16□□□□□ -0.62
CHD2-210ENST00000627200 NRBP1Q9UHY1 535 aa11.16□□□□□ -0.62
CHD2-210ENST00000627200 SYNPO2Q9UMS6 1093 aa11.16□□□□□ -0.62
CHD2-210ENST00000627200 PHF24Q9UPV7 400 aa11.16□□□□□ -0.62
CHD2-210ENST00000627200 CNPY2Q9Y2B0 182 aa11.16□□□□□ -0.62
CHD2-210ENST00000627200 CTDP1Q9Y5B0 961 aaPredicted RBP11.16□□□□□ -0.62
CHD2-210ENST00000627200 COL6A3P12111 3177 aa11.16□□□□□ -0.62
CHD2-210ENST00000627200 LCTP09848 1927 aa11.15□□□□□ -0.62
CHD2-210ENST00000627200 SYNGAP1Q96PV0 1343 aa11.15□□□□□ -0.62
CHD2-210ENST00000627200 A0A1W2PQ45 241 aaPredicted RBP11.15□□□□□ -0.62
CHD2-210ENST00000627200 A0A1W2PQY0 241 aa11.15□□□□□ -0.62
CHD2-210ENST00000627200 TRIM43BA6NCK2 446 aa11.15□□□□□ -0.62
CHD2-210ENST00000627200 RANBP6O60518 1105 aaKnown RBP11.15□□□□□ -0.62
CHD2-210ENST00000627200 IGHDP01880 384 aa11.15□□□□□ -0.62
CHD2-210ENST00000627200 PTGS1P23219 599 aa11.15□□□□□ -0.62
CHD2-210ENST00000627200 HAND2P61296 217 aa11.15□□□□□ -0.62
CHD2-210ENST00000627200 CNTN2Q02246 1040 aa11.15□□□□□ -0.62
CHD2-210ENST00000627200 IKQ13123 557 aaPredicted RBP11.15□□□□□ -0.62
CHD2-210ENST00000627200 RRP12Q5JTH9 1297 aaKnown RBP11.15□□□□□ -0.62
CHD2-210ENST00000627200 CCDC174Q6PII3 467 aa11.15□□□□□ -0.62
CHD2-210ENST00000627200 ANKRD35Q8N283 1001 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms