RNA–Protein interactions for RNA: ENST00000624032.3

ATRX-213, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 3,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-213ENST00000624032 HERC5Q9UII4 1024 aaKnown RBP13.22□□□□□ -0.29
ATRX-213ENST00000624032 CFAP45Q9UL16 551 aa13.22□□□□□ -0.29
ATRX-213ENST00000624032 POTECB2RU33 542 aa13.21□□□□□ -0.29
ATRX-213ENST00000624032 FDPSP14324 419 aaKnown RBP13.21□□□□□ -0.29
ATRX-213ENST00000624032 CCZ1BP86790 482 aa13.21□□□□□ -0.29
ATRX-213ENST00000624032 CCZ1P86791 482 aaPredicted RBP13.21□□□□□ -0.29
ATRX-213ENST00000624032 FILIP1Q7Z7B0 1213 aa13.21□□□□□ -0.29
ATRX-213ENST00000624032 SMARCC2Q8TAQ2 1214 aa13.21□□□□□ -0.29
ATRX-213ENST00000624032 L3MBTL3Q96JM7 780 aaPredicted RBP13.21□□□□□ -0.29
ATRX-213ENST00000624032 EPHX2P34913 555 aa13.21□□□□□ -0.29
ATRX-213ENST00000624032 RESTQ13127 1097 aa13.21□□□□□ -0.29
ATRX-213ENST00000624032 NTRK3Q16288 839 aa13.21□□□□□ -0.29
ATRX-213ENST00000624032 CCDC17Q96LX7 622 aa13.21□□□□□ -0.29
ATRX-213ENST00000624032 TIGD1Q96MW7 591 aa13.21□□□□□ -0.29
ATRX-213ENST00000624032 KCND1Q9NSA2 647 aa13.21□□□□□ -0.29
ATRX-213ENST00000624032 PLIN4Q96Q06 1357 aa13.21□□□□□ -0.3
ATRX-213ENST00000624032 PLEKHA8P1O95397 391 aa13.21□□□□□ -0.3
ATRX-213ENST00000624032 APOBEC3FQ8IUX4 373 aaKnown RBP13.21□□□□□ -0.3
ATRX-213ENST00000624032 LLPHQ9BRT6 129 aaKnown RBP13.21□□□□□ -0.3
ATRX-213ENST00000624032 ZSCAN16Q9H4T2 348 aaPredicted RBP13.21□□□□□ -0.3
ATRX-213ENST00000624032 ADM5C9JUS6 153 aa13.2□□□□□ -0.3
ATRX-213ENST00000624032 H3BQV1 296 aa13.2□□□□□ -0.3
ATRX-213ENST00000624032 EAPPQ56P03 285 aaPredicted RBP13.2□□□□□ -0.3
ATRX-213ENST00000624032 CCDC178Q5BJE1 867 aa13.2□□□□□ -0.3
ATRX-213ENST00000624032 IFFO2Q5TF58 517 aa13.2□□□□□ -0.3
ATRX-213ENST00000624032 CCDC84Q86UT8 332 aaPredicted RBP13.2□□□□□ -0.3
ATRX-213ENST00000624032 SIAH1Q8IUQ4 282 aa13.2□□□□□ -0.3
ATRX-213ENST00000624032 GREB1LQ9C091 1923 aaPredicted RBP13.2□□□□□ -0.3
ATRX-213ENST00000624032 BAZ2BQ9UIF8 2168 aaKnown RBP13.2□□□□□ -0.3
ATRX-213ENST00000624032 hCG_1642624A0A1W2PR95 340 aa13.2□□□□□ -0.3
ATRX-213ENST00000624032 DHX16O60231 1041 aaKnown RBP13.2□□□□□ -0.3
ATRX-213ENST00000624032 GOLGA8HP0CJ92 632 aa13.2□□□□□ -0.3
ATRX-213ENST00000624032 EEF2P13639 858 aaKnown RBP13.2□□□□□ -0.3
ATRX-213ENST00000624032 NT5C2P49902 561 aa13.2□□□□□ -0.3
ATRX-213ENST00000624032 GSDMDP57764 484 aa13.2□□□□□ -0.3
ATRX-213ENST00000624032 STAG2Q8N3U4 1231 aa13.2□□□□□ -0.3
ATRX-213ENST00000624032 AIFM3Q96NN9 605 aa13.2□□□□□ -0.3
ATRX-213ENST00000624032 GJB4Q9NTQ9 266 aa13.2□□□□□ -0.3
ATRX-213ENST00000624032 CALCOCO1Q9P1Z2 691 aa13.2□□□□□ -0.3
ATRX-213ENST00000624032 DDAH1O94760 285 aa13.19□□□□□ -0.3
ATRX-213ENST00000624032 TOP1P11387 765 aaKnown RBP13.19□□□□□ -0.3
ATRX-213ENST00000624032 NOVP48745 357 aa13.19□□□□□ -0.3
ATRX-213ENST00000624032 PRKG1Q13976 671 aa13.19□□□□□ -0.3
ATRX-213ENST00000624032 ORC3Q9UBD5 711 aaPredicted RBP13.19□□□□□ -0.3
ATRX-213ENST00000624032 TBC1D12O60347 775 aa13.19□□□□□ -0.3
ATRX-213ENST00000624032 TTLL1O95922 423 aa13.19□□□□□ -0.3
ATRX-213ENST00000624032 BMS1Q14692 1282 aaKnown RBP13.19□□□□□ -0.3
ATRX-213ENST00000624032 SLC26A6Q9BXS9 759 aa13.19□□□□□ -0.3
ATRX-213ENST00000624032 CPVLQ9H3G5 476 aa13.19□□□□□ -0.3
ATRX-213ENST00000624032 TAF1DQ9H5J8 278 aaPredicted RBP13.19□□□□□ -0.3
ATRX-213ENST00000624032 ANO10Q9NW15 660 aa13.19□□□□□ -0.3
ATRX-213ENST00000624032 ZC3H4Q9UPT8 1303 aaKnown RBP13.19□□□□□ -0.3
ATRX-213ENST00000624032 USP17L5A8MUK1 530 aa13.19□□□□□ -0.3
ATRX-213ENST00000624032 PHF20L1A8MW92 1017 aa13.19□□□□□ -0.3
ATRX-213ENST00000624032 RAD21O60216 631 aa13.19□□□□□ -0.3
ATRX-213ENST00000624032 CDK11BP21127 795 aaKnown RBP13.19□□□□□ -0.3
ATRX-213ENST00000624032 GUCY1B3Q02153 619 aa13.19□□□□□ -0.3
ATRX-213ENST00000624032 OTUD7BQ6GQQ9 843 aa13.19□□□□□ -0.3
ATRX-213ENST00000624032 USP17L2Q6R6M4 530 aa13.19□□□□□ -0.3
ATRX-213ENST00000624032 TMEM179Q6ZVK1 233 aa13.19□□□□□ -0.3
ATRX-213ENST00000624032 NBPF11Q86T75 865 aa13.19□□□□□ -0.3
ATRX-213ENST00000624032 CTCFLQ8NI51 663 aaPredicted RBP13.19□□□□□ -0.3
ATRX-213ENST00000624032 NID2Q14112 1375 aa13.18□□□□□ -0.3
ATRX-213ENST00000624032 MYH4Q9Y623 1939 aa13.18□□□□□ -0.3
ATRX-213ENST00000624032 ERICH4A6NGS2 130 aa13.18□□□□□ -0.3
ATRX-213ENST00000624032 POTEIP0CG38 1075 aa13.18□□□□□ -0.3
ATRX-213ENST00000624032 POTEJP0CG39 1038 aa13.18□□□□□ -0.3
ATRX-213ENST00000624032 MAP3K10Q02779 954 aa13.18□□□□□ -0.3
ATRX-213ENST00000624032 ICA1Q05084 483 aa13.18□□□□□ -0.3
ATRX-213ENST00000624032 CCDC73Q6ZRK6 1079 aa13.18□□□□□ -0.3
ATRX-213ENST00000624032 CCAR1Q8IX12 1150 aaKnown RBP13.18□□□□□ -0.3
ATRX-213ENST00000624032 SRBD1Q8N5C6 995 aaKnown RBP13.18□□□□□ -0.3
ATRX-213ENST00000624032 DCPSQ96C86 337 aaKnown RBP13.18□□□□□ -0.3
ATRX-213ENST00000624032 CABP5Q9NP86 173 aa13.18□□□□□ -0.3
ATRX-213ENST00000624032 CALM1P0DP23 149 aa13.18□□□□□ -0.3
ATRX-213ENST00000624032 CALM2P0DP24 149 aa13.18□□□□□ -0.3
ATRX-213ENST00000624032 CALM3P0DP25 149 aa13.18□□□□□ -0.3
ATRX-213ENST00000624032 CAP2P40123 477 aa13.18□□□□□ -0.3
ATRX-213ENST00000624032 SNW1Q13573 536 aaKnown RBP13.18□□□□□ -0.3
ATRX-213ENST00000624032 DHX40Q8IX18 779 aaKnown RBP13.18□□□□□ -0.3
ATRX-213ENST00000624032 CEP57L1Q8IYX8 460 aa13.18□□□□□ -0.3
ATRX-213ENST00000624032 KANSL2Q9H9L4 492 aa13.18□□□□□ -0.3
ATRX-213ENST00000624032 ZNF446Q9NWS9 450 aa13.18□□□□□ -0.3
ATRX-213ENST00000624032 ZBTB21Q9ULJ3 1066 aa13.18□□□□□ -0.3
ATRX-213ENST00000624032 FRMPD2Q68DX3 1309 aaPredicted RBP13.17□□□□□ -0.3
ATRX-213ENST00000624032 KINO60870 393 aaKnown RBP13.17□□□□□ -0.3
ATRX-213ENST00000624032 INPP5BP32019 993 aa13.17□□□□□ -0.3
ATRX-213ENST00000624032 GRM4Q14833 912 aa13.17□□□□□ -0.3
ATRX-213ENST00000624032 MAD2L2Q9UI95 211 aa13.17□□□□□ -0.3
ATRX-213ENST00000624032 A0A1W2PRG0 241 aa13.17□□□□□ -0.3
ATRX-213ENST00000624032 H2AFXP16104 143 aaPredicted RBP13.17□□□□□ -0.3
ATRX-213ENST00000624032 IFNAR1P17181 557 aa13.17□□□□□ -0.3
ATRX-213ENST00000624032 ECE1P42892 770 aa13.17□□□□□ -0.3
ATRX-213ENST00000624032 RCAN1P53805 252 aa13.17□□□□□ -0.3
ATRX-213ENST00000624032 IRX5P78411 483 aaPredicted RBP13.17□□□□□ -0.3
ATRX-213ENST00000624032 CEBPZQ03701 1054 aaKnown RBP13.17□□□□□ -0.3
ATRX-213ENST00000624032 FUT2Q10981 343 aa13.17□□□□□ -0.3
ATRX-213ENST00000624032 SLC35G1Q2M3R5 365 aa13.17□□□□□ -0.3
ATRX-213ENST00000624032 CPLX2Q6PUV4 134 aaKnown RBP13.17□□□□□ -0.3
ATRX-213ENST00000624032 TMTC3Q6ZXV5 915 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms