RNA–Protein interactions for RNA: ENST00000621573.1

TARDBP-224, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-224ENST00000621573 SMNDC1O75940 238 aaKnown RBP eCLIP10.18□□□□□ -0.78
TARDBP-224ENST00000621573 ALDH1B1P30837 517 aa10.18□□□□□ -0.78
TARDBP-224ENST00000621573 FMR1Q06787 632 aaKnown RBP eCLIP10.18□□□□□ -0.78
TARDBP-224ENST00000621573 GDF6Q6KF10 455 aaPredicted RBP10.18□□□□□ -0.78
TARDBP-224ENST00000621573 HHIPQ96QV1 700 aa10.18□□□□□ -0.78
TARDBP-224ENST00000621573 PLVAPQ9BX97 442 aa10.18□□□□□ -0.78
TARDBP-224ENST00000621573 C9orf78Q9NZ63 289 aaPredicted RBP10.18□□□□□ -0.78
TARDBP-224ENST00000621573 NUP98P52948 1817 aa10.18□□□□□ -0.78
TARDBP-224ENST00000621573 ANKRD33BA6NCL7 494 aa10.17□□□□□ -0.78
TARDBP-224ENST00000621573 RNF225M0QZC1 329 aaPredicted RBP10.17□□□□□ -0.78
TARDBP-224ENST00000621573 PDE8AO60658 829 aa10.17□□□□□ -0.78
TARDBP-224ENST00000621573 IRS1P35568 1242 aa10.17□□□□□ -0.78
TARDBP-224ENST00000621573 CRY2Q49AN0 593 aa10.17□□□□□ -0.78
TARDBP-224ENST00000621573 ZKSCAN2Q63HK3 967 aa10.17□□□□□ -0.78
TARDBP-224ENST00000621573 ADAMTSL4Q6UY14 1074 aa10.17□□□□□ -0.78
TARDBP-224ENST00000621573 ARHGAP27Q6ZUM4 889 aa10.17□□□□□ -0.78
TARDBP-224ENST00000621573 DDX46Q7L014 1031 aaKnown RBP10.17□□□□□ -0.78
TARDBP-224ENST00000621573 ARHGAP45Q92619 1136 aa10.17□□□□□ -0.78
TARDBP-224ENST00000621573 CCDC74AQ96AQ1 378 aa10.17□□□□□ -0.78
TARDBP-224ENST00000621573 POP1Q99575 1024 aaKnown RBP10.17□□□□□ -0.78
TARDBP-224ENST00000621573 RCAN3Q9UKA8 241 aa10.17□□□□□ -0.78
TARDBP-224ENST00000621573 CDHR2Q9BYE9 1310 aa10.16□□□□□ -0.78
TARDBP-224ENST00000621573 PNMA6FA0A0J9YX94 578 aa10.16□□□□□ -0.78
TARDBP-224ENST00000621573 GRM8O00222 908 aa10.16□□□□□ -0.78
TARDBP-224ENST00000621573 COL8A1P27658 744 aa10.16□□□□□ -0.78
TARDBP-224ENST00000621573 MAPK8P45983 427 aa10.16□□□□□ -0.78
TARDBP-224ENST00000621573 CCT4P50991 539 aaKnown RBP10.16□□□□□ -0.78
TARDBP-224ENST00000621573 ENOX2Q16206 610 aaKnown RBP10.16□□□□□ -0.78
TARDBP-224ENST00000621573 PRPF40BQ6NWY9 871 aaKnown RBP10.16□□□□□ -0.78
TARDBP-224ENST00000621573 ATF7IPQ6VMQ6 1270 aa10.16□□□□□ -0.78
TARDBP-224ENST00000621573 CRAMP1Q96RY5 1269 aa10.16□□□□□ -0.78
TARDBP-224ENST00000621573 NPHS2Q9NP85 383 aa10.16□□□□□ -0.78
TARDBP-224ENST00000621573 AFDNP55196 1824 aaKnown RBP10.16□□□□□ -0.78
TARDBP-224ENST00000621573 NRXN2Q9P2S2 1712 aa10.16□□□□□ -0.78
TARDBP-224ENST00000621573 A0A1W2PP55 124 aa10.15□□□□□ -0.78
TARDBP-224ENST00000621573 PDE2AO00408 941 aaPredicted RBP10.15□□□□□ -0.78
TARDBP-224ENST00000621573 P4HBP07237 508 aaKnown RBP10.15□□□□□ -0.78
TARDBP-224ENST00000621573 TRIM27P14373 513 aa10.15□□□□□ -0.78
TARDBP-224ENST00000621573 HOXA10P31260 410 aaPredicted RBP10.15□□□□□ -0.78
TARDBP-224ENST00000621573 SF3B3Q15393 1217 aaKnown RBP10.15□□□□□ -0.78
TARDBP-224ENST00000621573 CCDC152Q4G0S7 254 aa10.15□□□□□ -0.78
TARDBP-224ENST00000621573 TMCO4Q5TGY1 634 aa10.15□□□□□ -0.78
TARDBP-224ENST00000621573 DMRTC2Q8IXT2 367 aaPredicted RBP10.15□□□□□ -0.78
TARDBP-224ENST00000621573 FTSJ3Q8IY81 847 aaKnown RBP10.15□□□□□ -0.78
TARDBP-224ENST00000621573 TMEM102Q8N9M5 508 aaPredicted RBP10.15□□□□□ -0.78
TARDBP-224ENST00000621573 LACRTQ9GZZ8 138 aa10.15□□□□□ -0.78
TARDBP-224ENST00000621573 TMX4Q9H1E5 349 aaPredicted RBP10.15□□□□□ -0.78
TARDBP-224ENST00000621573 RIC1Q4ADV7 1423 aa10.15□□□□□ -0.79
TARDBP-224ENST00000621573 CACNA1FO60840 1977 aa10.14□□□□□ -0.79
TARDBP-224ENST00000621573 GSK3AP49840 483 aa10.14□□□□□ -0.79
TARDBP-224ENST00000621573 CTSWP56202 376 aa10.14□□□□□ -0.79
TARDBP-224ENST00000621573 GRAPQ13588 217 aa10.14□□□□□ -0.79
TARDBP-224ENST00000621573 WFDC8Q8IUA0 241 aa10.14□□□□□ -0.79
TARDBP-224ENST00000621573 IL22RA1Q8N6P7 574 aa10.14□□□□□ -0.79
TARDBP-224ENST00000621573 GRAPLQ8TC17 118 aaPredicted RBP10.14□□□□□ -0.79
TARDBP-224ENST00000621573 NXPE3Q969Y0 559 aa10.14□□□□□ -0.79
TARDBP-224ENST00000621573 NOP53Q9NZM5 478 aaKnown RBP10.14□□□□□ -0.79
TARDBP-224ENST00000621573 TNNQ9UQP3 1299 aa10.14□□□□□ -0.79
TARDBP-224ENST00000621573 ARFGEF2Q9Y6D5 1785 aa10.14□□□□□ -0.79
TARDBP-224ENST00000621573 ABCC4O15439 1325 aa10.13□□□□□ -0.79
TARDBP-224ENST00000621573 BBOX1O75936 387 aa10.13□□□□□ -0.79
TARDBP-224ENST00000621573 CASP7P55210 303 aa10.13□□□□□ -0.79
TARDBP-224ENST00000621573 KCNMA1Q12791 1236 aa10.13□□□□□ -0.79
TARDBP-224ENST00000621573 CCDC93Q567U6 631 aa10.13□□□□□ -0.79
TARDBP-224ENST00000621573 SOGA3Q5TF21 947 aa10.13□□□□□ -0.79
TARDBP-224ENST00000621573 DZIP1LQ8IYY4 767 aaKnown RBP10.13□□□□□ -0.79
TARDBP-224ENST00000621573 TTLL11Q8NHH1 800 aa10.13□□□□□ -0.79
TARDBP-224ENST00000621573 EPS8L3Q8TE67 593 aaKnown RBP10.13□□□□□ -0.79
TARDBP-224ENST00000621573 SUCLG2Q96I99 432 aa10.13□□□□□ -0.79
TARDBP-224ENST00000621573 PLA2G12BQ9BX93 195 aa10.13□□□□□ -0.79
TARDBP-224ENST00000621573 SEC31BQ9NQW1 1179 aa10.13□□□□□ -0.79
TARDBP-224ENST00000621573 N4BP2Q86UW6 1770 aaPredicted RBP10.13□□□□□ -0.79
TARDBP-224ENST00000621573 KIF13BQ9NQT8 1826 aa10.12□□□□□ -0.79
TARDBP-224ENST00000621573 NBPF7P0C2Y1 421 aaPredicted RBP10.12□□□□□ -0.79
TARDBP-224ENST00000621573 UBTFL1P0CB47 393 aaPredicted RBP10.12□□□□□ -0.79
TARDBP-224ENST00000621573 RPS8P62241 208 aaKnown RBP10.12□□□□□ -0.79
TARDBP-224ENST00000621573 KIAA0319Q5VV43 1072 aa10.12□□□□□ -0.79
TARDBP-224ENST00000621573 INTS3Q68E01 1043 aaKnown RBP10.12□□□□□ -0.79
TARDBP-224ENST00000621573 LMBR1LQ6UX01 489 aa10.12□□□□□ -0.79
TARDBP-224ENST00000621573 OLFM4Q6UX06 510 aa10.12□□□□□ -0.79
TARDBP-224ENST00000621573 NPAS4Q8IUM7 802 aa10.12□□□□□ -0.79
TARDBP-224ENST00000621573 ANKRD18AQ8IVF6 992 aa10.12□□□□□ -0.79
TARDBP-224ENST00000621573 CACTIN-AS1Q8N1I8 211 aa10.12□□□□□ -0.79
TARDBP-224ENST00000621573 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.12□□□□□ -0.79
TARDBP-224ENST00000621573 CELF1Q92879 486 aaKnown RBP10.12□□□□□ -0.79
TARDBP-224ENST00000621573 CDC5LQ99459 802 aaKnown RBP10.12□□□□□ -0.79
TARDBP-224ENST00000621573 USP44Q9H0E7 712 aa10.12□□□□□ -0.79
TARDBP-224ENST00000621573 HDAC5Q9UQL6 1122 aa10.12□□□□□ -0.79
TARDBP-224ENST00000621573 ANKRD36CQ5JPF3 1778 aa10.11□□□□□ -0.79
TARDBP-224ENST00000621573 SPDYE3A6NKU9 549 aa10.11□□□□□ -0.79
TARDBP-224ENST00000621573 FAM229AH3BQW9 127 aa10.11□□□□□ -0.79
TARDBP-224ENST00000621573 PLIN1O60240 522 aa10.11□□□□□ -0.79
TARDBP-224ENST00000621573 PTPRAP18433 802 aa10.11□□□□□ -0.79
TARDBP-224ENST00000621573 CDC27P30260 824 aa10.11□□□□□ -0.79
TARDBP-224ENST00000621573 FOXO4P98177 505 aa10.11□□□□□ -0.79
TARDBP-224ENST00000621573 RASSF7Q02833 373 aa10.11□□□□□ -0.79
TARDBP-224ENST00000621573 PI16Q6UXB8 463 aa10.11□□□□□ -0.79
TARDBP-224ENST00000621573 ITPRIPQ8IWB1 547 aa10.11□□□□□ -0.79
TARDBP-224ENST00000621573 RTKN2Q8IZC4 609 aa10.11□□□□□ -0.79
TARDBP-224ENST00000621573 TMEM57Q8N5G2 664 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms