RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 CCDC178Q5BJE1 867 aa29.32■■■□□ 2.28
PMS1-220ENST00000618056 FAM160B2Q86V87 743 aa29.32■■■□□ 2.28
PMS1-220ENST00000618056 NCAPG2Q86XI2 1143 aa29.32■■■□□ 2.28
PMS1-220ENST00000618056 ABRAQ8N0Z2 381 aa29.32■■■□□ 2.28
PMS1-220ENST00000618056 CHURC1Q8WUH1 139 aa29.32■■■□□ 2.28
PMS1-220ENST00000618056 KRT23Q9C075 422 aa29.32■■■□□ 2.28
PMS1-220ENST00000618056 FDX1P10109 184 aa29.31■■■□□ 2.28
PMS1-220ENST00000618056 ERICH6BQ5W0A0 696 aa29.31■■■□□ 2.28
PMS1-220ENST00000618056 DCAF4Q8WV16 495 aa29.31■■■□□ 2.28
PMS1-220ENST00000618056 MAP4K1Q92918 833 aa29.31■■■□□ 2.28
PMS1-220ENST00000618056 KIFC2Q96AC6 838 aa29.31■■■□□ 2.28
PMS1-220ENST00000618056 TEX13BQ9BXU2 312 aa29.31■■■□□ 2.28
PMS1-220ENST00000618056 SLC38A10Q9HBR0 1119 aa29.31■■■□□ 2.28
PMS1-220ENST00000618056 PLXNA1Q9UIW2 1896 aa29.31■■■□□ 2.28
PMS1-220ENST00000618056 B4E1Z4 1266 aa29.3■■■□□ 2.28
PMS1-220ENST00000618056 ZBED4O75132 1171 aa29.3■■■□□ 2.28
PMS1-220ENST00000618056 ZKSCAN1P17029 563 aaPredicted RBP29.3■■■□□ 2.28
PMS1-220ENST00000618056 IQCA1Q86XH1 822 aa29.3■■■□□ 2.28
PMS1-220ENST00000618056 DGKHQ86XP1 1220 aa29.3■■■□□ 2.28
PMS1-220ENST00000618056 CYP21A2P08686 494 aa29.29■■■□□ 2.28
PMS1-220ENST00000618056 ADORA2AP29274 412 aa29.29■■■□□ 2.28
PMS1-220ENST00000618056 GJA8P48165 433 aa29.29■■■□□ 2.28
PMS1-220ENST00000618056 MAP3K21Q5TCX8 1036 aa29.29■■■□□ 2.28
PMS1-220ENST00000618056 ESYT1Q9BSJ8 1104 aa29.29■■■□□ 2.28
PMS1-220ENST00000618056 PAK6Q9NQU5 681 aaPredicted RBP29.29■■■□□ 2.28
PMS1-220ENST00000618056 OAZ1P54368 228 aa29.29■■■□□ 2.28
PMS1-220ENST00000618056 ZSWIM5Q9P217 1185 aa29.29■■■□□ 2.28
PMS1-220ENST00000618056 ISY1Q9ULR0 285 aaKnown RBP29.29■■■□□ 2.28
PMS1-220ENST00000618056 RPTORQ8N122 1335 aa29.28■■■□□ 2.28
PMS1-220ENST00000618056 FCER1AP12319 257 aa29.28■■■□□ 2.28
PMS1-220ENST00000618056 TRIM32Q13049 653 aa29.28■■■□□ 2.28
PMS1-220ENST00000618056 CCL14Q16627 93 aa29.28■■■□□ 2.28
PMS1-220ENST00000618056 KCTD1Q719H9 257 aa29.28■■■□□ 2.28
PMS1-220ENST00000618056 RASGRP2Q7LDG7 609 aa29.28■■■□□ 2.28
PMS1-220ENST00000618056 ANKS1AQ92625 1134 aa29.28■■■□□ 2.28
PMS1-220ENST00000618056 ZKSCAN3Q9BRR0 538 aa29.28■■■□□ 2.28
PMS1-220ENST00000618056 SNRNP48Q6IEG0 339 aaKnown RBP29.27■■■□□ 2.28
PMS1-220ENST00000618056 KIAA1211Q6ZU35 1233 aa29.27■■■□□ 2.28
PMS1-220ENST00000618056 CTDP1Q9Y5B0 961 aaPredicted RBP29.27■■■□□ 2.28
PMS1-220ENST00000618056 CAPN2P17655 700 aa29.26■■■□□ 2.27
PMS1-220ENST00000618056 DPP9Q86TI2 863 aa29.26■■■□□ 2.27
PMS1-220ENST00000618056 NPLOC4Q8TAT6 608 aa29.26■■■□□ 2.27
PMS1-220ENST00000618056 SHISA4Q96DD7 197 aa29.26■■■□□ 2.27
PMS1-220ENST00000618056 ZSCAN10Q96SZ4 725 aaPredicted RBP29.26■■■□□ 2.27
PMS1-220ENST00000618056 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.26■■■□□ 2.27
PMS1-220ENST00000618056 SMCHD1A6NHR9 2005 aa29.26■■■□□ 2.27
PMS1-220ENST00000618056 IGHA2P01877 340 aa29.25■■■□□ 2.27
PMS1-220ENST00000618056 PDHBP11177 359 aa29.25■■■□□ 2.27
PMS1-220ENST00000618056 PRKAR2AP13861 404 aaKnown RBP29.25■■■□□ 2.27
PMS1-220ENST00000618056 IKQ13123 557 aaPredicted RBP29.25■■■□□ 2.27
PMS1-220ENST00000618056 BTNL9Q6UXG8 535 aa29.25■■■□□ 2.27
PMS1-220ENST00000618056 CPXCR1Q8N123 301 aa29.25■■■□□ 2.27
PMS1-220ENST00000618056 U2AF1L4Q8WU68 220 aaKnown RBP29.25■■■□□ 2.27
PMS1-220ENST00000618056 CHMP4CQ96CF2 233 aa29.25■■■□□ 2.27
PMS1-220ENST00000618056 LSG1Q9H089 658 aaKnown RBP29.25■■■□□ 2.27
PMS1-220ENST00000618056 HMX1Q9NP08 348 aaPredicted RBP29.25■■■□□ 2.27
PMS1-220ENST00000618056 SLC5A4Q9NY91 659 aa29.25■■■□□ 2.27
PMS1-220ENST00000618056 FLRT1Q9NZU1 646 aa29.25■■■□□ 2.27
PMS1-220ENST00000618056 MTMR7Q9Y216 660 aa29.25■■■□□ 2.27
PMS1-220ENST00000618056 COBLO75128 1261 aa29.24■■■□□ 2.27
PMS1-220ENST00000618056 SGPL1O95470 568 aa29.24■■■□□ 2.27
PMS1-220ENST00000618056 SNHG28P0DPA3 235 aa29.24■■■□□ 2.27
PMS1-220ENST00000618056 TRDNQ13061 729 aa29.24■■■□□ 2.27
PMS1-220ENST00000618056 CCDC96Q2M329 555 aa29.24■■■□□ 2.27
PMS1-220ENST00000618056 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.24■■■□□ 2.27
PMS1-220ENST00000618056 ENAHQ8N8S7 591 aaPredicted RBP29.24■■■□□ 2.27
PMS1-220ENST00000618056 RIPK3Q9Y572 518 aa29.24■■■□□ 2.27
PMS1-220ENST00000618056 RBM8AQ9Y5S9 174 aaKnown RBP29.24■■■□□ 2.27
PMS1-220ENST00000618056 CACNB2Q08289 660 aaPredicted RBP29.23■■■□□ 2.27
PMS1-220ENST00000618056 OLFML2BQ68BL8 750 aa29.23■■■□□ 2.27
PMS1-220ENST00000618056 MMP19Q99542 508 aa29.23■■■□□ 2.27
PMS1-220ENST00000618056 RAVER2Q9HCJ3 691 aaKnown RBP29.23■■■□□ 2.27
PMS1-220ENST00000618056 PPP4R2Q9NY27 417 aa29.23■■■□□ 2.27
PMS1-220ENST00000618056 PRR12Q9ULL5 1215 aa29.23■■■□□ 2.27
PMS1-220ENST00000618056 TNKSO95271 1327 aa29.23■■■□□ 2.27
PMS1-220ENST00000618056 KCTD2Q14681 263 aa29.23■■■□□ 2.27
PMS1-220ENST00000618056 DEFB118Q96PH6 123 aa29.23■■■□□ 2.27
PMS1-220ENST00000618056 UBAC1Q9BSL1 405 aa29.23■■■□□ 2.27
PMS1-220ENST00000618056 MFSD14CQ5VZR4 134 aa29.22■■■□□ 2.27
PMS1-220ENST00000618056 PNMA1Q8ND90 353 aa29.22■■■□□ 2.27
PMS1-220ENST00000618056 CRISPLD2Q9H0B8 497 aa29.22■■■□□ 2.27
PMS1-220ENST00000618056 E7EWF7 191 aa29.21■■■□□ 2.27
PMS1-220ENST00000618056 CDC45O75419 566 aa29.21■■■□□ 2.27
PMS1-220ENST00000618056 ZNF543Q08ER8 600 aa29.21■■■□□ 2.27
PMS1-220ENST00000618056 KAT14Q9H8E8 782 aa29.21■■■□□ 2.27
PMS1-220ENST00000618056 FBXO40Q9UH90 709 aa29.21■■■□□ 2.27
PMS1-220ENST00000618056 TAF6LQ9Y6J9 622 aa29.21■■■□□ 2.27
PMS1-220ENST00000618056 FRMPD3Q5JV73 1810 aa29.2■■■□□ 2.27
PMS1-220ENST00000618056 ZNF536O15090 1300 aa29.2■■■□□ 2.27
PMS1-220ENST00000618056 TTBK2Q6IQ55 1244 aa29.2■■■□□ 2.26
PMS1-220ENST00000618056 CASC1Q6TDU7 716 aa29.2■■■□□ 2.26
PMS1-220ENST00000618056 CYB5R4Q7L1T6 521 aa29.2■■■□□ 2.26
PMS1-220ENST00000618056 CHST13Q8NET6 341 aa29.2■■■□□ 2.26
PMS1-220ENST00000618056 DIS3Q9Y2L1 958 aaKnown RBP29.2■■■□□ 2.26
PMS1-220ENST00000618056 SEC23AQ15436 765 aa29.19■■■□□ 2.26
PMS1-220ENST00000618056 GPATCH4Q5T3I0 446 aaKnown RBP29.19■■■□□ 2.26
PMS1-220ENST00000618056 STOX1Q6ZVD7 989 aa29.19■■■□□ 2.26
PMS1-220ENST00000618056 NCOA7Q8NI08 942 aa29.19■■■□□ 2.26
PMS1-220ENST00000618056 MAML3Q96JK9 1138 aa29.19■■■□□ 2.26
PMS1-220ENST00000618056 FRMPD2Q68DX3 1309 aaPredicted RBP29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms