RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 CASC1Q6TDU7 716 aa21.26■□□□□ 0.99
SEMA3B-211ENST00000612509 FAM160B2Q86V87 743 aa21.26■□□□□ 0.99
SEMA3B-211ENST00000612509 DGKHQ86XP1 1220 aa21.26■□□□□ 0.99
SEMA3B-211ENST00000612509 RIOX2Q8IUF8 465 aa21.26■□□□□ 0.99
SEMA3B-211ENST00000612509 TRIB2Q92519 343 aa21.26■□□□□ 0.99
SEMA3B-211ENST00000612509 TMEM106CQ9BVX2 250 aa21.26■□□□□ 0.99
SEMA3B-211ENST00000612509 MROH8Q9H579 483 aa21.26■□□□□ 0.99
SEMA3B-211ENST00000612509 SLC38A10Q9HBR0 1119 aa21.26■□□□□ 0.99
SEMA3B-211ENST00000612509 ANO2Q9NQ90 1003 aa21.26■□□□□ 0.99
SEMA3B-211ENST00000612509 TAF6LQ9Y6J9 622 aa21.26■□□□□ 0.99
SEMA3B-211ENST00000612509 TNKSO95271 1327 aa21.26■□□□□ 0.99
SEMA3B-211ENST00000612509 ZKSCAN1P17029 563 aaPredicted RBP21.25■□□□□ 0.99
SEMA3B-211ENST00000612509 COPB2P35606 906 aa21.25■□□□□ 0.99
SEMA3B-211ENST00000612509 STAT3P40763 770 aa21.25■□□□□ 0.99
SEMA3B-211ENST00000612509 IKQ13123 557 aaPredicted RBP21.25■□□□□ 0.99
SEMA3B-211ENST00000612509 ZSCAN10Q96SZ4 725 aaPredicted RBP21.25■□□□□ 0.99
SEMA3B-211ENST00000612509 TEX13BQ9BXU2 312 aa21.25■□□□□ 0.99
SEMA3B-211ENST00000612509 ZSWIM5Q9P217 1185 aa21.25■□□□□ 0.99
SEMA3B-211ENST00000612509 PLA2G6O60733 806 aa21.24■□□□□ 0.99
SEMA3B-211ENST00000612509 ZBED4O75132 1171 aa21.24■□□□□ 0.99
SEMA3B-211ENST00000612509 PDHBP11177 359 aa21.24■□□□□ 0.99
SEMA3B-211ENST00000612509 CCL5P13501 91 aa21.24■□□□□ 0.99
SEMA3B-211ENST00000612509 TRDNQ13061 729 aa21.24■□□□□ 0.99
SEMA3B-211ENST00000612509 SNRNP48Q6IEG0 339 aaKnown RBP21.24■□□□□ 0.99
SEMA3B-211ENST00000612509 STOX1Q6ZVD7 989 aa21.24■□□□□ 0.99
SEMA3B-211ENST00000612509 ENAHQ8N8S7 591 aaPredicted RBP21.24■□□□□ 0.99
SEMA3B-211ENST00000612509 CHURC1Q8WUH1 139 aa21.24■□□□□ 0.99
SEMA3B-211ENST00000612509 UBAC1Q9BSL1 405 aa21.24■□□□□ 0.99
SEMA3B-211ENST00000612509 CTDP1Q9Y5B0 961 aaPredicted RBP21.24■□□□□ 0.99
SEMA3B-211ENST00000612509 BRCA2P51587 3418 aa21.24■□□□□ 0.99
SEMA3B-211ENST00000612509 E7EWF7 191 aa21.23■□□□□ 0.99
SEMA3B-211ENST00000612509 ATP2A1O14983 1001 aa21.23■□□□□ 0.99
SEMA3B-211ENST00000612509 HOXC6P09630 235 aa21.23■□□□□ 0.99
SEMA3B-211ENST00000612509 ADORA2AP29274 412 aa21.23■□□□□ 0.99
SEMA3B-211ENST00000612509 OAZ1P54368 228 aa21.23■□□□□ 0.99
SEMA3B-211ENST00000612509 CYB5R4Q7L1T6 521 aa21.23■□□□□ 0.99
SEMA3B-211ENST00000612509 RALYLQ86SE5 291 aaKnown RBP21.23■□□□□ 0.99
SEMA3B-211ENST00000612509 TRMT44Q8IYL2 757 aaKnown RBP21.23■□□□□ 0.99
SEMA3B-211ENST00000612509 ANKS1AQ92625 1134 aa21.23■□□□□ 0.99
SEMA3B-211ENST00000612509 UNC93B1Q9H1C4 597 aa21.23■□□□□ 0.99
SEMA3B-211ENST00000612509 FRMPD2Q68DX3 1309 aaPredicted RBP21.23■□□□□ 0.99
SEMA3B-211ENST00000612509 STRNO43815 780 aa21.22■□□□□ 0.99
SEMA3B-211ENST00000612509 SNHG28P0DPA3 235 aa21.22■□□□□ 0.99
SEMA3B-211ENST00000612509 FDX1P10109 184 aa21.22■□□□□ 0.99
SEMA3B-211ENST00000612509 TRIM32Q13049 653 aa21.22■□□□□ 0.99
SEMA3B-211ENST00000612509 CCL14Q16627 93 aa21.22■□□□□ 0.99
SEMA3B-211ENST00000612509 ABRAQ8N0Z2 381 aa21.22■□□□□ 0.99
SEMA3B-211ENST00000612509 CPXCR1Q8N123 301 aa21.22■□□□□ 0.99
SEMA3B-211ENST00000612509 PNMA1Q8ND90 353 aa21.22■□□□□ 0.99
SEMA3B-211ENST00000612509 NCOA7Q8NI08 942 aa21.22■□□□□ 0.99
SEMA3B-211ENST00000612509 RNF208Q9H0X6 261 aa21.22■□□□□ 0.99
SEMA3B-211ENST00000612509 KAT14Q9H8E8 782 aa21.22■□□□□ 0.99
SEMA3B-211ENST00000612509 RAVER2Q9HCJ3 691 aaKnown RBP21.22■□□□□ 0.99
SEMA3B-211ENST00000612509 ZNF543Q08ER8 600 aa21.21■□□□□ 0.99
SEMA3B-211ENST00000612509 NPLOC4Q8TAT6 608 aa21.21■□□□□ 0.99
SEMA3B-211ENST00000612509 MMP19Q99542 508 aa21.21■□□□□ 0.99
SEMA3B-211ENST00000612509 PRR12Q9ULL5 1215 aa21.21■□□□□ 0.99
SEMA3B-211ENST00000612509 RIPK3Q9Y572 518 aa21.21■□□□□ 0.99
SEMA3B-211ENST00000612509 PLXNA1Q9UIW2 1896 aa21.21■□□□□ 0.99
SEMA3B-211ENST00000612509 ZNFX1Q9P2E3 1918 aaKnown RBP21.21■□□□□ 0.99
SEMA3B-211ENST00000612509 SLC27A2O14975 620 aa21.2■□□□□ 0.98
SEMA3B-211ENST00000612509 FCER1AP12319 257 aa21.2■□□□□ 0.98
SEMA3B-211ENST00000612509 EN2P19622 333 aaPredicted RBP21.2■□□□□ 0.98
SEMA3B-211ENST00000612509 SEC23AQ15436 765 aa21.2■□□□□ 0.98
SEMA3B-211ENST00000612509 IFIT1BQ5T764 474 aaKnown RBP21.2■□□□□ 0.98
SEMA3B-211ENST00000612509 TTBK2Q6IQ55 1244 aa21.2■□□□□ 0.98
SEMA3B-211ENST00000612509 BTNL9Q6UXG8 535 aa21.2■□□□□ 0.98
SEMA3B-211ENST00000612509 GPCPD1Q9NPB8 672 aa21.2■□□□□ 0.98
SEMA3B-211ENST00000612509 FLRT1Q9NZU1 646 aa21.2■□□□□ 0.98
SEMA3B-211ENST00000612509 COBLO75128 1261 aa21.19■□□□□ 0.98
SEMA3B-211ENST00000612509 GJB1P08034 283 aa21.19■□□□□ 0.98
SEMA3B-211ENST00000612509 PRKAR2AP13861 404 aaKnown RBP21.19■□□□□ 0.98
SEMA3B-211ENST00000612509 SLC16A2P36021 539 aa21.19■□□□□ 0.98
SEMA3B-211ENST00000612509 MAP3K21Q5TCX8 1036 aa21.19■□□□□ 0.98
SEMA3B-211ENST00000612509 SYDE2Q5VT97 1194 aa21.19■□□□□ 0.98
SEMA3B-211ENST00000612509 CREB3L3Q68CJ9 461 aa21.19■□□□□ 0.98
SEMA3B-211ENST00000612509 DPP9Q86TI2 863 aa21.19■□□□□ 0.98
SEMA3B-211ENST00000612509 MB21D2Q8IYB1 491 aaPredicted RBP21.19■□□□□ 0.98
SEMA3B-211ENST00000612509 SHISA4Q96DD7 197 aa21.19■□□□□ 0.98
SEMA3B-211ENST00000612509 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.19■□□□□ 0.98
SEMA3B-211ENST00000612509 PAK6Q9NQU5 681 aaPredicted RBP21.19■□□□□ 0.98
SEMA3B-211ENST00000612509 ZNF536O15090 1300 aa21.19■□□□□ 0.98
SEMA3B-211ENST00000612509 SLC4A3P48751 1232 aa21.18■□□□□ 0.98
SEMA3B-211ENST00000612509 MLLT1Q03111 559 aaPredicted RBP21.18■□□□□ 0.98
SEMA3B-211ENST00000612509 KCTD2Q14681 263 aa21.18■□□□□ 0.98
SEMA3B-211ENST00000612509 NECTIN1Q15223 517 aa21.18■□□□□ 0.98
SEMA3B-211ENST00000612509 GPATCH4Q5T3I0 446 aaKnown RBP21.18■□□□□ 0.98
SEMA3B-211ENST00000612509 CCDC174Q6PII3 467 aa21.18■□□□□ 0.98
SEMA3B-211ENST00000612509 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.18■□□□□ 0.98
SEMA3B-211ENST00000612509 RANBP17Q9H2T7 1088 aaKnown RBP21.18■□□□□ 0.98
SEMA3B-211ENST00000612509 GJA8P48165 433 aa21.17■□□□□ 0.98
SEMA3B-211ENST00000612509 ANTXR2P58335 489 aa21.17■□□□□ 0.98
SEMA3B-211ENST00000612509 SNAP25P60880 206 aa21.17■□□□□ 0.98
SEMA3B-211ENST00000612509 SLC5A4Q9NY91 659 aa21.17■□□□□ 0.98
SEMA3B-211ENST00000612509 RPTORQ8N122 1335 aa21.17■□□□□ 0.98
SEMA3B-211ENST00000612509 FRMPD3Q5JV73 1810 aa21.17■□□□□ 0.98
SEMA3B-211ENST00000612509 IFIT3O14879 490 aaKnown RBP21.16■□□□□ 0.98
SEMA3B-211ENST00000612509 PGK2P07205 417 aa21.16■□□□□ 0.98
SEMA3B-211ENST00000612509 GOLGA8HP0CJ92 632 aa21.16■□□□□ 0.98
SEMA3B-211ENST00000612509 CACNB2Q08289 660 aaPredicted RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms