RNA–Protein interactions for RNA: ENST00000611947.1

U3.50-201, humanhuman

BASIC

Gene U3, Length 228 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U3.50-201ENST00000611947 RNF180Q86T96 592 aa10.93□□□□□ -0.66
U3.50-201ENST00000611947 REPS2Q8NFH8 660 aa10.93□□□□□ -0.66
U3.50-201ENST00000611947 CHURC1Q8WUH1 139 aa10.93□□□□□ -0.66
U3.50-201ENST00000611947 KIFC2Q96AC6 838 aa10.93□□□□□ -0.66
U3.50-201ENST00000611947 NUP88Q99567 741 aaPredicted RBP10.93□□□□□ -0.66
U3.50-201ENST00000611947 COL11A1P12107 1806 aaPredicted RBP10.93□□□□□ -0.66
U3.50-201ENST00000611947 FRMPD3Q5JV73 1810 aa10.93□□□□□ -0.66
U3.50-201ENST00000611947 GREB1LQ9C091 1923 aaPredicted RBP10.92□□□□□ -0.66
U3.50-201ENST00000611947 BMP3P12645 472 aa10.92□□□□□ -0.66
U3.50-201ENST00000611947 AKR1A1P14550 325 aa10.92□□□□□ -0.66
U3.50-201ENST00000611947 SLC4A3P48751 1232 aa10.92□□□□□ -0.66
U3.50-201ENST00000611947 RTP1P59025 263 aa10.92□□□□□ -0.66
U3.50-201ENST00000611947 HDAC1Q13547 482 aaPredicted RBP10.92□□□□□ -0.66
U3.50-201ENST00000611947 ANO1Q5XXA6 986 aa10.92□□□□□ -0.66
U3.50-201ENST00000611947 SLFN13Q68D06 897 aa10.92□□□□□ -0.66
U3.50-201ENST00000611947 SLC39A5Q6ZMH5 540 aa10.92□□□□□ -0.66
U3.50-201ENST00000611947 CPXCR1Q8N123 301 aa10.92□□□□□ -0.66
U3.50-201ENST00000611947 ANKRD35Q8N283 1001 aa10.92□□□□□ -0.66
U3.50-201ENST00000611947 CHST13Q8NET6 341 aa10.92□□□□□ -0.66
U3.50-201ENST00000611947 OTUD7AQ8TE49 926 aaPredicted RBP10.92□□□□□ -0.66
U3.50-201ENST00000611947 SEC62Q99442 399 aaKnown RBP10.92□□□□□ -0.66
U3.50-201ENST00000611947 SLC38A10Q9HBR0 1119 aa10.92□□□□□ -0.66
U3.50-201ENST00000611947 XPNPEP3Q9NQH7 507 aa10.92□□□□□ -0.66
U3.50-201ENST00000611947 HELLSQ9NRZ9 838 aa10.92□□□□□ -0.66
U3.50-201ENST00000611947 ISY1Q9ULR0 285 aaKnown RBP10.92□□□□□ -0.66
U3.50-201ENST00000611947 ATP11BQ9Y2G3 1177 aa10.92□□□□□ -0.66
U3.50-201ENST00000611947 MYH4Q9Y623 1939 aa10.92□□□□□ -0.66
U3.50-201ENST00000611947 SYNGAP1Q96PV0 1343 aa10.91□□□□□ -0.66
U3.50-201ENST00000611947 TSPY2A6NKD2 308 aa10.91□□□□□ -0.66
U3.50-201ENST00000611947 ADCYAP1R1P41586 468 aa10.91□□□□□ -0.66
U3.50-201ENST00000611947 SLC1A4P43007 532 aa10.91□□□□□ -0.66
U3.50-201ENST00000611947 STAT2P52630 851 aa10.91□□□□□ -0.66
U3.50-201ENST00000611947 MDM2Q00987 491 aaPredicted RBP10.91□□□□□ -0.66
U3.50-201ENST00000611947 IKQ13123 557 aaPredicted RBP10.91□□□□□ -0.66
U3.50-201ENST00000611947 LRRC41Q15345 812 aa10.91□□□□□ -0.66
U3.50-201ENST00000611947 FAM47AQ5JRC9 791 aa10.91□□□□□ -0.66
U3.50-201ENST00000611947 ZNF467Q7Z7K2 595 aaPredicted RBP10.91□□□□□ -0.66
U3.50-201ENST00000611947 FAM160B2Q86V87 743 aa10.91□□□□□ -0.66
U3.50-201ENST00000611947 LRRC47Q8N1G4 583 aaKnown RBP10.91□□□□□ -0.66
U3.50-201ENST00000611947 CRBNQ96SW2 442 aa10.91□□□□□ -0.66
U3.50-201ENST00000611947 FAM184BQ9ULE4 1060 aa10.91□□□□□ -0.66
U3.50-201ENST00000611947 STX8Q9UNK0 236 aa10.91□□□□□ -0.66
U3.50-201ENST00000611947 LAMA3Q16787 3333 aa10.91□□□□□ -0.66
U3.50-201ENST00000611947 DNAH12Q6ZR08 3092 aa10.91□□□□□ -0.66
U3.50-201ENST00000611947 SMCHD1A6NHR9 2005 aa10.91□□□□□ -0.66
U3.50-201ENST00000611947 PLIN4Q96Q06 1357 aa10.9□□□□□ -0.66
U3.50-201ENST00000611947 PLXNA1Q9UIW2 1896 aa10.9□□□□□ -0.66
U3.50-201ENST00000611947 TMEM232C9JQI7 657 aa10.9□□□□□ -0.66
U3.50-201ENST00000611947 SOX1O00570 391 aaPredicted RBP10.9□□□□□ -0.66
U3.50-201ENST00000611947 PDE1AP54750 535 aa10.9□□□□□ -0.66
U3.50-201ENST00000611947 MCMDC2Q4G0Z9 681 aa10.9□□□□□ -0.66
U3.50-201ENST00000611947 C1orf53Q5VUE5 145 aa10.9□□□□□ -0.66
U3.50-201ENST00000611947 MAMDC4Q6UXC1 1216 aa10.9□□□□□ -0.66
U3.50-201ENST00000611947 STAG1Q8WVM7 1258 aa10.9□□□□□ -0.66
U3.50-201ENST00000611947 LRCH3Q96II8 777 aa10.9□□□□□ -0.66
U3.50-201ENST00000611947 GMCL1Q96IK5 515 aa10.9□□□□□ -0.66
U3.50-201ENST00000611947 TSEN34Q9BSV6 310 aaKnown RBP10.9□□□□□ -0.66
U3.50-201ENST00000611947 RWDD1Q9H446 243 aaPredicted RBP10.9□□□□□ -0.66
U3.50-201ENST00000611947 SPC25Q9HBM1 224 aa10.9□□□□□ -0.66
U3.50-201ENST00000611947 RAVER2Q9HCJ3 691 aaKnown RBP10.9□□□□□ -0.66
U3.50-201ENST00000611947 PHF24Q9UPV7 400 aa10.9□□□□□ -0.66
U3.50-201ENST00000611947 RIPK3Q9Y572 518 aa10.9□□□□□ -0.66
U3.50-201ENST00000611947 SALL3Q9BXA9 1300 aa10.89□□□□□ -0.67
U3.50-201ENST00000611947 DNAJC25-GNG10A0A024R161 153 aa10.89□□□□□ -0.67
U3.50-201ENST00000611947 RANBP6O60518 1105 aaKnown RBP10.89□□□□□ -0.67
U3.50-201ENST00000611947 PLA2G6O60733 806 aa10.89□□□□□ -0.67
U3.50-201ENST00000611947 ZNF865P0CJ78 1059 aaPredicted RBP10.89□□□□□ -0.67
U3.50-201ENST00000611947 MFAP1P55081 439 aaKnown RBP10.89□□□□□ -0.67
U3.50-201ENST00000611947 SNX17Q15036 470 aa10.89□□□□□ -0.67
U3.50-201ENST00000611947 ALX1Q15699 326 aa10.89□□□□□ -0.67
U3.50-201ENST00000611947 TKFCQ3LXA3 575 aa10.89□□□□□ -0.67
U3.50-201ENST00000611947 RCSD1Q6JBY9 416 aa10.89□□□□□ -0.67
U3.50-201ENST00000611947 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.89□□□□□ -0.67
U3.50-201ENST00000611947 DEFB123Q8N688 67 aa10.89□□□□□ -0.67
U3.50-201ENST00000611947 NUP133Q8WUM0 1156 aa10.89□□□□□ -0.67
U3.50-201ENST00000611947 FERMT2Q96AC1 680 aa10.89□□□□□ -0.67
U3.50-201ENST00000611947 ABHD16BQ9H3Z7 469 aa10.89□□□□□ -0.67
U3.50-201ENST00000611947 PRDM5Q9NQX1 630 aaPredicted RBP10.89□□□□□ -0.67
U3.50-201ENST00000611947 ANAPC4Q9UJX5 808 aa10.89□□□□□ -0.67
U3.50-201ENST00000611947 ZHX1Q9UKY1 873 aaPredicted RBP10.89□□□□□ -0.67
U3.50-201ENST00000611947 TACC3Q9Y6A5 838 aa10.89□□□□□ -0.67
U3.50-201ENST00000611947 TRIM6-TRIM34B2RNG4 842 aa10.88□□□□□ -0.67
U3.50-201ENST00000611947 ORC4O43929 436 aa10.88□□□□□ -0.67
U3.50-201ENST00000611947 DUSP11O75319 330 aaKnown RBP10.88□□□□□ -0.67
U3.50-201ENST00000611947 PGK1P00558 417 aa10.88□□□□□ -0.67
U3.50-201ENST00000611947 TAL1P17542 331 aaPredicted RBP10.88□□□□□ -0.67
U3.50-201ENST00000611947 MCCP23508 829 aa10.88□□□□□ -0.67
U3.50-201ENST00000611947 CTDSPL2Q05D32 466 aa10.88□□□□□ -0.67
U3.50-201ENST00000611947 ACVR2BQ13705 512 aa10.88□□□□□ -0.67
U3.50-201ENST00000611947 TRIM60Q495X7 471 aa10.88□□□□□ -0.67
U3.50-201ENST00000611947 CCDC129Q6ZRS4 1044 aa10.88□□□□□ -0.67
U3.50-201ENST00000611947 ACAD9Q9H845 621 aa10.88□□□□□ -0.67
U3.50-201ENST00000611947 TOMM22Q9NS69 142 aa10.88□□□□□ -0.67
U3.50-201ENST00000611947 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.88□□□□□ -0.67
U3.50-201ENST00000611947 MOXD2PA6NHM9 499 aa10.87□□□□□ -0.67
U3.50-201ENST00000611947 POTEB2H3BUK9 544 aa10.87□□□□□ -0.67
U3.50-201ENST00000611947 SNAI1O95863 264 aaPredicted RBP10.87□□□□□ -0.67
U3.50-201ENST00000611947 PCP11498 1178 aaKnown RBP10.87□□□□□ -0.67
U3.50-201ENST00000611947 TLE2Q04725 743 aa10.87□□□□□ -0.67
U3.50-201ENST00000611947 PCSK9Q8NBP7 692 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms