RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 PLIN4Q96Q06 1357 aa15.47■□□□□ 0.07
NEK3-205ENST00000610828 FRMPD2Q68DX3 1309 aaPredicted RBP15.47■□□□□ 0.07
NEK3-205ENST00000610828 H0YIN7 160 aa15.47■□□□□ 0.07
NEK3-205ENST00000610828 MYO1BO43795 1136 aa15.47■□□□□ 0.07
NEK3-205ENST00000610828 PDHBP11177 359 aa15.47■□□□□ 0.07
NEK3-205ENST00000610828 CDC25AP30304 524 aa15.47■□□□□ 0.07
NEK3-205ENST00000610828 LONP1P36776 959 aaKnown RBP15.47■□□□□ 0.07
NEK3-205ENST00000610828 DPYDQ12882 1025 aa15.47■□□□□ 0.07
NEK3-205ENST00000610828 TPD52L1Q16890 204 aaPredicted RBP15.47■□□□□ 0.07
NEK3-205ENST00000610828 APOBEC3HQ6NTF7 200 aaKnown RBP15.47■□□□□ 0.07
NEK3-205ENST00000610828 PODNQ7Z5L7 613 aa15.47■□□□□ 0.07
NEK3-205ENST00000610828 PIGSQ96S52 555 aa15.47■□□□□ 0.07
NEK3-205ENST00000610828 SMCO2A6NFE2 343 aa15.46■□□□□ 0.07
NEK3-205ENST00000610828 CDK11BP21127 795 aaKnown RBP15.46■□□□□ 0.07
NEK3-205ENST00000610828 SFPQP23246 707 aaKnown RBP eCLIP15.46■□□□□ 0.07
NEK3-205ENST00000610828 E2F4Q16254 413 aa15.46■□□□□ 0.07
NEK3-205ENST00000610828 ARMCX5Q6P1M9 558 aa15.46■□□□□ 0.07
NEK3-205ENST00000610828 CCDC150Q8NCX0 1101 aa15.46■□□□□ 0.07
NEK3-205ENST00000610828 ENOX1Q8TC92 643 aaKnown RBP15.46■□□□□ 0.07
NEK3-205ENST00000610828 MYH8P13535 1937 aa15.46■□□□□ 0.07
NEK3-205ENST00000610828 RXRBP28702 533 aa15.46■□□□□ 0.06
NEK3-205ENST00000610828 TXLNAP40222 546 aa15.46■□□□□ 0.06
NEK3-205ENST00000610828 CRKP46108 304 aa15.46■□□□□ 0.06
NEK3-205ENST00000610828 NFIAQ12857 509 aa15.46■□□□□ 0.06
NEK3-205ENST00000610828 SOGA3Q5TF21 947 aa15.46■□□□□ 0.06
NEK3-205ENST00000610828 DTHD1Q6ZMT9 781 aa15.46■□□□□ 0.06
NEK3-205ENST00000610828 KIAA0825Q8IV33 1275 aa15.46■□□□□ 0.06
NEK3-205ENST00000610828 MYRIPQ8NFW9 859 aa15.46■□□□□ 0.06
NEK3-205ENST00000610828 GSDMAQ96QA5 445 aa15.46■□□□□ 0.06
NEK3-205ENST00000610828 PYM1Q9BRP8 204 aaKnown RBP15.46■□□□□ 0.06
NEK3-205ENST00000610828 C6orf50Q9HD87 102 aa15.46■□□□□ 0.06
NEK3-205ENST00000610828 SWAP70Q9UH65 585 aa15.46■□□□□ 0.06
NEK3-205ENST00000610828 HLA-DOAP06340 250 aa15.45■□□□□ 0.06
NEK3-205ENST00000610828 SMARCA1P28370 1054 aa15.45■□□□□ 0.06
NEK3-205ENST00000610828 GNA11P29992 359 aa15.45■□□□□ 0.06
NEK3-205ENST00000610828 KLHL10Q6JEL2 608 aa15.45■□□□□ 0.06
NEK3-205ENST00000610828 FAM177A1Q8N128 213 aaPredicted RBP15.45■□□□□ 0.06
NEK3-205ENST00000610828 BLZF1Q9H2G9 400 aa15.45■□□□□ 0.06
NEK3-205ENST00000610828 TMEM60Q9H2L4 133 aa15.45■□□□□ 0.06
NEK3-205ENST00000610828 PTPN21Q16825 1174 aa15.44■□□□□ 0.06
NEK3-205ENST00000610828 PDXDC2PQ6P474 469 aa15.44■□□□□ 0.06
NEK3-205ENST00000610828 MED15Q96RN5 788 aa15.44■□□□□ 0.06
NEK3-205ENST00000610828 USP27XA6NNY8 438 aa15.44■□□□□ 0.06
NEK3-205ENST00000610828 TMEM232C9JQI7 657 aa15.44■□□□□ 0.06
NEK3-205ENST00000610828 MPHOSPH10O00566 681 aaKnown RBP15.44■□□□□ 0.06
NEK3-205ENST00000610828 TTLL1O95922 423 aa15.44■□□□□ 0.06
NEK3-205ENST00000610828 ERCC5P28715 1186 aaPredicted RBP15.44■□□□□ 0.06
NEK3-205ENST00000610828 SHMT1P34896 483 aa15.44■□□□□ 0.06
NEK3-205ENST00000610828 RBM5P52756 815 aaKnown RBP eCLIP15.44■□□□□ 0.06
NEK3-205ENST00000610828 KARSQ15046 597 aaKnown RBP15.44■□□□□ 0.06
NEK3-205ENST00000610828 KRT25Q7Z3Z0 450 aa15.44■□□□□ 0.06
NEK3-205ENST00000610828 SMYD4Q8IYR2 804 aaPredicted RBP15.44■□□□□ 0.06
NEK3-205ENST00000610828 RASSF8Q8NHQ8 419 aa15.44■□□□□ 0.06
NEK3-205ENST00000610828 RIOX1Q9H6W3 641 aa15.44■□□□□ 0.06
NEK3-205ENST00000610828 IGKV6D-41A0A0C4DH26 115 aa15.43■□□□□ 0.06
NEK3-205ENST00000610828 TNNT1P13805 278 aa15.43■□□□□ 0.06
NEK3-205ENST00000610828 CD44P16070 742 aaKnown RBP15.43■□□□□ 0.06
NEK3-205ENST00000610828 ZNF18P17022 549 aa15.43■□□□□ 0.06
NEK3-205ENST00000610828 CHRNA5P30532 468 aa15.43■□□□□ 0.06
NEK3-205ENST00000610828 CACNB3P54284 484 aa15.43■□□□□ 0.06
NEK3-205ENST00000610828 ATP2B2Q01814 1243 aa15.43■□□□□ 0.06
NEK3-205ENST00000610828 NONOQ15233 471 aaKnown RBP eCLIP15.43■□□□□ 0.06
NEK3-205ENST00000610828 LETM2Q2VYF4 491 aa15.43■□□□□ 0.06
NEK3-205ENST00000610828 ASPRV1Q53RT3 343 aa15.43■□□□□ 0.06
NEK3-205ENST00000610828 SAMSN1Q9NSI8 373 aaKnown RBP15.43■□□□□ 0.06
NEK3-205ENST00000610828 PCDHAC2Q9Y5I4 1007 aa15.43■□□□□ 0.06
NEK3-205ENST00000610828 PP2D1A8MPX8 630 aa15.43■□□□□ 0.06
NEK3-205ENST00000610828 ECE2O60344 883 aa15.43■□□□□ 0.06
NEK3-205ENST00000610828 CCNT1O60563 726 aaKnown RBP15.43■□□□□ 0.06
NEK3-205ENST00000610828 SLURP2P0DP57 97 aa15.43■□□□□ 0.06
NEK3-205ENST00000610828 STAT6P42226 847 aa15.43■□□□□ 0.06
NEK3-205ENST00000610828 CUL4BQ13620 913 aa15.43■□□□□ 0.06
NEK3-205ENST00000610828 DHX8Q14562 1220 aaKnown RBP15.43■□□□□ 0.06
NEK3-205ENST00000610828 STYK1Q6J9G0 422 aa15.43■□□□□ 0.06
NEK3-205ENST00000610828 VSTM4Q8IW00 320 aa15.43■□□□□ 0.06
NEK3-205ENST00000610828 UBE2Q2Q8WVN8 375 aa15.43■□□□□ 0.06
NEK3-205ENST00000610828 ZDHHC15Q96MV8 337 aa15.43■□□□□ 0.06
NEK3-205ENST00000610828 MTRQ99707 1265 aa15.43■□□□□ 0.06
NEK3-205ENST00000610828 GPCPD1Q9NPB8 672 aa15.43■□□□□ 0.06
NEK3-205ENST00000610828 TRMT1Q9NXH9 659 aaKnown RBP15.43■□□□□ 0.06
NEK3-205ENST00000610828 SYNRGQ9UMZ2 1314 aa15.43■□□□□ 0.06
NEK3-205ENST00000610828 DYNC1I1O14576 645 aa15.42■□□□□ 0.06
NEK3-205ENST00000610828 NRDCO43847 1150 aa15.42■□□□□ 0.06
NEK3-205ENST00000610828 STX17P56962 302 aa15.42■□□□□ 0.06
NEK3-205ENST00000610828 TCP10Q12799 353 aa15.42■□□□□ 0.06
NEK3-205ENST00000610828 STRIP1Q5VSL9 837 aa15.42■□□□□ 0.06
NEK3-205ENST00000610828 ZFPM1Q8IX07 1006 aa15.42■□□□□ 0.06
NEK3-205ENST00000610828 DISC1Q9NRI5 854 aa15.42■□□□□ 0.06
NEK3-205ENST00000610828 INTS13Q9NVM9 706 aa15.42■□□□□ 0.06
NEK3-205ENST00000610828 BIN2Q9UBW5 565 aaPredicted RBP15.42■□□□□ 0.06
NEK3-205ENST00000610828 SLX4Q8IY92 1834 aa15.42■□□□□ 0.06
NEK3-205ENST00000610828 MYO3BQ8WXR4 1341 aa15.42■□□□□ 0.06
NEK3-205ENST00000610828 LAD1O00515 517 aa15.42■□□□□ 0.06
NEK3-205ENST00000610828 SNHG28P0DPA3 235 aa15.42■□□□□ 0.06
NEK3-205ENST00000610828 UBA7P41226 1012 aa15.42■□□□□ 0.06
NEK3-205ENST00000610828 CT47A1Q5JQC4 288 aaPredicted RBP15.42■□□□□ 0.06
NEK3-205ENST00000610828 REXO1Q8N1G1 1221 aaKnown RBP15.42■□□□□ 0.06
NEK3-205ENST00000610828 GTPBP6O43824 516 aaPredicted RBP15.41■□□□□ 0.06
NEK3-205ENST00000610828 DACT2Q5SW24 774 aa15.41■□□□□ 0.06
NEK3-205ENST00000610828 JAKMIP3Q5VZ66 844 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms