RNA–Protein interactions for RNA: ENST00000610234.5

LINC01278-207, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 4 BASIC

Gene LINC01278, Length 555 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-207ENST00000610234 SMIM22K7EJ46 135 aa17.16■□□□□ 0.34
LINC01278-207ENST00000610234 HOXD11P31277 338 aaPredicted RBP17.16■□□□□ 0.34
LINC01278-207ENST00000610234 COPB2P35606 906 aa17.16■□□□□ 0.34
LINC01278-207ENST00000610234 SLC9C2Q5TAH2 1124 aa17.16■□□□□ 0.34
LINC01278-207ENST00000610234 PSRC1Q6PGN9 363 aaPredicted RBP17.16■□□□□ 0.34
LINC01278-207ENST00000610234 CCDC174Q6PII3 467 aa17.16■□□□□ 0.34
LINC01278-207ENST00000610234 FAM126BQ8IXS8 530 aa17.16■□□□□ 0.34
LINC01278-207ENST00000610234 LCORLQ8N3X6 602 aa17.16■□□□□ 0.34
LINC01278-207ENST00000610234 HERVK_113Q902F9 699 aa17.16■□□□□ 0.34
LINC01278-207ENST00000610234 UPF3AQ9H1J1 476 aaKnown RBP17.16■□□□□ 0.34
LINC01278-207ENST00000610234 C1orf115Q9H7X2 142 aa17.16■□□□□ 0.34
LINC01278-207ENST00000610234 CTAGE5O15320 804 aa17.15■□□□□ 0.34
LINC01278-207ENST00000610234 BMP1P13497 986 aa17.15■□□□□ 0.34
LINC01278-207ENST00000610234 NKX3-2P78367 333 aa17.15■□□□□ 0.34
LINC01278-207ENST00000610234 CCDC129Q6ZRS4 1044 aa17.15■□□□□ 0.34
LINC01278-207ENST00000610234 TMEM199Q8N511 208 aa17.15■□□□□ 0.34
LINC01278-207ENST00000610234 FRAT1Q92837 279 aaPredicted RBP17.15■□□□□ 0.34
LINC01278-207ENST00000610234 FAM122AQ96E09 287 aa17.15■□□□□ 0.34
LINC01278-207ENST00000610234 CCDC17Q96LX7 622 aa17.15■□□□□ 0.34
LINC01278-207ENST00000610234 GLT1D1Q96MS3 346 aa17.15■□□□□ 0.34
LINC01278-207ENST00000610234 CXXC1Q9P0U4 656 aaPredicted RBP17.15■□□□□ 0.34
LINC01278-207ENST00000610234 GBF1Q92538 1859 aa17.15■□□□□ 0.34
LINC01278-207ENST00000610234 ZNF532Q9HCE3 1301 aa17.15■□□□□ 0.34
LINC01278-207ENST00000610234 ARVCFO00192 962 aa17.14■□□□□ 0.33
LINC01278-207ENST00000610234 CD4P01730 458 aa17.14■□□□□ 0.33
LINC01278-207ENST00000610234 ASGR1P07306 291 aa17.14■□□□□ 0.33
LINC01278-207ENST00000610234 ACRP10323 421 aa17.14■□□□□ 0.33
LINC01278-207ENST00000610234 EEF2P13639 858 aaKnown RBP17.14■□□□□ 0.33
LINC01278-207ENST00000610234 TTF1Q15361 905 aaPredicted RBP17.14■□□□□ 0.33
LINC01278-207ENST00000610234 RAB30Q15771 203 aa17.14■□□□□ 0.33
LINC01278-207ENST00000610234 CCDC85BQ15834 202 aaPredicted RBP17.14■□□□□ 0.33
LINC01278-207ENST00000610234 SAMD1Q6SPF0 538 aaPredicted RBP17.14■□□□□ 0.33
LINC01278-207ENST00000610234 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.14■□□□□ 0.33
LINC01278-207ENST00000610234 ZNF467Q7Z7K2 595 aaPredicted RBP17.14■□□□□ 0.33
LINC01278-207ENST00000610234 FGD4Q96M96 766 aa17.14■□□□□ 0.33
LINC01278-207ENST00000610234 YBX2Q9Y2T7 364 aaKnown RBP17.14■□□□□ 0.33
LINC01278-207ENST00000610234 BAZ2AQ9UIF9 1905 aaKnown RBP17.13■□□□□ 0.33
LINC01278-207ENST00000610234 CDK8P49336 464 aa17.13■□□□□ 0.33
LINC01278-207ENST00000610234 GJA9P57773 515 aa17.13■□□□□ 0.33
LINC01278-207ENST00000610234 AACSQ86V21 672 aa17.13■□□□□ 0.33
LINC01278-207ENST00000610234 PCSK9Q8NBP7 692 aaKnown RBP17.13■□□□□ 0.33
LINC01278-207ENST00000610234 NECAB3Q96P71 396 aaPredicted RBP17.13■□□□□ 0.33
LINC01278-207ENST00000610234 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.13■□□□□ 0.33
LINC01278-207ENST00000610234 IL23AQ9NPF7 189 aa17.13■□□□□ 0.33
LINC01278-207ENST00000610234 RIPK3Q9Y572 518 aa17.13■□□□□ 0.33
LINC01278-207ENST00000610234 GREB1LQ9C091 1923 aaPredicted RBP17.13■□□□□ 0.33
LINC01278-207ENST00000610234 PRRC2BQ5JSZ5 2229 aaKnown RBP17.13■□□□□ 0.33
LINC01278-207ENST00000610234 MCM3APO60318 1980 aa17.12■□□□□ 0.33
LINC01278-207ENST00000610234 A0A0U1RQG5 324 aaPredicted RBP17.12■□□□□ 0.33
LINC01278-207ENST00000610234 PRKAB2O43741 272 aa17.12■□□□□ 0.33
LINC01278-207ENST00000610234 ACVR2BQ13705 512 aa17.12■□□□□ 0.33
LINC01278-207ENST00000610234 FAM83BQ5T0W9 1011 aa17.12■□□□□ 0.33
LINC01278-207ENST00000610234 C12orf60Q5U649 245 aa17.12■□□□□ 0.33
LINC01278-207ENST00000610234 C16orf86Q6ZW13 317 aa17.12■□□□□ 0.33
LINC01278-207ENST00000610234 SLC43A3Q8NBI5 491 aa17.12■□□□□ 0.33
LINC01278-207ENST00000610234 TEX13BQ9BXU2 312 aa17.12■□□□□ 0.33
LINC01278-207ENST00000610234 PPP1R12CQ9BZL4 782 aa17.12■□□□□ 0.33
LINC01278-207ENST00000610234 KATNBL1Q9H079 304 aa17.12■□□□□ 0.33
LINC01278-207ENST00000610234 NKX2-4Q9H2Z4 354 aa17.12■□□□□ 0.33
LINC01278-207ENST00000610234 KANSL2Q9H9L4 492 aa17.12■□□□□ 0.33
LINC01278-207ENST00000610234 ATP8A2Q9NTI2 1148 aa17.12■□□□□ 0.33
LINC01278-207ENST00000610234 MSRAQ9UJ68 235 aa17.12■□□□□ 0.33
LINC01278-207ENST00000610234 ZHX1Q9UKY1 873 aaPredicted RBP17.12■□□□□ 0.33
LINC01278-207ENST00000610234 TCF20Q9UGU0 1960 aaKnown RBP17.11■□□□□ 0.33
LINC01278-207ENST00000610234 MUC6Q6W4X9 2439 aa17.11■□□□□ 0.33
LINC01278-207ENST00000610234 CYP2D7A0A087X1C5 515 aa17.11■□□□□ 0.33
LINC01278-207ENST00000610234 ATP2A1O14983 1001 aa17.11■□□□□ 0.33
LINC01278-207ENST00000610234 C6orf222P0C671 652 aaPredicted RBP17.11■□□□□ 0.33
LINC01278-207ENST00000610234 IGFBP4P22692 258 aa17.11■□□□□ 0.33
LINC01278-207ENST00000610234 CYP2C18P33260 490 aa17.11■□□□□ 0.33
LINC01278-207ENST00000610234 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.11■□□□□ 0.33
LINC01278-207ENST00000610234 VWCEQ96DN2 955 aa17.11■□□□□ 0.33
LINC01278-207ENST00000610234 C1QTNF1Q9BXJ1 281 aa17.11■□□□□ 0.33
LINC01278-207ENST00000610234 ARMT1Q9H993 441 aa17.11■□□□□ 0.33
LINC01278-207ENST00000610234 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.11■□□□□ 0.33
LINC01278-207ENST00000610234 ARIH1Q9Y4X5 557 aaPredicted RBP17.11■□□□□ 0.33
LINC01278-207ENST00000610234 CCDC144BQ3MJ40 725 aa17.1■□□□□ 0.33
LINC01278-207ENST00000610234 ZKSCAN2Q63HK3 967 aa17.1■□□□□ 0.33
LINC01278-207ENST00000610234 SNRNP48Q6IEG0 339 aaKnown RBP17.1■□□□□ 0.33
LINC01278-207ENST00000610234 CEP85Q6P2H3 762 aa17.1■□□□□ 0.33
LINC01278-207ENST00000610234 ABHD16BQ9H3Z7 469 aa17.1■□□□□ 0.33
LINC01278-207ENST00000610234 SLC28A3Q9HAS3 691 aa17.1■□□□□ 0.33
LINC01278-207ENST00000610234 GOPCQ9HD26 462 aa17.1■□□□□ 0.33
LINC01278-207ENST00000610234 EXOC6BQ9Y2D4 811 aa17.1■□□□□ 0.33
LINC01278-207ENST00000610234 ZBED9Q6R2W3 1325 aa17.1■□□□□ 0.33
LINC01278-207ENST00000610234 TFF2Q03403 129 aa17.09■□□□□ 0.33
LINC01278-207ENST00000610234 SLFNL1Q499Z3 407 aa17.09■□□□□ 0.33
LINC01278-207ENST00000610234 GNASQ5JWF2 1037 aa17.09■□□□□ 0.33
LINC01278-207ENST00000610234 ERC1Q8IUD2 1116 aa17.09■□□□□ 0.33
LINC01278-207ENST00000610234 DDX11Q96FC9 970 aa17.09■□□□□ 0.33
LINC01278-207ENST00000610234 SLF1Q9BQI6 1058 aa17.09■□□□□ 0.33
LINC01278-207ENST00000610234 UMODL1Q5DID0 1318 aa17.09■□□□□ 0.33
LINC01278-207ENST00000610234 BRWD1Q9NSI6 2320 aa17.08■□□□□ 0.33
LINC01278-207ENST00000610234 ASTN1O14525 1302 aa17.08■□□□□ 0.32
LINC01278-207ENST00000610234 GRIN2DO15399 1336 aa17.08■□□□□ 0.32
LINC01278-207ENST00000610234 USP17L12C9JPN9 530 aa17.08■□□□□ 0.32
LINC01278-207ENST00000610234 USP17L21D6R901 530 aa17.08■□□□□ 0.32
LINC01278-207ENST00000610234 GOLIM4O00461 696 aa17.08■□□□□ 0.32
LINC01278-207ENST00000610234 TLR3O15455 904 aaKnown RBP17.08■□□□□ 0.32
LINC01278-207ENST00000610234 MBD4O95243 580 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms