RNA–Protein interactions for RNA: ENST00000607045.5

TMEM248-207, Transcript of transmembrane protein 248, humanhuman

TSL 3

Gene TMEM248, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-207ENST00000607045 LRRFIP1Q32MZ4 808 aaKnown RBP26.03■■□□□ 1.76
TMEM248-207ENST00000607045 TRIM60Q495X7 471 aa26.03■■□□□ 1.76
TMEM248-207ENST00000607045 LRRC47Q8N1G4 583 aaKnown RBP26.03■■□□□ 1.76
TMEM248-207ENST00000607045 ZNF287Q9HBT7 754 aa26.03■■□□□ 1.76
TMEM248-207ENST00000607045 RAVER2Q9HCJ3 691 aaKnown RBP26.03■■□□□ 1.76
TMEM248-207ENST00000607045 XPNPEP3Q9NQH7 507 aa26.03■■□□□ 1.76
TMEM248-207ENST00000607045 PRKAG2Q9UGJ0 569 aa26.03■■□□□ 1.76
TMEM248-207ENST00000607045 RARBP10826 455 aa26.02■■□□□ 1.76
TMEM248-207ENST00000607045 TFAP4Q01664 338 aa26.02■■□□□ 1.76
TMEM248-207ENST00000607045 SH3RF1Q7Z6J0 888 aa26.02■■□□□ 1.76
TMEM248-207ENST00000607045 SLC17A8Q8NDX2 589 aa26.02■■□□□ 1.76
TMEM248-207ENST00000607045 NEDD1Q8NHV4 660 aa26.02■■□□□ 1.76
TMEM248-207ENST00000607045 LENG1Q96BZ8 264 aaPredicted RBP26.02■■□□□ 1.76
TMEM248-207ENST00000607045 CHMP4CQ96CF2 233 aa26.02■■□□□ 1.76
TMEM248-207ENST00000607045 DDX11Q96FC9 970 aa26.02■■□□□ 1.76
TMEM248-207ENST00000607045 NACAP1Q9BZK3 213 aa26.02■■□□□ 1.76
TMEM248-207ENST00000607045 SNAI1O95863 264 aaPredicted RBP26.01■■□□□ 1.75
TMEM248-207ENST00000607045 TTLL1O95922 423 aa26.01■■□□□ 1.75
TMEM248-207ENST00000607045 MX1P20591 662 aa26.01■■□□□ 1.75
TMEM248-207ENST00000607045 SNX17Q15036 470 aa26.01■■□□□ 1.75
TMEM248-207ENST00000607045 CCDC129Q6ZRS4 1044 aa26.01■■□□□ 1.75
TMEM248-207ENST00000607045 GREB1LQ9C091 1923 aaPredicted RBP26.01■■□□□ 1.75
TMEM248-207ENST00000607045 NAPBQ9H115 298 aa26.01■■□□□ 1.75
TMEM248-207ENST00000607045 SLC38A10Q9HBR0 1119 aa26.01■■□□□ 1.75
TMEM248-207ENST00000607045 PRDM5Q9NQX1 630 aaPredicted RBP26.01■■□□□ 1.75
TMEM248-207ENST00000607045 MTMR10Q9NXD2 777 aa26.01■■□□□ 1.75
TMEM248-207ENST00000607045 DNAJC25-GNG10A0A024R161 153 aa26■■□□□ 1.75
TMEM248-207ENST00000607045 ATP2A1O14983 1001 aa26■■□□□ 1.75
TMEM248-207ENST00000607045 FOXP2O15409 715 aa26■■□□□ 1.75
TMEM248-207ENST00000607045 TSPY3P0CV98 308 aa26■■□□□ 1.75
TMEM248-207ENST00000607045 TSPY8P0CW00 308 aa26■■□□□ 1.75
TMEM248-207ENST00000607045 TLE2Q04725 743 aa26■■□□□ 1.75
TMEM248-207ENST00000607045 PDE4BQ07343 736 aa26■■□□□ 1.75
TMEM248-207ENST00000607045 PPARAQ07869 468 aa26■■□□□ 1.75
TMEM248-207ENST00000607045 SLFN13Q68D06 897 aa26■■□□□ 1.75
TMEM248-207ENST00000607045 FEM1BQ9UK73 627 aa26■■□□□ 1.75
TMEM248-207ENST00000607045 PHF24Q9UPV7 400 aa26■■□□□ 1.75
TMEM248-207ENST00000607045 TRIM43BA6NCK2 446 aa25.99■■□□□ 1.75
TMEM248-207ENST00000607045 ANKRD45Q5TZF3 282 aa25.99■■□□□ 1.75
TMEM248-207ENST00000607045 GMCL1P1Q8NEA9 526 aa25.99■■□□□ 1.75
TMEM248-207ENST00000607045 BADQ92934 168 aa25.99■■□□□ 1.75
TMEM248-207ENST00000607045 TRIM43Q96BQ3 446 aaPredicted RBP25.99■■□□□ 1.75
TMEM248-207ENST00000607045 CNPY2Q9Y2B0 182 aa25.99■■□□□ 1.75
TMEM248-207ENST00000607045 CTDP1Q9Y5B0 961 aaPredicted RBP25.99■■□□□ 1.75
TMEM248-207ENST00000607045 SALL3Q9BXA9 1300 aa25.98■■□□□ 1.75
TMEM248-207ENST00000607045 BMP3P12645 472 aa25.98■■□□□ 1.75
TMEM248-207ENST00000607045 AKR1A1P14550 325 aa25.98■■□□□ 1.75
TMEM248-207ENST00000607045 RRP1P56182 461 aaKnown RBP25.98■■□□□ 1.75
TMEM248-207ENST00000607045 RNF180Q86T96 592 aa25.98■■□□□ 1.75
TMEM248-207ENST00000607045 PDLIM7Q9NR12 457 aa25.98■■□□□ 1.75
TMEM248-207ENST00000607045 TACC3Q9Y6A5 838 aa25.98■■□□□ 1.75
TMEM248-207ENST00000607045 TMEM232C9JQI7 657 aa25.97■■□□□ 1.75
TMEM248-207ENST00000607045 POTEB2H3BUK9 544 aa25.97■■□□□ 1.75
TMEM248-207ENST00000607045 CTDSPL2Q05D32 466 aa25.97■■□□□ 1.75
TMEM248-207ENST00000607045 SHHQ15465 462 aa25.97■■□□□ 1.75
TMEM248-207ENST00000607045 C1orf53Q5VUE5 145 aa25.97■■□□□ 1.75
TMEM248-207ENST00000607045 MAMDC4Q6UXC1 1216 aa25.97■■□□□ 1.75
TMEM248-207ENST00000607045 CRBNQ96SW2 442 aa25.97■■□□□ 1.75
TMEM248-207ENST00000607045 ADAMTS4O75173 837 aa25.96■■□□□ 1.75
TMEM248-207ENST00000607045 SLC3A2P08195 630 aaKnown RBP25.96■■□□□ 1.75
TMEM248-207ENST00000607045 ITGB8P26012 769 aa25.96■■□□□ 1.75
TMEM248-207ENST00000607045 C9orf50Q5SZB4 431 aa25.96■■□□□ 1.75
TMEM248-207ENST00000607045 VPS53Q5VIR6 699 aa25.96■■□□□ 1.75
TMEM248-207ENST00000607045 ANKRD35Q8N283 1001 aa25.96■■□□□ 1.75
TMEM248-207ENST00000607045 MSL3Q8N5Y2 521 aaKnown RBP25.96■■□□□ 1.75
TMEM248-207ENST00000607045 FGD4Q96M96 766 aa25.96■■□□□ 1.75
TMEM248-207ENST00000607045 SYNPO2Q9UMS6 1093 aa25.96■■□□□ 1.75
TMEM248-207ENST00000607045 NMT2O60551 498 aa25.95■■□□□ 1.74
TMEM248-207ENST00000607045 MCCP23508 829 aa25.95■■□□□ 1.74
TMEM248-207ENST00000607045 IRX5P78411 483 aaPredicted RBP25.95■■□□□ 1.74
TMEM248-207ENST00000607045 IL17RBQ9NRM6 502 aa25.95■■□□□ 1.74
TMEM248-207ENST00000607045 ZHX1Q9UKY1 873 aaPredicted RBP25.95■■□□□ 1.74
TMEM248-207ENST00000607045 FAM184BQ9ULE4 1060 aa25.95■■□□□ 1.74
TMEM248-207ENST00000607045 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.95■■□□□ 1.74
TMEM248-207ENST00000607045 SYNGAP1Q96PV0 1343 aa25.94■■□□□ 1.74
TMEM248-207ENST00000607045 A0A1W2PQ45 241 aaPredicted RBP25.94■■□□□ 1.74
TMEM248-207ENST00000607045 A0A1W2PQY0 241 aa25.94■■□□□ 1.74
TMEM248-207ENST00000607045 HOMER2Q9NSB8 354 aa25.94■■□□□ 1.74
TMEM248-207ENST00000607045 ISY1Q9ULR0 285 aaKnown RBP25.94■■□□□ 1.74
TMEM248-207ENST00000607045 SNAP25P60880 206 aa25.93■■□□□ 1.74
TMEM248-207ENST00000607045 ACVR2BQ13705 512 aa25.93■■□□□ 1.74
TMEM248-207ENST00000607045 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.93■■□□□ 1.74
TMEM248-207ENST00000607045 ZNF467Q7Z7K2 595 aaPredicted RBP25.93■■□□□ 1.74
TMEM248-207ENST00000607045 KLHDC9Q8NEP7 349 aa25.93■■□□□ 1.74
TMEM248-207ENST00000607045 CHST13Q8NET6 341 aa25.93■■□□□ 1.74
TMEM248-207ENST00000607045 AGBL1Q96MI9 1066 aa25.93■■□□□ 1.74
TMEM248-207ENST00000607045 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.93■■□□□ 1.74
TMEM248-207ENST00000607045 STXBP5LQ9Y2K9 1186 aa25.93■■□□□ 1.74
TMEM248-207ENST00000607045 PLIN4Q96Q06 1357 aa25.93■■□□□ 1.74
TMEM248-207ENST00000607045 UNC80Q8N2C7 3258 aa25.92■■□□□ 1.74
TMEM248-207ENST00000607045 MYADML2A6NDP7 307 aa25.92■■□□□ 1.74
TMEM248-207ENST00000607045 ADCY6O43306 1168 aa25.92■■□□□ 1.74
TMEM248-207ENST00000607045 ACLYP53396 1101 aa25.92■■□□□ 1.74
TMEM248-207ENST00000607045 OAZ1P54368 228 aa25.92■■□□□ 1.74
TMEM248-207ENST00000607045 CNTN2Q02246 1040 aa25.92■■□□□ 1.74
TMEM248-207ENST00000607045 KCNA10Q16322 511 aa25.92■■□□□ 1.74
TMEM248-207ENST00000607045 CCSAPQ6IQ19 270 aaPredicted RBP25.92■■□□□ 1.74
TMEM248-207ENST00000607045 KCTD1Q719H9 257 aa25.92■■□□□ 1.74
TMEM248-207ENST00000607045 STAG1Q8WVM7 1258 aa25.92■■□□□ 1.74
TMEM248-207ENST00000607045 FAM161BQ96MY7 647 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms