RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 TREML4Q6UXN2 200 aa7.26□□□□□ -1.25
SRGAP2-211ENST00000604423 RAD9BQ6WBX8 426 aa7.26□□□□□ -1.25
SRGAP2-211ENST00000604423 MICALCLQ6ZW33 695 aa7.26□□□□□ -1.25
SRGAP2-211ENST00000604423 B4GALNT4Q76KP1 1039 aa7.26□□□□□ -1.25
SRGAP2-211ENST00000604423 METTL16Q86W50 562 aaKnown RBP7.26□□□□□ -1.25
SRGAP2-211ENST00000604423 SPATS2Q86XZ4 545 aaKnown RBP7.26□□□□□ -1.25
SRGAP2-211ENST00000604423 NOA1Q8NC60 698 aaKnown RBP7.26□□□□□ -1.25
SRGAP2-211ENST00000604423 ENOX1Q8TC92 643 aaKnown RBP7.26□□□□□ -1.25
SRGAP2-211ENST00000604423 COG1Q8WTW3 980 aa7.26□□□□□ -1.25
SRGAP2-211ENST00000604423 CPLX3Q8WVH0 158 aa7.26□□□□□ -1.25
SRGAP2-211ENST00000604423 CCDC51Q96ER9 411 aa7.26□□□□□ -1.25
SRGAP2-211ENST00000604423 RPGRIP1Q96KN7 1286 aa7.26□□□□□ -1.25
SRGAP2-211ENST00000604423 CTAGE1Q96RT6 745 aa7.26□□□□□ -1.25
SRGAP2-211ENST00000604423 CDC5LQ99459 802 aaKnown RBP7.26□□□□□ -1.25
SRGAP2-211ENST00000604423 KAT14Q9H8E8 782 aa7.26□□□□□ -1.25
SRGAP2-211ENST00000604423 KCNH3Q9ULD8 1083 aa7.26□□□□□ -1.25
SRGAP2-211ENST00000604423 PCDHA5Q9Y5H7 936 aa7.26□□□□□ -1.25
SRGAP2-211ENST00000604423 ATXN2Q99700 1313 aaKnown RBP7.26□□□□□ -1.25
SRGAP2-211ENST00000604423 METP08581 1390 aa7.26□□□□□ -1.25
SRGAP2-211ENST00000604423 KLF18A0A0U1RQI7 1052 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 BTBD11A6QL63 1104 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 KIF28PB7ZC32 967 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 TERTO14746 1132 aaKnown RBP7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 RAPGEF3O95398 923 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 ZNF18P17022 549 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 GNGT1P63211 74 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 SATB1Q01826 763 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 PLEKHO1Q53GL0 409 aaPredicted RBP7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 TNNI3KQ59H18 835 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 NCAPH2Q6IBW4 605 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 SHC4Q6S5L8 630 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 EP400NLQ6ZTU2 488 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 Q6ZVU0 165 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 OTUD6BQ8N6M0 293 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 TRIML1Q8N9V2 468 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 PRPF38AQ8NAV1 312 aaKnown RBP7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 LINS1Q8NG48 757 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 CLIC6Q96NY7 704 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 JPH2Q9BR39 696 aaPredicted RBP7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 HELLSQ9NRZ9 838 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 GNL3LQ9NVN8 582 aaKnown RBP7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 MAN1B1Q9UKM7 699 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 FPGT-TNNI3KV9GXZ4 949 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 PALLDQ8WX93 1383 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 C4AP0C0L4 1744 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 C4BP0C0L5 1744 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 A0A1B0GTH6 734 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 TARSL2A2RTX5 802 aaKnown RBP7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 A6NNZ2 444 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 GOLGA8KD6RF30 607 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 EIF3HO15372 352 aaKnown RBP eCLIP7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 CDKL5O76039 1030 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 ARHGAP25P42331 645 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 PLCD1P51178 756 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 IRAK1P51617 712 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 USP14P54578 494 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 PDE4BQ07343 736 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 RBL2Q08999 1139 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 NEXNQ0ZGT2 675 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 NR1I3Q14994 352 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 TUBB8Q3ZCM7 444 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 LONRF3Q496Y0 759 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 KCNV1Q6PIU1 500 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 CPLX2Q6PUV4 134 aaKnown RBP7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 RALYLQ86SE5 291 aaKnown RBP7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 VPS37DQ86XT2 251 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 TMTC1Q8IUR5 882 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 HOMEZQ8IX15 550 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 KBTBD3Q8NAB2 608 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 ACRBPQ8NEB7 543 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 STAG1Q8WVM7 1258 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 LTV1Q96GA3 475 aaPredicted RBP7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 HAUS7Q99871 368 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 TEX13AQ9BXU3 409 aaPredicted RBP7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 NXF1Q9UBU9 619 aaKnown RBP7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 DBNLQ9UJU6 430 aaKnown RBP7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 DNMT3LQ9UJW3 386 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 WWC3Q9ULE0 1092 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 SYNRGQ9UMZ2 1314 aa7.25□□□□□ -1.25
SRGAP2-211ENST00000604423 ECM29Q5VYK3 1845 aa7.24□□□□□ -1.25
SRGAP2-211ENST00000604423 ANKARQ7Z5J8 1434 aa7.24□□□□□ -1.25
SRGAP2-211ENST00000604423 NDUFAB1O14561 156 aa7.24□□□□□ -1.25
SRGAP2-211ENST00000604423 OPA1O60313 960 aa7.24□□□□□ -1.25
SRGAP2-211ENST00000604423 CDC27P30260 824 aa7.24□□□□□ -1.25
SRGAP2-211ENST00000604423 CDR1P51861 262 aa7.24□□□□□ -1.25
SRGAP2-211ENST00000604423 FMR1Q06787 632 aaKnown RBP eCLIP7.24□□□□□ -1.25
SRGAP2-211ENST00000604423 VAC14Q08AM6 782 aa7.24□□□□□ -1.25
SRGAP2-211ENST00000604423 CYP26C1Q6V0L0 522 aa7.24□□□□□ -1.25
SRGAP2-211ENST00000604423 KLHDC4Q8TBB5 520 aa7.24□□□□□ -1.25
SRGAP2-211ENST00000604423 RIN2Q8WYP3 895 aaPredicted RBP7.24□□□□□ -1.25
SRGAP2-211ENST00000604423 ALG1Q9BT22 464 aa7.24□□□□□ -1.25
SRGAP2-211ENST00000604423 SELENOOQ9BVL4 669 aa7.24□□□□□ -1.25
SRGAP2-211ENST00000604423 A1CFQ9NQ94 594 aaKnown RBP7.24□□□□□ -1.25
SRGAP2-211ENST00000604423 ZNF330Q9Y3S2 320 aaPredicted RBP7.24□□□□□ -1.25
SRGAP2-211ENST00000604423 CCDC9Q9Y3X0 531 aaKnown RBP7.24□□□□□ -1.25
SRGAP2-211ENST00000604423 MAP3K15Q6ZN16 1313 aa7.24□□□□□ -1.25
SRGAP2-211ENST00000604423 KDM6AO15550 1401 aaPredicted RBP7.24□□□□□ -1.25
SRGAP2-211ENST00000604423 PTPRUQ92729 1446 aa7.24□□□□□ -1.25
SRGAP2-211ENST00000604423 PIK3C2AO00443 1686 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms