RNA–Protein interactions for RNA: ENST00000604254.5

FOCAD-213, Transcript of focadhesin, humanhuman

TSL 5

Gene FOCAD, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-213ENST00000604254 A0A1W2PPC1 479 aa6.94□□□□□ -1.3
FOCAD-213ENST00000604254 TSPY2A6NKD2 308 aa6.94□□□□□ -1.3
FOCAD-213ENST00000604254 H0YGN5 161 aa6.94□□□□□ -1.3
FOCAD-213ENST00000604254 FOXP2O15409 715 aa6.94□□□□□ -1.3
FOCAD-213ENST00000604254 TTLL1O95922 423 aa6.94□□□□□ -1.3
FOCAD-213ENST00000604254 HMGCRP04035 888 aa6.94□□□□□ -1.3
FOCAD-213ENST00000604254 INHAP05111 366 aa6.94□□□□□ -1.3
FOCAD-213ENST00000604254 HSPD1P10809 573 aaKnown RBP6.94□□□□□ -1.3
FOCAD-213ENST00000604254 CCL5P13501 91 aa6.94□□□□□ -1.3
FOCAD-213ENST00000604254 RGS2P41220 211 aa6.94□□□□□ -1.3
FOCAD-213ENST00000604254 CTDSPL2Q05D32 466 aa6.94□□□□□ -1.3
FOCAD-213ENST00000604254 PLS1Q14651 629 aa6.94□□□□□ -1.3
FOCAD-213ENST00000604254 COG2Q14746 738 aa6.94□□□□□ -1.3
FOCAD-213ENST00000604254 MTFR1Q15390 333 aa6.94□□□□□ -1.3
FOCAD-213ENST00000604254 FAM47AQ5JRC9 791 aa6.94□□□□□ -1.3
FOCAD-213ENST00000604254 KIAA1755Q5JYT7 1200 aa6.94□□□□□ -1.3
FOCAD-213ENST00000604254 PPP4R3BQ5MIZ7 849 aa6.94□□□□□ -1.3
FOCAD-213ENST00000604254 FAM83BQ5T0W9 1011 aa6.94□□□□□ -1.3
FOCAD-213ENST00000604254 TTC22Q5TAA0 569 aa6.94□□□□□ -1.3
FOCAD-213ENST00000604254 CWC27Q6UX04 472 aaKnown RBP6.94□□□□□ -1.3
FOCAD-213ENST00000604254 PLEKHH3Q7Z736 793 aa6.94□□□□□ -1.3
FOCAD-213ENST00000604254 SIAH1Q8IUQ4 282 aa6.94□□□□□ -1.3
FOCAD-213ENST00000604254 LRRC47Q8N1G4 583 aaKnown RBP6.94□□□□□ -1.3
FOCAD-213ENST00000604254 ZNF710Q8N1W2 664 aa6.94□□□□□ -1.3
FOCAD-213ENST00000604254 MB21D1Q8N884 522 aa6.94□□□□□ -1.3
FOCAD-213ENST00000604254 PXYLP1Q8TE99 480 aa6.94□□□□□ -1.3
FOCAD-213ENST00000604254 NUDT12Q9BQG2 462 aa6.94□□□□□ -1.3
FOCAD-213ENST00000604254 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.94□□□□□ -1.3
FOCAD-213ENST00000604254 RNF208Q9H0X6 261 aa6.94□□□□□ -1.3
FOCAD-213ENST00000604254 PORCNQ9H237 461 aa6.94□□□□□ -1.3
FOCAD-213ENST00000604254 TOMM22Q9NS69 142 aa6.94□□□□□ -1.3
FOCAD-213ENST00000604254 HOXC10Q9NYD6 342 aa6.94□□□□□ -1.3
FOCAD-213ENST00000604254 BTBD7Q9P203 1132 aa6.94□□□□□ -1.3
FOCAD-213ENST00000604254 NYAP2Q9P242 653 aa6.94□□□□□ -1.3
FOCAD-213ENST00000604254 CLIP2Q9UDT6 1046 aa6.94□□□□□ -1.3
FOCAD-213ENST00000604254 ISY1Q9ULR0 285 aaKnown RBP6.94□□□□□ -1.3
FOCAD-213ENST00000604254 IVNS1ABPQ9Y6Y0 642 aa6.94□□□□□ -1.3
FOCAD-213ENST00000604254 IGKV6D-41A0A0C4DH26 115 aa6.93□□□□□ -1.3
FOCAD-213ENST00000604254 RANBP6O60518 1105 aaKnown RBP6.93□□□□□ -1.3
FOCAD-213ENST00000604254 CNMDO75829 334 aa6.93□□□□□ -1.3
FOCAD-213ENST00000604254 NDUFB10O96000 172 aa6.93□□□□□ -1.3
FOCAD-213ENST00000604254 FGAP02671 866 aa6.93□□□□□ -1.3
FOCAD-213ENST00000604254 GSPT1P15170 499 aaKnown RBP6.93□□□□□ -1.3
FOCAD-213ENST00000604254 ZKSCAN1P17029 563 aaPredicted RBP6.93□□□□□ -1.3
FOCAD-213ENST00000604254 CYP2B6P20813 491 aa6.93□□□□□ -1.3
FOCAD-213ENST00000604254 HAND2P61296 217 aa6.93□□□□□ -1.3
FOCAD-213ENST00000604254 TFAP4Q01664 338 aa6.93□□□□□ -1.3
FOCAD-213ENST00000604254 ALX1Q15699 326 aa6.93□□□□□ -1.3
FOCAD-213ENST00000604254 Q3C1V9 767 aa6.93□□□□□ -1.3
FOCAD-213ENST00000604254 RRP12Q5JTH9 1297 aaKnown RBP6.93□□□□□ -1.3
FOCAD-213ENST00000604254 TRMT44Q8IYL2 757 aaKnown RBP6.93□□□□□ -1.3
FOCAD-213ENST00000604254 NEDD1Q8NHV4 660 aa6.93□□□□□ -1.3
FOCAD-213ENST00000604254 NKX2-3Q8TAU0 364 aa6.93□□□□□ -1.3
FOCAD-213ENST00000604254 DDX12PQ92771 950 aa6.93□□□□□ -1.3
FOCAD-213ENST00000604254 ATG4CQ96DT6 458 aa6.93□□□□□ -1.3
FOCAD-213ENST00000604254 NUP88Q99567 741 aaPredicted RBP6.93□□□□□ -1.3
FOCAD-213ENST00000604254 APBA2Q99767 749 aa6.93□□□□□ -1.3
FOCAD-213ENST00000604254 SPATC1LQ9H0A9 340 aa6.93□□□□□ -1.3
FOCAD-213ENST00000604254 UNC93B1Q9H1C4 597 aa6.93□□□□□ -1.3
FOCAD-213ENST00000604254 MTMR4Q9NYA4 1195 aa6.93□□□□□ -1.3
FOCAD-213ENST00000604254 RBM27Q9P2N5 1060 aaKnown RBP6.93□□□□□ -1.3
FOCAD-213ENST00000604254 ANAPC4Q9UJX5 808 aa6.93□□□□□ -1.3
FOCAD-213ENST00000604254 SYNPO2Q9UMS6 1093 aa6.93□□□□□ -1.3
FOCAD-213ENST00000604254 STX8Q9UNK0 236 aa6.93□□□□□ -1.3
FOCAD-213ENST00000604254 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.93□□□□□ -1.3
FOCAD-213ENST00000604254 CTDP1Q9Y5B0 961 aaPredicted RBP6.93□□□□□ -1.3
FOCAD-213ENST00000604254 F5H6K3 240 aa6.92□□□□□ -1.3
FOCAD-213ENST00000604254 ORC4O43929 436 aa6.92□□□□□ -1.3
FOCAD-213ENST00000604254 GJB1P08034 283 aa6.92□□□□□ -1.3
FOCAD-213ENST00000604254 ERCC3P19447 782 aa6.92□□□□□ -1.3
FOCAD-213ENST00000604254 KLRC3Q07444 240 aa6.92□□□□□ -1.3
FOCAD-213ENST00000604254 IKQ13123 557 aaPredicted RBP6.92□□□□□ -1.3
FOCAD-213ENST00000604254 MAP2K5Q13163 448 aa6.92□□□□□ -1.3
FOCAD-213ENST00000604254 MORN1Q5T089 497 aa6.92□□□□□ -1.3
FOCAD-213ENST00000604254 POTEEQ6S8J3 1075 aa6.92□□□□□ -1.3
FOCAD-213ENST00000604254 NCAPG2Q86XI2 1143 aa6.92□□□□□ -1.3
FOCAD-213ENST00000604254 GMCL1P1Q8NEA9 526 aa6.92□□□□□ -1.3
FOCAD-213ENST00000604254 SHCBP1Q8NEM2 672 aa6.92□□□□□ -1.3
FOCAD-213ENST00000604254 TRIB2Q92519 343 aa6.92□□□□□ -1.3
FOCAD-213ENST00000604254 SLF1Q9BQI6 1058 aa6.92□□□□□ -1.3
FOCAD-213ENST00000604254 MOV10L1Q9BXT6 1211 aaKnown RBP6.92□□□□□ -1.3
FOCAD-213ENST00000604254 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.92□□□□□ -1.3
FOCAD-213ENST00000604254 RNF41Q9H4P4 317 aaPredicted RBP6.92□□□□□ -1.3
FOCAD-213ENST00000604254 FBXO28Q9NVF7 368 aa6.92□□□□□ -1.3
FOCAD-213ENST00000604254 GJD2Q9UKL4 321 aa6.92□□□□□ -1.3
FOCAD-213ENST00000604254 PPP1R9AQ9ULJ8 1098 aa6.92□□□□□ -1.3
FOCAD-213ENST00000604254 RAD50Q92878 1312 aa6.92□□□□□ -1.3
FOCAD-213ENST00000604254 RANBP2P49792 3224 aaKnown RBP6.92□□□□□ -1.3
FOCAD-213ENST00000604254 MYH6P13533 1939 aa6.91□□□□□ -1.3
FOCAD-213ENST00000604254 GRXCR2A6NFK2 248 aa6.91□□□□□ -1.3
FOCAD-213ENST00000604254 SLC15A5A6NIM6 579 aa6.91□□□□□ -1.3
FOCAD-213ENST00000604254 VWA5AO00534 786 aa6.91□□□□□ -1.3
FOCAD-213ENST00000604254 ZNF213O14771 459 aa6.91□□□□□ -1.3
FOCAD-213ENST00000604254 NMT2O60551 498 aa6.91□□□□□ -1.3
FOCAD-213ENST00000604254 SLC25A27O95847 323 aa6.91□□□□□ -1.3
FOCAD-213ENST00000604254 PCP11498 1178 aaKnown RBP6.91□□□□□ -1.3
FOCAD-213ENST00000604254 BMP3P12645 472 aa6.91□□□□□ -1.3
FOCAD-213ENST00000604254 XRCC5P13010 732 aaKnown RBP6.91□□□□□ -1.3
FOCAD-213ENST00000604254 CAPN2P17655 700 aa6.91□□□□□ -1.3
FOCAD-213ENST00000604254 PTPREP23469 700 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms