RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 SNIP1Q8TAD8 396 aaKnown RBP5.32□□□□□ -1.56
LINC01109-201ENST00000603837 GSDMBQ8TAX9 411 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 WDR66Q8TBY9 1149 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 TIFAQ96CG3 184 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 APBA2Q99767 749 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 IRX2Q9BZI1 471 aaPredicted RBP5.32□□□□□ -1.56
LINC01109-201ENST00000603837 RABEP2Q9H5N1 569 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 ACAD8Q9UKU7 415 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 SNX5Q9Y5X3 404 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 TLL2Q9Y6L7 1015 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 MYO3AQ8NEV4 1616 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 SOWAHDA6NJG2 315 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 CHUKO15111 745 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 ALDH1A1P00352 501 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 GYS1P13807 737 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 ATF3P18847 181 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 UBASH3AP57075 661 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 WASHC4Q2M389 1173 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 PARP10Q53GL7 1025 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 C6orf118Q5T5N4 469 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 KIAA1328Q86T90 577 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 TRIM42Q8IWZ5 723 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 SLC10A4Q96EP9 437 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 BICD1Q96G01 975 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 ZNF496Q96IT1 587 aaPredicted RBP5.32□□□□□ -1.56
LINC01109-201ENST00000603837 CABS1Q96KC9 395 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 DHRS1Q96LJ7 313 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 UROC1Q96N76 676 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 AGAP3Q96P47 875 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 C1QTNF2Q9BXJ5 285 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 OSBPL5Q9H0X9 879 aaPredicted RBP5.32□□□□□ -1.56
LINC01109-201ENST00000603837 NOB1Q9ULX3 412 aaKnown RBP5.32□□□□□ -1.56
LINC01109-201ENST00000603837 ELP1O95163 1332 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 LTBP4Q8N2S1 1624 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 FRMD3A2A2Y4 597 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 ZSCAN9O15535 394 aaPredicted RBP5.32□□□□□ -1.56
LINC01109-201ENST00000603837 TRIM37O94972 964 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 RANBP1P43487 201 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 DDR1Q08345 913 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 VAC14Q08AM6 782 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 PDIA5Q14554 519 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 WDR43Q15061 677 aaKnown RBP eCLIP5.32□□□□□ -1.56
LINC01109-201ENST00000603837 NEK10Q6ZWH5 1172 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 TMEM87AQ8NBN3 555 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 PANK1Q8TE04 598 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 CHAMP1Q96JM3 812 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 TOR4AQ9NXH8 423 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 KCTD5Q9NXV2 234 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 CFAP45Q9UL16 551 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 ZMIZ1Q9ULJ6 1067 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 PCDHGB3Q9Y5G1 929 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 A0A0B4J203 849 aa5.31□□□□□ -1.56
LINC01109-201ENST00000603837 TMEM110-MUSTN1A8MSY1 372 aa5.31□□□□□ -1.56
LINC01109-201ENST00000603837 AP5Z1O43299 807 aa5.31□□□□□ -1.56
LINC01109-201ENST00000603837 SKAP2O75563 359 aaPredicted RBP5.31□□□□□ -1.56
LINC01109-201ENST00000603837 KRT38O76015 456 aa5.31□□□□□ -1.56
LINC01109-201ENST00000603837 TBC1D8O95759 1140 aa5.31□□□□□ -1.56
LINC01109-201ENST00000603837 PPM1FP49593 454 aaPredicted RBP5.31□□□□□ -1.56
LINC01109-201ENST00000603837 ZNF211Q13398 564 aaPredicted RBP5.31□□□□□ -1.56
LINC01109-201ENST00000603837 MTMR3Q13615 1198 aa5.31□□□□□ -1.56
LINC01109-201ENST00000603837 NAA25Q14CX7 972 aa5.31□□□□□ -1.56
LINC01109-201ENST00000603837 HSP90B2PQ58FF3 399 aa5.31□□□□□ -1.56
LINC01109-201ENST00000603837 TTC39AQ5SRH9 613 aa5.31□□□□□ -1.56
LINC01109-201ENST00000603837 CCDC183Q5T5S1 534 aa5.31□□□□□ -1.56
LINC01109-201ENST00000603837 KIAA1614Q5VZ46 1190 aa5.31□□□□□ -1.56
LINC01109-201ENST00000603837 FIP1L1Q6UN15 594 aaKnown RBP5.31□□□□□ -1.56
LINC01109-201ENST00000603837 RTL10Q7L3V2 364 aa5.31□□□□□ -1.56
LINC01109-201ENST00000603837 SPATA21Q7Z572 469 aa5.31□□□□□ -1.56
LINC01109-201ENST00000603837 TRMT44Q8IYL2 757 aaKnown RBP5.31□□□□□ -1.56
LINC01109-201ENST00000603837 ANKRD42Q8N9B4 389 aa5.31□□□□□ -1.56
LINC01109-201ENST00000603837 ZKSCAN4Q969J2 545 aaPredicted RBP5.31□□□□□ -1.56
LINC01109-201ENST00000603837 SAAL1Q96ER3 474 aa5.31□□□□□ -1.56
LINC01109-201ENST00000603837 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.31□□□□□ -1.56
LINC01109-201ENST00000603837 RPAP3Q9H6T3 665 aaPredicted RBP5.31□□□□□ -1.56
LINC01109-201ENST00000603837 FANCFQ9NPI8 374 aa5.31□□□□□ -1.56
LINC01109-201ENST00000603837 CEP72Q9P209 647 aa5.31□□□□□ -1.56
LINC01109-201ENST00000603837 VPS18Q9P253 973 aa5.31□□□□□ -1.56
LINC01109-201ENST00000603837 SPG7Q9UQ90 795 aa5.31□□□□□ -1.56
LINC01109-201ENST00000603837 CNPY2Q9Y2B0 182 aa5.31□□□□□ -1.56
LINC01109-201ENST00000603837 MRFAP1Q9Y605 127 aa5.31□□□□□ -1.56
LINC01109-201ENST00000603837 SYNDIG1LA6NDD5 238 aa5.31□□□□□ -1.56
LINC01109-201ENST00000603837 SASH3O75995 380 aa5.31□□□□□ -1.56
LINC01109-201ENST00000603837 GNAT2P19087 354 aa5.31□□□□□ -1.56
LINC01109-201ENST00000603837 UBA7P41226 1012 aa5.31□□□□□ -1.56
LINC01109-201ENST00000603837 STT3AP46977 705 aa5.31□□□□□ -1.56
LINC01109-201ENST00000603837 DBN1Q16643 649 aa5.31□□□□□ -1.56
LINC01109-201ENST00000603837 GJC2Q5T442 439 aaPredicted RBP5.31□□□□□ -1.56
LINC01109-201ENST00000603837 ZSCAN25Q6NSZ9 544 aa5.31□□□□□ -1.56
LINC01109-201ENST00000603837 BTN2A1Q7KYR7 527 aa5.31□□□□□ -1.56
LINC01109-201ENST00000603837 FRS2Q8WU20 508 aa5.31□□□□□ -1.56
LINC01109-201ENST00000603837 EZH1Q92800 747 aaPredicted RBP5.31□□□□□ -1.56
LINC01109-201ENST00000603837 TMX3Q96JJ7 454 aa5.31□□□□□ -1.56
LINC01109-201ENST00000603837 RNPC3Q96LT9 517 aaKnown RBP5.31□□□□□ -1.56
LINC01109-201ENST00000603837 SMAD5Q99717 465 aaKnown RBP5.31□□□□□ -1.56
LINC01109-201ENST00000603837 ORC3Q9UBD5 711 aaPredicted RBP5.31□□□□□ -1.56
LINC01109-201ENST00000603837 YEATS2Q9ULM3 1422 aa5.31□□□□□ -1.56
LINC01109-201ENST00000603837 ERC2O15083 957 aa5.3□□□□□ -1.56
LINC01109-201ENST00000603837 VCAM1P19320 739 aa5.3□□□□□ -1.56
LINC01109-201ENST00000603837 FAM83BQ5T0W9 1011 aa5.3□□□□□ -1.56
LINC01109-201ENST00000603837 C10orf76Q5T2E6 689 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 287 ms