RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 ADCYAP1R1P41586 468 aa25.23■■□□□ 1.63
PPFIA3-209ENST00000602783 PDE4BQ07343 736 aa25.23■■□□□ 1.63
PPFIA3-209ENST00000602783 CPXCR1Q8N123 301 aa25.23■■□□□ 1.63
PPFIA3-209ENST00000602783 LBHD1Q9BQE6 289 aaPredicted RBP25.23■■□□□ 1.63
PPFIA3-209ENST00000602783 PRKAG2Q9UGJ0 569 aa25.23■■□□□ 1.63
PPFIA3-209ENST00000602783 RIPK3Q9Y572 518 aa25.23■■□□□ 1.63
PPFIA3-209ENST00000602783 TTLL1O95922 423 aa25.22■■□□□ 1.63
PPFIA3-209ENST00000602783 SLC3A2P08195 630 aaKnown RBP25.22■■□□□ 1.63
PPFIA3-209ENST00000602783 TSPY3P0CV98 308 aa25.22■■□□□ 1.63
PPFIA3-209ENST00000602783 TSPY8P0CW00 308 aa25.22■■□□□ 1.63
PPFIA3-209ENST00000602783 TAL1P17542 331 aaPredicted RBP25.22■■□□□ 1.63
PPFIA3-209ENST00000602783 NEDD1Q8NHV4 660 aa25.22■■□□□ 1.63
PPFIA3-209ENST00000602783 FERMT2Q96AC1 680 aa25.22■■□□□ 1.63
PPFIA3-209ENST00000602783 KIFC2Q96AC6 838 aa25.22■■□□□ 1.63
PPFIA3-209ENST00000602783 DDX11Q96FC9 970 aa25.22■■□□□ 1.63
PPFIA3-209ENST00000602783 RARBP10826 455 aa25.21■■□□□ 1.63
PPFIA3-209ENST00000602783 PDE1AP54750 535 aa25.21■■□□□ 1.63
PPFIA3-209ENST00000602783 TFAP4Q01664 338 aa25.21■■□□□ 1.63
PPFIA3-209ENST00000602783 PPARAQ07869 468 aa25.21■■□□□ 1.63
PPFIA3-209ENST00000602783 GPR153Q6NV75 609 aa25.21■■□□□ 1.63
PPFIA3-209ENST00000602783 LRRC47Q8N1G4 583 aaKnown RBP25.21■■□□□ 1.63
PPFIA3-209ENST00000602783 XPNPEP3Q9NQH7 507 aa25.21■■□□□ 1.63
PPFIA3-209ENST00000602783 FEM1BQ9UK73 627 aa25.21■■□□□ 1.63
PPFIA3-209ENST00000602783 RAVER2Q9HCJ3 691 aaKnown RBP25.2■■□□□ 1.62
PPFIA3-209ENST00000602783 SYNPO2Q9UMS6 1093 aa25.2■■□□□ 1.62
PPFIA3-209ENST00000602783 ATP2A1O14983 1001 aa25.19■■□□□ 1.62
PPFIA3-209ENST00000602783 ZNF865P0CJ78 1059 aaPredicted RBP25.19■■□□□ 1.62
PPFIA3-209ENST00000602783 SLFN13Q68D06 897 aa25.19■■□□□ 1.62
PPFIA3-209ENST00000602783 CCDC129Q6ZRS4 1044 aa25.19■■□□□ 1.62
PPFIA3-209ENST00000602783 DEFB123Q8N688 67 aa25.19■■□□□ 1.62
PPFIA3-209ENST00000602783 GMCL1P1Q8NEA9 526 aa25.19■■□□□ 1.62
PPFIA3-209ENST00000602783 EXOC6Q8TAG9 804 aa25.19■■□□□ 1.62
PPFIA3-209ENST00000602783 LNPKQ9C0E8 428 aa25.19■■□□□ 1.62
PPFIA3-209ENST00000602783 CNPY2Q9Y2B0 182 aa25.19■■□□□ 1.62
PPFIA3-209ENST00000602783 PLXNA1Q9UIW2 1896 aa25.19■■□□□ 1.62
PPFIA3-209ENST00000602783 PGK1P00558 417 aa25.18■■□□□ 1.62
PPFIA3-209ENST00000602783 TRIM60Q495X7 471 aa25.18■■□□□ 1.62
PPFIA3-209ENST00000602783 EVI5LQ96CN4 794 aa25.18■■□□□ 1.62
PPFIA3-209ENST00000602783 SLC38A10Q9HBR0 1119 aa25.18■■□□□ 1.62
PPFIA3-209ENST00000602783 BMP3P12645 472 aa25.17■■□□□ 1.62
PPFIA3-209ENST00000602783 AKR1A1P14550 325 aa25.17■■□□□ 1.62
PPFIA3-209ENST00000602783 Q7L0L9 218 aa25.17■■□□□ 1.62
PPFIA3-209ENST00000602783 RNF180Q86T96 592 aa25.17■■□□□ 1.62
PPFIA3-209ENST00000602783 SMC5Q8IY18 1101 aa25.17■■□□□ 1.62
PPFIA3-209ENST00000602783 RWDD1Q9H446 243 aaPredicted RBP25.17■■□□□ 1.62
PPFIA3-209ENST00000602783 PRDM5Q9NQX1 630 aaPredicted RBP25.17■■□□□ 1.62
PPFIA3-209ENST00000602783 ISY1Q9ULR0 285 aaKnown RBP25.17■■□□□ 1.62
PPFIA3-209ENST00000602783 PLIN4Q96Q06 1357 aa25.17■■□□□ 1.62
PPFIA3-209ENST00000602783 DNAJC25-GNG10A0A024R161 153 aa25.16■■□□□ 1.62
PPFIA3-209ENST00000602783 CTDSPL2Q05D32 466 aa25.16■■□□□ 1.62
PPFIA3-209ENST00000602783 SNX17Q15036 470 aa25.16■■□□□ 1.62
PPFIA3-209ENST00000602783 B4GALNT3Q6L9W6 998 aa25.16■■□□□ 1.62
PPFIA3-209ENST00000602783 MSL3Q8N5Y2 521 aaKnown RBP25.16■■□□□ 1.62
PPFIA3-209ENST00000602783 PHF24Q9UPV7 400 aa25.16■■□□□ 1.62
PPFIA3-209ENST00000602783 TMEM232C9JQI7 657 aa25.15■■□□□ 1.62
PPFIA3-209ENST00000602783 FOXP2O15409 715 aa25.15■■□□□ 1.62
PPFIA3-209ENST00000602783 SNAI1O95863 264 aaPredicted RBP25.15■■□□□ 1.62
PPFIA3-209ENST00000602783 ANKRD35Q8N283 1001 aa25.15■■□□□ 1.62
PPFIA3-209ENST00000602783 LENG1Q96BZ8 264 aaPredicted RBP25.15■■□□□ 1.62
PPFIA3-209ENST00000602783 CHMP4CQ96CF2 233 aa25.15■■□□□ 1.62
PPFIA3-209ENST00000602783 INCENPQ9NQS7 918 aa25.15■■□□□ 1.62
PPFIA3-209ENST00000602783 SYNGAP1Q96PV0 1343 aa25.14■■□□□ 1.62
PPFIA3-209ENST00000602783 C1orf53Q5VUE5 145 aa25.14■■□□□ 1.62
PPFIA3-209ENST00000602783 MAMDC4Q6UXC1 1216 aa25.14■■□□□ 1.62
PPFIA3-209ENST00000602783 CHST13Q8NET6 341 aa25.14■■□□□ 1.62
PPFIA3-209ENST00000602783 FBXO40Q9UH90 709 aa25.14■■□□□ 1.62
PPFIA3-209ENST00000602783 FAM184BQ9ULE4 1060 aa25.14■■□□□ 1.62
PPFIA3-209ENST00000602783 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.14■■□□□ 1.62
PPFIA3-209ENST00000602783 TSPY2A6NKD2 308 aa25.13■■□□□ 1.61
PPFIA3-209ENST00000602783 IGHDP01880 384 aa25.13■■□□□ 1.61
PPFIA3-209ENST00000602783 MCCP23508 829 aa25.13■■□□□ 1.61
PPFIA3-209ENST00000602783 OAZ1P54368 228 aa25.13■■□□□ 1.61
PPFIA3-209ENST00000602783 TLE2Q04725 743 aa25.13■■□□□ 1.61
PPFIA3-209ENST00000602783 IKQ13123 557 aaPredicted RBP25.13■■□□□ 1.61
PPFIA3-209ENST00000602783 VPS53Q5VIR6 699 aa25.13■■□□□ 1.61
PPFIA3-209ENST00000602783 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.13■■□□□ 1.61
PPFIA3-209ENST00000602783 SH3RF1Q7Z6J0 888 aa25.13■■□□□ 1.61
PPFIA3-209ENST00000602783 PDLIM7Q9NR12 457 aa25.13■■□□□ 1.61
PPFIA3-209ENST00000602783 ZHX1Q9UKY1 873 aaPredicted RBP25.13■■□□□ 1.61
PPFIA3-209ENST00000602783 STX8Q9UNK0 236 aa25.13■■□□□ 1.61
PPFIA3-209ENST00000602783 FDX1P10109 184 aa25.12■■□□□ 1.61
PPFIA3-209ENST00000602783 SLC1A4P43007 532 aa25.12■■□□□ 1.61
PPFIA3-209ENST00000602783 STAT2P52630 851 aa25.12■■□□□ 1.61
PPFIA3-209ENST00000602783 PPP4R3BQ5MIZ7 849 aa25.12■■□□□ 1.61
PPFIA3-209ENST00000602783 ZNF467Q7Z7K2 595 aaPredicted RBP25.12■■□□□ 1.61
PPFIA3-209ENST00000602783 CHURC1Q8WUH1 139 aa25.12■■□□□ 1.61
PPFIA3-209ENST00000602783 BADQ92934 168 aa25.12■■□□□ 1.61
PPFIA3-209ENST00000602783 GMCL1Q96IK5 515 aa25.12■■□□□ 1.61
PPFIA3-209ENST00000602783 HOMER2Q9NSB8 354 aa25.12■■□□□ 1.61
PPFIA3-209ENST00000602783 COL6A3P12111 3177 aa25.11■■□□□ 1.61
PPFIA3-209ENST00000602783 TRIM43BA6NCK2 446 aa25.11■■□□□ 1.61
PPFIA3-209ENST00000602783 NMT2O60551 498 aa25.11■■□□□ 1.61
PPFIA3-209ENST00000602783 ADAMTS4O75173 837 aa25.11■■□□□ 1.61
PPFIA3-209ENST00000602783 FAM160B2Q86V87 743 aa25.11■■□□□ 1.61
PPFIA3-209ENST00000602783 CHD1LQ86WJ1 897 aa25.11■■□□□ 1.61
PPFIA3-209ENST00000602783 SLC17A8Q8NDX2 589 aa25.11■■□□□ 1.61
PPFIA3-209ENST00000602783 STAG1Q8WVM7 1258 aa25.11■■□□□ 1.61
PPFIA3-209ENST00000602783 TRIM43Q96BQ3 446 aaPredicted RBP25.11■■□□□ 1.61
PPFIA3-209ENST00000602783 IL17RBQ9NRM6 502 aa25.11■■□□□ 1.61
PPFIA3-209ENST00000602783 HELLSQ9NRZ9 838 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms