RNA–Protein interactions for RNA: ENST00000602056.1

GTPBP3-227, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 2

Gene GTPBP3, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-227ENST00000602056 COL11A1P12107 1806 aaPredicted RBP27.71■■■□□ 2.03
GTPBP3-227ENST00000602056 DNAJC25-GNG10A0A024R161 153 aa27.7■■■□□ 2.02
GTPBP3-227ENST00000602056 TTLL1O95922 423 aa27.7■■■□□ 2.02
GTPBP3-227ENST00000602056 PGK1P00558 417 aa27.7■■■□□ 2.02
GTPBP3-227ENST00000602056 RARBP10826 455 aa27.7■■■□□ 2.02
GTPBP3-227ENST00000602056 CPXCR1Q8N123 301 aa27.7■■■□□ 2.02
GTPBP3-227ENST00000602056 GMCL1P1Q8NEA9 526 aa27.7■■■□□ 2.02
GTPBP3-227ENST00000602056 KIFC2Q96AC6 838 aa27.7■■■□□ 2.02
GTPBP3-227ENST00000602056 SLC38A10Q9HBR0 1119 aa27.7■■■□□ 2.02
GTPBP3-227ENST00000602056 RAVER2Q9HCJ3 691 aaKnown RBP27.7■■■□□ 2.02
GTPBP3-227ENST00000602056 SYNPO2Q9UMS6 1093 aa27.7■■■□□ 2.02
GTPBP3-227ENST00000602056 PHF24Q9UPV7 400 aa27.7■■■□□ 2.02
GTPBP3-227ENST00000602056 PLIN4Q96Q06 1357 aa27.7■■■□□ 2.02
GTPBP3-227ENST00000602056 RRP1P56182 461 aaKnown RBP27.69■■■□□ 2.02
GTPBP3-227ENST00000602056 PPARAQ07869 468 aa27.69■■■□□ 2.02
GTPBP3-227ENST00000602056 CCDC129Q6ZRS4 1044 aa27.69■■■□□ 2.02
GTPBP3-227ENST00000602056 NACAP1Q9BZK3 213 aa27.69■■■□□ 2.02
GTPBP3-227ENST00000602056 ZBED4O75132 1171 aa27.68■■■□□ 2.02
GTPBP3-227ENST00000602056 SNAI1O95863 264 aaPredicted RBP27.68■■■□□ 2.02
GTPBP3-227ENST00000602056 TFAP4Q01664 338 aa27.68■■■□□ 2.02
GTPBP3-227ENST00000602056 C1orf53Q5VUE5 145 aa27.68■■■□□ 2.02
GTPBP3-227ENST00000602056 SH3RF1Q7Z6J0 888 aa27.68■■■□□ 2.02
GTPBP3-227ENST00000602056 NAPBQ9H115 298 aa27.68■■■□□ 2.02
GTPBP3-227ENST00000602056 MTMR10Q9NXD2 777 aa27.68■■■□□ 2.02
GTPBP3-227ENST00000602056 FEM1BQ9UK73 627 aa27.68■■■□□ 2.02
GTPBP3-227ENST00000602056 SLC4A3P48751 1232 aa27.67■■■□□ 2.02
GTPBP3-227ENST00000602056 SLFN13Q68D06 897 aa27.67■■■□□ 2.02
GTPBP3-227ENST00000602056 MAMDC4Q6UXC1 1216 aa27.67■■■□□ 2.02
GTPBP3-227ENST00000602056 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.67■■■□□ 2.02
GTPBP3-227ENST00000602056 FGD4Q96M96 766 aa27.67■■■□□ 2.02
GTPBP3-227ENST00000602056 INCENPQ9NQS7 918 aa27.67■■■□□ 2.02
GTPBP3-227ENST00000602056 PDLIM7Q9NR12 457 aa27.67■■■□□ 2.02
GTPBP3-227ENST00000602056 PRKAG2Q9UGJ0 569 aa27.67■■■□□ 2.02
GTPBP3-227ENST00000602056 TACC3Q9Y6A5 838 aa27.67■■■□□ 2.02
GTPBP3-227ENST00000602056 DNAH12Q6ZR08 3092 aa27.67■■■□□ 2.02
GTPBP3-227ENST00000602056 TRIM43BA6NCK2 446 aa27.66■■■□□ 2.02
GTPBP3-227ENST00000602056 ADAMTS4O75173 837 aa27.66■■■□□ 2.02
GTPBP3-227ENST00000602056 TSPY3P0CV98 308 aa27.66■■■□□ 2.02
GTPBP3-227ENST00000602056 TSPY8P0CW00 308 aa27.66■■■□□ 2.02
GTPBP3-227ENST00000602056 AKR1A1P14550 325 aa27.66■■■□□ 2.02
GTPBP3-227ENST00000602056 PDE4BQ07343 736 aa27.66■■■□□ 2.02
GTPBP3-227ENST00000602056 MSL3Q8N5Y2 521 aaKnown RBP27.66■■■□□ 2.02
GTPBP3-227ENST00000602056 TRIM43Q96BQ3 446 aaPredicted RBP27.66■■■□□ 2.02
GTPBP3-227ENST00000602056 DDX11Q96FC9 970 aa27.66■■■□□ 2.02
GTPBP3-227ENST00000602056 CRBNQ96SW2 442 aa27.66■■■□□ 2.02
GTPBP3-227ENST00000602056 PRDM5Q9NQX1 630 aaPredicted RBP27.66■■■□□ 2.02
GTPBP3-227ENST00000602056 CNPY2Q9Y2B0 182 aa27.66■■■□□ 2.02
GTPBP3-227ENST00000602056 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.66■■■□□ 2.02
GTPBP3-227ENST00000602056 BMP3P12645 472 aa27.65■■■□□ 2.02
GTPBP3-227ENST00000602056 TLE2Q04725 743 aa27.65■■■□□ 2.02
GTPBP3-227ENST00000602056 SYNGAP1Q96PV0 1343 aa27.65■■■□□ 2.02
GTPBP3-227ENST00000602056 VPS53Q5VIR6 699 aa27.64■■■□□ 2.02
GTPBP3-227ENST00000602056 RNF180Q86T96 592 aa27.64■■■□□ 2.02
GTPBP3-227ENST00000602056 BADQ92934 168 aa27.64■■■□□ 2.02
GTPBP3-227ENST00000602056 ZNFX1Q9P2E3 1918 aaKnown RBP27.64■■■□□ 2.02
GTPBP3-227ENST00000602056 ITGB8P26012 769 aa27.63■■■□□ 2.01
GTPBP3-227ENST00000602056 CTDSPL2Q05D32 466 aa27.63■■■□□ 2.01
GTPBP3-227ENST00000602056 ANKRD45Q5TZF3 282 aa27.63■■■□□ 2.01
GTPBP3-227ENST00000602056 ZNF467Q7Z7K2 595 aaPredicted RBP27.63■■■□□ 2.01
GTPBP3-227ENST00000602056 SLC17A8Q8NDX2 589 aa27.63■■■□□ 2.01
GTPBP3-227ENST00000602056 CHMP4CQ96CF2 233 aa27.63■■■□□ 2.01
GTPBP3-227ENST00000602056 IL17RBQ9NRM6 502 aa27.63■■■□□ 2.01
GTPBP3-227ENST00000602056 SMCHD1A6NHR9 2005 aa27.62■■■□□ 2.01
GTPBP3-227ENST00000602056 A0A1W2PQ45 241 aaPredicted RBP27.62■■■□□ 2.01
GTPBP3-227ENST00000602056 A0A1W2PQY0 241 aa27.62■■■□□ 2.01
GTPBP3-227ENST00000602056 TMEM232C9JQI7 657 aa27.62■■■□□ 2.01
GTPBP3-227ENST00000602056 POTEB2H3BUK9 544 aa27.62■■■□□ 2.01
GTPBP3-227ENST00000602056 SLC3A2P08195 630 aaKnown RBP27.62■■■□□ 2.01
GTPBP3-227ENST00000602056 OAZ1P54368 228 aa27.62■■■□□ 2.01
GTPBP3-227ENST00000602056 SHHQ15465 462 aa27.62■■■□□ 2.01
GTPBP3-227ENST00000602056 C9orf50Q5SZB4 431 aa27.62■■■□□ 2.01
GTPBP3-227ENST00000602056 CHST13Q8NET6 341 aa27.62■■■□□ 2.01
GTPBP3-227ENST00000602056 CTDP1Q9Y5B0 961 aaPredicted RBP27.62■■■□□ 2.01
GTPBP3-227ENST00000602056 SYNRGQ9UMZ2 1314 aa27.62■■■□□ 2.01
GTPBP3-227ENST00000602056 ADCY6O43306 1168 aa27.61■■■□□ 2.01
GTPBP3-227ENST00000602056 NMT2O60551 498 aa27.61■■■□□ 2.01
GTPBP3-227ENST00000602056 IRX5P78411 483 aaPredicted RBP27.61■■■□□ 2.01
GTPBP3-227ENST00000602056 CCSAPQ6IQ19 270 aaPredicted RBP27.61■■■□□ 2.01
GTPBP3-227ENST00000602056 ANKRD35Q8N283 1001 aa27.61■■■□□ 2.01
GTPBP3-227ENST00000602056 KLHDC9Q8NEP7 349 aa27.61■■■□□ 2.01
GTPBP3-227ENST00000602056 GMCL1Q96IK5 515 aa27.61■■■□□ 2.01
GTPBP3-227ENST00000602056 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.61■■■□□ 2.01
GTPBP3-227ENST00000602056 ZHX1Q9UKY1 873 aaPredicted RBP27.61■■■□□ 2.01
GTPBP3-227ENST00000602056 FAM184BQ9ULE4 1060 aa27.61■■■□□ 2.01
GTPBP3-227ENST00000602056 ZNF536O15090 1300 aa27.61■■■□□ 2.01
GTPBP3-227ENST00000602056 MYADML2A6NDP7 307 aa27.6■■■□□ 2.01
GTPBP3-227ENST00000602056 MCCP23508 829 aa27.6■■■□□ 2.01
GTPBP3-227ENST00000602056 RASGRP2Q7LDG7 609 aa27.6■■■□□ 2.01
GTPBP3-227ENST00000602056 FBXO40Q9UH90 709 aa27.6■■■□□ 2.01
GTPBP3-227ENST00000602056 STXBP5LQ9Y2K9 1186 aa27.6■■■□□ 2.01
GTPBP3-227ENST00000602056 COL6A3P12111 3177 aa27.6■■■□□ 2.01
GTPBP3-227ENST00000602056 LTBP2Q14767 1821 aa27.6■■■□□ 2.01
GTPBP3-227ENST00000602056 PDE1AP54750 535 aa27.59■■■□□ 2.01
GTPBP3-227ENST00000602056 ACVR2BQ13705 512 aa27.59■■■□□ 2.01
GTPBP3-227ENST00000602056 STAG1Q8WVM7 1258 aa27.59■■■□□ 2.01
GTPBP3-227ENST00000602056 EVI5LQ96CN4 794 aa27.59■■■□□ 2.01
GTPBP3-227ENST00000602056 AGBL1Q96MI9 1066 aa27.59■■■□□ 2.01
GTPBP3-227ENST00000602056 TSEN34Q9BSV6 310 aaKnown RBP27.59■■■□□ 2.01
GTPBP3-227ENST00000602056 HOMER2Q9NSB8 354 aa27.59■■■□□ 2.01
GTPBP3-227ENST00000602056 SLC1A4P43007 532 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms