RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 DGKHQ86XP1 1220 aa13.04□□□□□ -0.32
ARHGEF1-220ENST00000600274 LRRN4CLQ8ND94 238 aa13.04□□□□□ -0.32
ARHGEF1-220ENST00000600274 ZNF287Q9HBT7 754 aa13.04□□□□□ -0.32
ARHGEF1-220ENST00000600274 KCNQ5Q9NR82 932 aa13.04□□□□□ -0.32
ARHGEF1-220ENST00000600274 USP40Q9NVE5 1235 aa13.04□□□□□ -0.32
ARHGEF1-220ENST00000600274 TRPC5Q9UL62 973 aaPredicted RBP13.04□□□□□ -0.32
ARHGEF1-220ENST00000600274 RCAN1P53805 252 aa13.03□□□□□ -0.32
ARHGEF1-220ENST00000600274 SLC35G1Q2M3R5 365 aa13.03□□□□□ -0.32
ARHGEF1-220ENST00000600274 TOGARAM2Q6ZUX3 1019 aa13.03□□□□□ -0.32
ARHGEF1-220ENST00000600274 ZNF579Q8NAF0 562 aaKnown RBP13.03□□□□□ -0.32
ARHGEF1-220ENST00000600274 HPS3Q969F9 1004 aa13.03□□□□□ -0.32
ARHGEF1-220ENST00000600274 RRP36Q96EU6 259 aaKnown RBP13.03□□□□□ -0.32
ARHGEF1-220ENST00000600274 PCDHAC2Q9Y5I4 1007 aa13.03□□□□□ -0.32
ARHGEF1-220ENST00000600274 BMP15O95972 392 aa13.03□□□□□ -0.32
ARHGEF1-220ENST00000600274 ZSCAN20P17040 1043 aaPredicted RBP13.03□□□□□ -0.32
ARHGEF1-220ENST00000600274 MNS1Q8NEH6 495 aa13.03□□□□□ -0.32
ARHGEF1-220ENST00000600274 IRX2Q9BZI1 471 aaPredicted RBP13.03□□□□□ -0.32
ARHGEF1-220ENST00000600274 SOWAHDA6NJG2 315 aa13.03□□□□□ -0.32
ARHGEF1-220ENST00000600274 GNAQP50148 359 aa13.03□□□□□ -0.32
ARHGEF1-220ENST00000600274 KCTD1Q719H9 257 aa13.03□□□□□ -0.32
ARHGEF1-220ENST00000600274 NELFBQ8WX92 580 aa13.03□□□□□ -0.32
ARHGEF1-220ENST00000600274 NUP88Q99567 741 aaPredicted RBP13.03□□□□□ -0.32
ARHGEF1-220ENST00000600274 AKR1B1P15121 316 aa13.02□□□□□ -0.32
ARHGEF1-220ENST00000600274 SNAP25P60880 206 aa13.02□□□□□ -0.32
ARHGEF1-220ENST00000600274 DMTNQ08495 405 aa13.02□□□□□ -0.32
ARHGEF1-220ENST00000600274 ERCC6LQ2NKX8 1250 aa13.02□□□□□ -0.32
ARHGEF1-220ENST00000600274 CCDC148Q8NFR7 591 aa13.02□□□□□ -0.32
ARHGEF1-220ENST00000600274 ENOX1Q8TC92 643 aaKnown RBP13.02□□□□□ -0.32
ARHGEF1-220ENST00000600274 PCDHA6Q9UN73 950 aa13.02□□□□□ -0.32
ARHGEF1-220ENST00000600274 DAGLAQ9Y4D2 1042 aa13.02□□□□□ -0.32
ARHGEF1-220ENST00000600274 PCDHA8Q9Y5H6 950 aa13.02□□□□□ -0.32
ARHGEF1-220ENST00000600274 POLR3GO15318 223 aaPredicted RBP13.02□□□□□ -0.33
ARHGEF1-220ENST00000600274 IDEP14735 1019 aa13.02□□□□□ -0.33
ARHGEF1-220ENST00000600274 GRM4Q14833 912 aa13.02□□□□□ -0.33
ARHGEF1-220ENST00000600274 UBE2SQ16763 222 aa13.02□□□□□ -0.33
ARHGEF1-220ENST00000600274 TXNRD1Q16881 649 aa13.02□□□□□ -0.33
ARHGEF1-220ENST00000600274 KRT27Q7Z3Y8 459 aa13.02□□□□□ -0.33
ARHGEF1-220ENST00000600274 ZFP91Q96JP5 570 aaPredicted RBP13.02□□□□□ -0.33
ARHGEF1-220ENST00000600274 TRIM47Q96LD4 638 aa13.02□□□□□ -0.33
ARHGEF1-220ENST00000600274 FAM237AA0A1B0GTK4 181 aa13.01□□□□□ -0.33
ARHGEF1-220ENST00000600274 APBA3O96018 575 aa13.01□□□□□ -0.33
ARHGEF1-220ENST00000600274 ASIC1P78348 528 aa13.01□□□□□ -0.33
ARHGEF1-220ENST00000600274 RBL2Q08999 1139 aa13.01□□□□□ -0.33
ARHGEF1-220ENST00000600274 TRIM34Q9BYJ4 488 aa13.01□□□□□ -0.33
ARHGEF1-220ENST00000600274 EPC1Q9H2F5 836 aa13.01□□□□□ -0.33
ARHGEF1-220ENST00000600274 TCP11L1Q9NUJ3 509 aa13.01□□□□□ -0.33
ARHGEF1-220ENST00000600274 RPN1P04843 607 aaKnown RBP13.01□□□□□ -0.33
ARHGEF1-220ENST00000600274 FGRP09769 529 aa13.01□□□□□ -0.33
ARHGEF1-220ENST00000600274 CASP14P31944 242 aa13.01□□□□□ -0.33
ARHGEF1-220ENST00000600274 SHROOM1Q2M3G4 852 aaPredicted RBP13.01□□□□□ -0.33
ARHGEF1-220ENST00000600274 TTBK2Q6IQ55 1244 aa13.01□□□□□ -0.33
ARHGEF1-220ENST00000600274 DYMQ7RTS9 669 aa13.01□□□□□ -0.33
ARHGEF1-220ENST00000600274 TBCKQ8TEA7 893 aa13.01□□□□□ -0.33
ARHGEF1-220ENST00000600274 TNFRSF25Q93038 417 aa13.01□□□□□ -0.33
ARHGEF1-220ENST00000600274 MYH15Q9Y2K3 1946 aa13.01□□□□□ -0.33
ARHGEF1-220ENST00000600274 MMP10P09238 476 aa13.01□□□□□ -0.33
ARHGEF1-220ENST00000600274 SPATA1Q5VX52 437 aa13.01□□□□□ -0.33
ARHGEF1-220ENST00000600274 NYAP1Q6ZVC0 841 aa13.01□□□□□ -0.33
ARHGEF1-220ENST00000600274 ANKRD20A12PQ8NF67 263 aa13.01□□□□□ -0.33
ARHGEF1-220ENST00000600274 CDK5RAP3Q96JB5 506 aa13.01□□□□□ -0.33
ARHGEF1-220ENST00000600274 MTRQ99707 1265 aa13.01□□□□□ -0.33
ARHGEF1-220ENST00000600274 PPP2R2CQ9Y2T4 447 aa13.01□□□□□ -0.33
ARHGEF1-220ENST00000600274 DUOX1Q9NRD9 1551 aa13.01□□□□□ -0.33
ARHGEF1-220ENST00000600274 CACNA1SQ13698 1873 aa13.01□□□□□ -0.33
ARHGEF1-220ENST00000600274 CHD4Q14839 1912 aa13□□□□□ -0.33
ARHGEF1-220ENST00000600274 A0A0U1RQJ8 604 aa13□□□□□ -0.33
ARHGEF1-220ENST00000600274 STXBP3O00186 592 aa13□□□□□ -0.33
ARHGEF1-220ENST00000600274 BBOX1O75936 387 aa13□□□□□ -0.33
ARHGEF1-220ENST00000600274 SLU7O95391 586 aaKnown RBP13□□□□□ -0.33
ARHGEF1-220ENST00000600274 TPM1P09493 284 aa13□□□□□ -0.33
ARHGEF1-220ENST00000600274 SARSP49591 514 aaKnown RBP13□□□□□ -0.33
ARHGEF1-220ENST00000600274 RAD51AP2Q09MP3 1159 aa13□□□□□ -0.33
ARHGEF1-220ENST00000600274 PAK1Q13153 545 aa13□□□□□ -0.33
ARHGEF1-220ENST00000600274 ATRIPQ8WXE1 791 aa13□□□□□ -0.33
ARHGEF1-220ENST00000600274 ZHX3Q9H4I2 956 aa13□□□□□ -0.33
ARHGEF1-220ENST00000600274 C6orf50Q9HD87 102 aa13□□□□□ -0.33
ARHGEF1-220ENST00000600274 DDX4Q9NQI0 724 aaKnown RBP13□□□□□ -0.33
ARHGEF1-220ENST00000600274 AKR1B15C9JRZ8 316 aaPredicted RBP13□□□□□ -0.33
ARHGEF1-220ENST00000600274 UBXN1Q04323 297 aa13□□□□□ -0.33
ARHGEF1-220ENST00000600274 NFIAQ12857 509 aa13□□□□□ -0.33
ARHGEF1-220ENST00000600274 NONOQ15233 471 aaKnown RBP eCLIP13□□□□□ -0.33
ARHGEF1-220ENST00000600274 PRCPP42785 496 aa13□□□□□ -0.33
ARHGEF1-220ENST00000600274 SLF2Q8IX21 1173 aa13□□□□□ -0.33
ARHGEF1-220ENST00000600274 GSDMAQ96QA5 445 aa13□□□□□ -0.33
ARHGEF1-220ENST00000600274 CARD6Q9BX69 1037 aa13□□□□□ -0.33
ARHGEF1-220ENST00000600274 BARHL2Q9NY43 387 aa13□□□□□ -0.33
ARHGEF1-220ENST00000600274 MKRN1Q9UHC7 482 aaKnown RBP13□□□□□ -0.33
ARHGEF1-220ENST00000600274 LTBP4Q8N2S1 1624 aa12.99□□□□□ -0.33
ARHGEF1-220ENST00000600274 PLCG2P16885 1265 aa12.99□□□□□ -0.33
ARHGEF1-220ENST00000600274 PLCG1P19174 1290 aa12.99□□□□□ -0.33
ARHGEF1-220ENST00000600274 SKIDA1Q1XH10 827 aa12.99□□□□□ -0.33
ARHGEF1-220ENST00000600274 CABP7Q86V35 215 aa12.99□□□□□ -0.33
ARHGEF1-220ENST00000600274 POTEDQ86YR6 584 aa12.99□□□□□ -0.33
ARHGEF1-220ENST00000600274 REXO1Q8N1G1 1221 aaKnown RBP12.99□□□□□ -0.33
ARHGEF1-220ENST00000600274 TRIML1Q8N9V2 468 aa12.99□□□□□ -0.33
ARHGEF1-220ENST00000600274 CCDC12Q8WUD4 166 aaPredicted RBP12.99□□□□□ -0.33
ARHGEF1-220ENST00000600274 GPR75-ASB3A0A0A6YYF3 556 aa12.99□□□□□ -0.33
ARHGEF1-220ENST00000600274 PPP1R3GB7ZBB8 358 aa12.99□□□□□ -0.33
ARHGEF1-220ENST00000600274 ZSCAN12O43309 604 aa12.99□□□□□ -0.33
ARHGEF1-220ENST00000600274 TAL1P17542 331 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms