RNA–Protein interactions for RNA: ENST00000599804.5

SMG9-209, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-209ENST00000599804 SLF1Q9BQI6 1058 aa19.23■□□□□ 0.67
SMG9-209ENST00000599804 GPCPD1Q9NPB8 672 aa19.23■□□□□ 0.67
SMG9-209ENST00000599804 HOXC10Q9NYD6 342 aa19.23■□□□□ 0.67
SMG9-209ENST00000599804 CPLX1O14810 134 aa19.22■□□□□ 0.67
SMG9-209ENST00000599804 ALDH1A1P00352 501 aa19.22■□□□□ 0.67
SMG9-209ENST00000599804 GOLGA8HP0CJ92 632 aa19.22■□□□□ 0.67
SMG9-209ENST00000599804 CCT2P78371 535 aaKnown RBP19.22■□□□□ 0.67
SMG9-209ENST00000599804 SCRN1Q12765 414 aa19.22■□□□□ 0.67
SMG9-209ENST00000599804 COG2Q14746 738 aa19.22■□□□□ 0.67
SMG9-209ENST00000599804 IFNL1Q8IU54 200 aa19.22■□□□□ 0.67
SMG9-209ENST00000599804 GTF3C2Q8WUA4 911 aaPredicted RBP19.22■□□□□ 0.67
SMG9-209ENST00000599804 TMX3Q96JJ7 454 aa19.22■□□□□ 0.67
SMG9-209ENST00000599804 SPZ1Q9BXG8 430 aa19.22■□□□□ 0.67
SMG9-209ENST00000599804 PPP1R9AQ9ULJ8 1098 aa19.22■□□□□ 0.67
SMG9-209ENST00000599804 K7ELQ4 463 aaPredicted RBP19.21■□□□□ 0.67
SMG9-209ENST00000599804 PDHXO00330 501 aa19.21■□□□□ 0.67
SMG9-209ENST00000599804 AOC2O75106 756 aa19.21■□□□□ 0.67
SMG9-209ENST00000599804 CDKL5O76039 1030 aa19.21■□□□□ 0.67
SMG9-209ENST00000599804 LARGE1O95461 756 aa19.21■□□□□ 0.67
SMG9-209ENST00000599804 CDC27P30260 824 aa19.21■□□□□ 0.67
SMG9-209ENST00000599804 SYDE2Q5VT97 1194 aa19.21■□□□□ 0.67
SMG9-209ENST00000599804 LBX2Q6XYB7 198 aa19.21■□□□□ 0.67
SMG9-209ENST00000599804 FAM43AQ8N2R8 423 aa19.21■□□□□ 0.67
SMG9-209ENST00000599804 PARK7Q99497 189 aaKnown RBP19.21■□□□□ 0.67
SMG9-209ENST00000599804 PTPN18Q99952 460 aa19.21■□□□□ 0.67
SMG9-209ENST00000599804 ASCC2Q9H1I8 757 aaPredicted RBP19.21■□□□□ 0.67
SMG9-209ENST00000599804 RIOX1Q9H6W3 641 aa19.21■□□□□ 0.67
SMG9-209ENST00000599804 FAM217BQ9NTX9 383 aaPredicted RBP19.21■□□□□ 0.67
SMG9-209ENST00000599804 IGF2BP3O00425 579 aaKnown RBP eCLIP19.2■□□□□ 0.66
SMG9-209ENST00000599804 IFNAR1P17181 557 aa19.2■□□□□ 0.66
SMG9-209ENST00000599804 DSG3P32926 999 aa19.2■□□□□ 0.66
SMG9-209ENST00000599804 ADD1P35611 737 aaKnown RBP19.2■□□□□ 0.66
SMG9-209ENST00000599804 BECN1Q14457 450 aa19.2■□□□□ 0.66
SMG9-209ENST00000599804 TTBK2Q6IQ55 1244 aa19.2■□□□□ 0.66
SMG9-209ENST00000599804 MB21D1Q8N884 522 aa19.2■□□□□ 0.66
SMG9-209ENST00000599804 RBM27Q9P2N5 1060 aaKnown RBP19.2■□□□□ 0.66
SMG9-209ENST00000599804 PRR12Q9ULL5 1215 aa19.2■□□□□ 0.66
SMG9-209ENST00000599804 PLEKHA8P1O95397 391 aa19.19■□□□□ 0.66
SMG9-209ENST00000599804 ANP32AP39687 249 aaKnown RBP19.19■□□□□ 0.66
SMG9-209ENST00000599804 NTRK3Q16288 839 aa19.19■□□□□ 0.66
SMG9-209ENST00000599804 ADGRF4Q8IZF3 695 aa19.19■□□□□ 0.66
SMG9-209ENST00000599804 SRBD1Q8N5C6 995 aaKnown RBP19.19■□□□□ 0.66
SMG9-209ENST00000599804 KIFC2Q96AC6 838 aa19.19■□□□□ 0.66
SMG9-209ENST00000599804 ZIC5Q96T25 663 aa19.19■□□□□ 0.66
SMG9-209ENST00000599804 LLPHQ9BRT6 129 aaKnown RBP19.19■□□□□ 0.66
SMG9-209ENST00000599804 UBA5Q9GZZ9 404 aa19.19■□□□□ 0.66
SMG9-209ENST00000599804 NCOA5Q9HCD5 579 aaKnown RBP19.19■□□□□ 0.66
SMG9-209ENST00000599804 FBXO28Q9NVF7 368 aa19.19■□□□□ 0.66
SMG9-209ENST00000599804 ADAMTS5Q9UNA0 930 aa19.19■□□□□ 0.66
SMG9-209ENST00000599804 CNTNAP5Q8WYK1 1306 aa19.19■□□□□ 0.66
SMG9-209ENST00000599804 SPDYE16A6NNV3 312 aaPredicted RBP19.18■□□□□ 0.66
SMG9-209ENST00000599804 SLC16A2P36021 539 aa19.18■□□□□ 0.66
SMG9-209ENST00000599804 GCLCP48506 637 aaPredicted RBP19.18■□□□□ 0.66
SMG9-209ENST00000599804 HERVK_113P62684 666 aa19.18■□□□□ 0.66
SMG9-209ENST00000599804 CCDC83Q8IWF9 413 aa19.18■□□□□ 0.66
SMG9-209ENST00000599804 NECAB1Q8N987 351 aa19.18■□□□□ 0.66
SMG9-209ENST00000599804 SMCR8Q8TEV9 937 aaPredicted RBP19.18■□□□□ 0.66
SMG9-209ENST00000599804 RNF26Q9BY78 433 aaPredicted RBP19.18■□□□□ 0.66
SMG9-209ENST00000599804 TSHZ2Q9NRE2 1034 aa19.18■□□□□ 0.66
SMG9-209ENST00000599804 PNMA2Q9UL42 364 aa19.18■□□□□ 0.66
SMG9-209ENST00000599804 CTDP1Q9Y5B0 961 aaPredicted RBP19.18■□□□□ 0.66
SMG9-209ENST00000599804 ZBED4O75132 1171 aa19.17■□□□□ 0.66
SMG9-209ENST00000599804 AKAP17AQ02040 695 aaKnown RBP19.17■□□□□ 0.66
SMG9-209ENST00000599804 FUT2Q10981 343 aa19.17■□□□□ 0.66
SMG9-209ENST00000599804 CUL4AQ13619 759 aa19.17■□□□□ 0.66
SMG9-209ENST00000599804 TAF1CQ15572 869 aaPredicted RBP19.17■□□□□ 0.66
SMG9-209ENST00000599804 TRIM22Q8IYM9 498 aa19.17■□□□□ 0.66
SMG9-209ENST00000599804 MTMR8Q96EF0 704 aa19.17■□□□□ 0.66
SMG9-209ENST00000599804 RRP36Q96EU6 259 aaKnown RBP19.17■□□□□ 0.66
SMG9-209ENST00000599804 P2RX7Q99572 595 aaKnown RBP19.17■□□□□ 0.66
SMG9-209ENST00000599804 RANBP17Q9H2T7 1088 aaKnown RBP19.17■□□□□ 0.66
SMG9-209ENST00000599804 JMJD4Q9H9V9 463 aa19.17■□□□□ 0.66
SMG9-209ENST00000599804 SEC63Q9UGP8 760 aaKnown RBP19.17■□□□□ 0.66
SMG9-209ENST00000599804 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.17■□□□□ 0.66
SMG9-209ENST00000599804 VWA5AO00534 786 aa19.16■□□□□ 0.66
SMG9-209ENST00000599804 CYTH3O43739 400 aa19.16■□□□□ 0.66
SMG9-209ENST00000599804 OAZ1P54368 228 aa19.16■□□□□ 0.66
SMG9-209ENST00000599804 SSRP1Q08945 709 aaKnown RBP19.16■□□□□ 0.66
SMG9-209ENST00000599804 TRAF1Q13077 416 aa19.16■□□□□ 0.66
SMG9-209ENST00000599804 SAMD1Q6SPF0 538 aaPredicted RBP19.16■□□□□ 0.66
SMG9-209ENST00000599804 NBPF11Q86T75 865 aa19.16■□□□□ 0.66
SMG9-209ENST00000599804 ATG4CQ96DT6 458 aa19.16■□□□□ 0.66
SMG9-209ENST00000599804 CPVLQ9H3G5 476 aa19.16■□□□□ 0.66
SMG9-209ENST00000599804 SLC38A10Q9HBR0 1119 aa19.16■□□□□ 0.66
SMG9-209ENST00000599804 ZFYVE28Q9HCC9 887 aa19.16■□□□□ 0.66
SMG9-209ENST00000599804 STK36Q9NRP7 1315 aa19.16■□□□□ 0.66
SMG9-209ENST00000599804 RBBP6Q7Z6E9 1792 aaKnown RBP19.16■□□□□ 0.66
SMG9-209ENST00000599804 SMCHD1A6NHR9 2005 aa19.15■□□□□ 0.66
SMG9-209ENST00000599804 ZBTB5O15062 677 aa19.15■□□□□ 0.66
SMG9-209ENST00000599804 PRPF3O43395 683 aaKnown RBP19.15■□□□□ 0.66
SMG9-209ENST00000599804 CA12O43570 354 aa19.15■□□□□ 0.66
SMG9-209ENST00000599804 FMNL1O95466 1100 aaPredicted RBP19.15■□□□□ 0.66
SMG9-209ENST00000599804 HMGN5P82970 282 aaKnown RBP19.15■□□□□ 0.66
SMG9-209ENST00000599804 ST3GAL1Q11201 340 aa19.15■□□□□ 0.66
SMG9-209ENST00000599804 CDC37Q16543 378 aaPredicted RBP19.15■□□□□ 0.66
SMG9-209ENST00000599804 CMTR1Q8N1G2 835 aaKnown RBP19.15■□□□□ 0.66
SMG9-209ENST00000599804 CCDC82Q8N4S0 544 aa19.15■□□□□ 0.66
SMG9-209ENST00000599804 NSUN7Q8NE18 718 aaKnown RBP19.15■□□□□ 0.66
SMG9-209ENST00000599804 INTS4Q96HW7 963 aaKnown RBP19.15■□□□□ 0.66
SMG9-209ENST00000599804 VAT1LQ9HCJ6 419 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms