RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 MYH4Q9Y623 1939 aa26.83■■□□□ 1.89
IRF3-220ENST00000598108 A0A0G2JMZ2 1700 aa26.83■■□□□ 1.89
IRF3-220ENST00000598108 STRNO43815 780 aa26.83■■□□□ 1.89
IRF3-220ENST00000598108 ZBED4O75132 1171 aa26.83■■□□□ 1.89
IRF3-220ENST00000598108 SLC25A27O95847 323 aa26.83■■□□□ 1.89
IRF3-220ENST00000598108 HMGCRP04035 888 aa26.83■■□□□ 1.89
IRF3-220ENST00000598108 STAT2P52630 851 aa26.83■■□□□ 1.89
IRF3-220ENST00000598108 TTBK2Q6IQ55 1244 aa26.83■■□□□ 1.89
IRF3-220ENST00000598108 STOX1Q6ZVD7 989 aa26.83■■□□□ 1.89
IRF3-220ENST00000598108 CYB5R4Q7L1T6 521 aa26.83■■□□□ 1.89
IRF3-220ENST00000598108 IQCA1Q86XH1 822 aa26.83■■□□□ 1.89
IRF3-220ENST00000598108 CPXCR1Q8N123 301 aa26.83■■□□□ 1.89
IRF3-220ENST00000598108 NPLOC4Q8TAT6 608 aa26.83■■□□□ 1.89
IRF3-220ENST00000598108 CHURC1Q8WUH1 139 aa26.83■■□□□ 1.89
IRF3-220ENST00000598108 DCAF4Q8WV16 495 aa26.83■■□□□ 1.89
IRF3-220ENST00000598108 ANKS1AQ92625 1134 aa26.83■■□□□ 1.89
IRF3-220ENST00000598108 ZSCAN10Q96SZ4 725 aaPredicted RBP26.83■■□□□ 1.89
IRF3-220ENST00000598108 APBA2Q99767 749 aa26.83■■□□□ 1.89
IRF3-220ENST00000598108 RAVER2Q9HCJ3 691 aaKnown RBP26.83■■□□□ 1.89
IRF3-220ENST00000598108 PLXNB2O15031 1838 aa26.83■■□□□ 1.89
IRF3-220ENST00000598108 PLA2G6O60733 806 aa26.82■■□□□ 1.88
IRF3-220ENST00000598108 COBLO75128 1261 aa26.82■■□□□ 1.88
IRF3-220ENST00000598108 ADORA2AP29274 412 aa26.82■■□□□ 1.88
IRF3-220ENST00000598108 CCDC96Q2M329 555 aa26.82■■□□□ 1.88
IRF3-220ENST00000598108 FAM160B2Q86V87 743 aa26.82■■□□□ 1.88
IRF3-220ENST00000598108 ENAHQ8N8S7 591 aaPredicted RBP26.82■■□□□ 1.88
IRF3-220ENST00000598108 FLRT1Q9NZU1 646 aa26.82■■□□□ 1.88
IRF3-220ENST00000598108 E7EWF7 191 aa26.81■■□□□ 1.88
IRF3-220ENST00000598108 ATP2A1O14983 1001 aa26.81■■□□□ 1.88
IRF3-220ENST00000598108 HOXC6P09630 235 aa26.81■■□□□ 1.88
IRF3-220ENST00000598108 PDHBP11177 359 aa26.81■■□□□ 1.88
IRF3-220ENST00000598108 SNAP25P60880 206 aa26.81■■□□□ 1.88
IRF3-220ENST00000598108 MLLT1Q03111 559 aaPredicted RBP26.81■■□□□ 1.88
IRF3-220ENST00000598108 IKQ13123 557 aaPredicted RBP26.81■■□□□ 1.88
IRF3-220ENST00000598108 SNRNP48Q6IEG0 339 aaKnown RBP26.81■■□□□ 1.88
IRF3-220ENST00000598108 TEX13BQ9BXU2 312 aa26.81■■□□□ 1.88
IRF3-220ENST00000598108 FRMPD2Q68DX3 1309 aaPredicted RBP26.81■■□□□ 1.88
IRF3-220ENST00000598108 CDC45O75419 566 aa26.8■■□□□ 1.88
IRF3-220ENST00000598108 ZKSCAN1P17029 563 aaPredicted RBP26.8■■□□□ 1.88
IRF3-220ENST00000598108 SLC16A2P36021 539 aa26.8■■□□□ 1.88
IRF3-220ENST00000598108 CCDC178Q5BJE1 867 aa26.8■■□□□ 1.88
IRF3-220ENST00000598108 ABRAQ8N0Z2 381 aa26.8■■□□□ 1.88
IRF3-220ENST00000598108 GPCPD1Q9NPB8 672 aa26.8■■□□□ 1.88
IRF3-220ENST00000598108 ANO2Q9NQ90 1003 aa26.8■■□□□ 1.88
IRF3-220ENST00000598108 PRR12Q9ULL5 1215 aa26.8■■□□□ 1.88
IRF3-220ENST00000598108 TNKSO95271 1327 aa26.8■■□□□ 1.88
IRF3-220ENST00000598108 LAMA4Q16363 1823 aa26.79■■□□□ 1.88
IRF3-220ENST00000598108 PARP14Q460N5 1801 aa26.79■■□□□ 1.88
IRF3-220ENST00000598108 GJB1P08034 283 aa26.79■■□□□ 1.88
IRF3-220ENST00000598108 FCER1AP12319 257 aa26.79■■□□□ 1.88
IRF3-220ENST00000598108 SLC4A3P48751 1232 aa26.79■■□□□ 1.88
IRF3-220ENST00000598108 DPP9Q86TI2 863 aa26.79■■□□□ 1.88
IRF3-220ENST00000598108 TRMT44Q8IYL2 757 aaKnown RBP26.79■■□□□ 1.88
IRF3-220ENST00000598108 CTDP1Q9Y5B0 961 aaPredicted RBP26.79■■□□□ 1.88
IRF3-220ENST00000598108 SNHG28P0DPA3 235 aa26.78■■□□□ 1.88
IRF3-220ENST00000598108 TRDNQ13061 729 aa26.78■■□□□ 1.88
IRF3-220ENST00000598108 SEC23AQ15436 765 aa26.78■■□□□ 1.88
IRF3-220ENST00000598108 MAP3K21Q5TCX8 1036 aa26.78■■□□□ 1.88
IRF3-220ENST00000598108 BTNL9Q6UXG8 535 aa26.78■■□□□ 1.88
IRF3-220ENST00000598108 MMP19Q99542 508 aa26.78■■□□□ 1.88
IRF3-220ENST00000598108 UBAC1Q9BSL1 405 aa26.78■■□□□ 1.88
IRF3-220ENST00000598108 PAK6Q9NQU5 681 aaPredicted RBP26.78■■□□□ 1.88
IRF3-220ENST00000598108 ZNF536O15090 1300 aa26.77■■□□□ 1.88
IRF3-220ENST00000598108 IGHA2P01877 340 aa26.77■■□□□ 1.88
IRF3-220ENST00000598108 FDX1P10109 184 aa26.77■■□□□ 1.88
IRF3-220ENST00000598108 PRKAR2AP13861 404 aaKnown RBP26.77■■□□□ 1.88
IRF3-220ENST00000598108 GJA8P48165 433 aa26.77■■□□□ 1.88
IRF3-220ENST00000598108 CACNB2Q08289 660 aaPredicted RBP26.77■■□□□ 1.88
IRF3-220ENST00000598108 ZNF543Q08ER8 600 aa26.77■■□□□ 1.88
IRF3-220ENST00000598108 PNMA1Q8ND90 353 aa26.77■■□□□ 1.88
IRF3-220ENST00000598108 SHISA4Q96DD7 197 aa26.77■■□□□ 1.88
IRF3-220ENST00000598108 AGBL1Q96MI9 1066 aa26.77■■□□□ 1.88
IRF3-220ENST00000598108 KAT14Q9H8E8 782 aa26.77■■□□□ 1.88
IRF3-220ENST00000598108 MKI67P46013 3256 aaKnown RBP26.77■■□□□ 1.88
IRF3-220ENST00000598108 SLC27A2O14975 620 aa26.76■■□□□ 1.87
IRF3-220ENST00000598108 PGK2P07205 417 aa26.76■■□□□ 1.87
IRF3-220ENST00000598108 COPB2P35606 906 aa26.76■■□□□ 1.87
IRF3-220ENST00000598108 OAZ1P54368 228 aa26.76■■□□□ 1.87
IRF3-220ENST00000598108 NECTIN1Q15223 517 aa26.76■■□□□ 1.87
IRF3-220ENST00000598108 DEFB118Q96PH6 123 aa26.76■■□□□ 1.87
IRF3-220ENST00000598108 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.76■■□□□ 1.873e-11■■■□□ 15.6
IRF3-220ENST00000598108 RPTORQ8N122 1335 aa26.75■■□□□ 1.87
IRF3-220ENST00000598108 GOLGA8HP0CJ92 632 aa26.75■■□□□ 1.87
IRF3-220ENST00000598108 COL9A3Q14050 684 aaPredicted RBP26.75■■□□□ 1.87
IRF3-220ENST00000598108 SYDE2Q5VT97 1194 aa26.75■■□□□ 1.87
IRF3-220ENST00000598108 CREB3L3Q68CJ9 461 aa26.75■■□□□ 1.87
IRF3-220ENST00000598108 CCDC174Q6PII3 467 aa26.75■■□□□ 1.87
IRF3-220ENST00000598108 CASC1Q6TDU7 716 aa26.75■■□□□ 1.87
IRF3-220ENST00000598108 CHST3Q7LGC8 479 aa26.75■■□□□ 1.87
IRF3-220ENST00000598108 NCOA7Q8NI08 942 aa26.75■■□□□ 1.87
IRF3-220ENST00000598108 U2AF1L4Q8WU68 220 aaKnown RBP26.75■■□□□ 1.87
IRF3-220ENST00000598108 HMX1Q9NP08 348 aaPredicted RBP26.75■■□□□ 1.87
IRF3-220ENST00000598108 CYP2C19P33261 490 aa26.74■■□□□ 1.87
IRF3-220ENST00000598108 KCTD2Q14681 263 aa26.74■■□□□ 1.87
IRF3-220ENST00000598108 RALYLQ86SE5 291 aaKnown RBP26.74■■□□□ 1.87
IRF3-220ENST00000598108 SENP2Q9HC62 589 aa26.74■■□□□ 1.87
IRF3-220ENST00000598108 SGPL1O95470 568 aa26.73■■□□□ 1.87
IRF3-220ENST00000598108 TAL1P17542 331 aaPredicted RBP26.73■■□□□ 1.87
IRF3-220ENST00000598108 ANTXR2P58335 489 aa26.73■■□□□ 1.87
IRF3-220ENST00000598108 IFIT1BQ5T764 474 aaKnown RBP26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms