RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 B4GALNT3Q6L9W6 998 aa20.25■□□□□ 0.83
CCDC9-202ENST00000595659 FERMT2Q96AC1 680 aa20.25■□□□□ 0.83
CCDC9-202ENST00000595659 EVI5LQ96CN4 794 aa20.25■□□□□ 0.83
CCDC9-202ENST00000595659 LNPKQ9C0E8 428 aa20.25■□□□□ 0.83
CCDC9-202ENST00000595659 KBTBD13C9JR72 458 aa20.24■□□□□ 0.83
CCDC9-202ENST00000595659 COPB2P35606 906 aa20.24■□□□□ 0.83
CCDC9-202ENST00000595659 RTP1P59025 263 aa20.24■□□□□ 0.83
CCDC9-202ENST00000595659 GMCL1P1Q8NEA9 526 aa20.24■□□□□ 0.83
CCDC9-202ENST00000595659 FAM227BQ96M60 508 aa20.24■□□□□ 0.83
CCDC9-202ENST00000595659 ATP11BQ9Y2G3 1177 aa20.24■□□□□ 0.83
CCDC9-202ENST00000595659 TACC3Q9Y6A5 838 aa20.24■□□□□ 0.83
CCDC9-202ENST00000595659 NMT2O60551 498 aa20.23■□□□□ 0.83
CCDC9-202ENST00000595659 BMP3P12645 472 aa20.23■□□□□ 0.83
CCDC9-202ENST00000595659 ADCYAP1R1P41586 468 aa20.23■□□□□ 0.83
CCDC9-202ENST00000595659 LRRC41Q15345 812 aa20.23■□□□□ 0.83
CCDC9-202ENST00000595659 LENG1Q96BZ8 264 aaPredicted RBP20.23■□□□□ 0.83
CCDC9-202ENST00000595659 DDX11Q96FC9 970 aa20.23■□□□□ 0.83
CCDC9-202ENST00000595659 SLC38A10Q9HBR0 1119 aa20.23■□□□□ 0.83
CCDC9-202ENST00000595659 FEM1BQ9UK73 627 aa20.23■□□□□ 0.83
CCDC9-202ENST00000595659 MTMR7Q9Y216 660 aa20.23■□□□□ 0.83
CCDC9-202ENST00000595659 DIS3Q9Y2L1 958 aaKnown RBP20.23■□□□□ 0.83
CCDC9-202ENST00000595659 SZT2Q5T011 3432 aa20.23■□□□□ 0.83
CCDC9-202ENST00000595659 MYH8P13535 1937 aa20.23■□□□□ 0.83
CCDC9-202ENST00000595659 TSPY2A6NKD2 308 aa20.22■□□□□ 0.83
CCDC9-202ENST00000595659 TMEM232C9JQI7 657 aa20.22■□□□□ 0.83
CCDC9-202ENST00000595659 PGK1P00558 417 aa20.22■□□□□ 0.83
CCDC9-202ENST00000595659 MCCP23508 829 aa20.22■□□□□ 0.83
CCDC9-202ENST00000595659 SLC39A5Q6ZMH5 540 aa20.22■□□□□ 0.83
CCDC9-202ENST00000595659 TDHQ8IZJ6 230 aa20.22■□□□□ 0.83
CCDC9-202ENST00000595659 XPNPEP3Q9NQH7 507 aa20.22■□□□□ 0.83
CCDC9-202ENST00000595659 IL17RBQ9NRM6 502 aa20.22■□□□□ 0.83
CCDC9-202ENST00000595659 STX8Q9UNK0 236 aa20.22■□□□□ 0.83
CCDC9-202ENST00000595659 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.22■□□□□ 0.83
CCDC9-202ENST00000595659 ZNF236Q9UL36 1845 aa20.22■□□□□ 0.83
CCDC9-202ENST00000595659 A0A0D9SFI3 127 aa20.21■□□□□ 0.83
CCDC9-202ENST00000595659 RANBP6O60518 1105 aaKnown RBP20.21■□□□□ 0.83
CCDC9-202ENST00000595659 ZNF865P0CJ78 1059 aaPredicted RBP20.21■□□□□ 0.83
CCDC9-202ENST00000595659 RARBP10826 455 aa20.21■□□□□ 0.83
CCDC9-202ENST00000595659 SNAP25P60880 206 aa20.21■□□□□ 0.83
CCDC9-202ENST00000595659 RASGRP2Q7LDG7 609 aa20.21■□□□□ 0.83
CCDC9-202ENST00000595659 HOMER2Q9NSB8 354 aa20.21■□□□□ 0.83
CCDC9-202ENST00000595659 PLIN4Q96Q06 1357 aa20.21■□□□□ 0.83
CCDC9-202ENST00000595659 TRIM6-TRIM34B2RNG4 842 aa20.2■□□□□ 0.82
CCDC9-202ENST00000595659 ATP2A1O14983 1001 aa20.2■□□□□ 0.82
CCDC9-202ENST00000595659 IKQ13123 557 aaPredicted RBP20.2■□□□□ 0.82
CCDC9-202ENST00000595659 KCTD1Q719H9 257 aa20.2■□□□□ 0.82
CCDC9-202ENST00000595659 ANKRD35Q8N283 1001 aa20.2■□□□□ 0.82
CCDC9-202ENST00000595659 LBHD1Q9BQE6 289 aaPredicted RBP20.2■□□□□ 0.82
CCDC9-202ENST00000595659 HELLSQ9NRZ9 838 aa20.2■□□□□ 0.82
CCDC9-202ENST00000595659 NRBP1Q9UHY1 535 aa20.2■□□□□ 0.82
CCDC9-202ENST00000595659 SYNPO2Q9UMS6 1093 aa20.2■□□□□ 0.82
CCDC9-202ENST00000595659 CNPY2Q9Y2B0 182 aa20.2■□□□□ 0.82
CCDC9-202ENST00000595659 GREB1LQ9C091 1923 aaPredicted RBP20.19■□□□□ 0.82
CCDC9-202ENST00000595659 DNAJC25-GNG10A0A024R161 153 aa20.19■□□□□ 0.82
CCDC9-202ENST00000595659 SNAI1O95863 264 aaPredicted RBP20.19■□□□□ 0.82
CCDC9-202ENST00000595659 IGHDP01880 384 aa20.19■□□□□ 0.82
CCDC9-202ENST00000595659 SLC1A4P43007 532 aa20.19■□□□□ 0.82
CCDC9-202ENST00000595659 NMIQ13287 307 aaPredicted RBP20.19■□□□□ 0.82
CCDC9-202ENST00000595659 TRIM60Q495X7 471 aa20.19■□□□□ 0.82
CCDC9-202ENST00000595659 MCMDC2Q4G0Z9 681 aa20.19■□□□□ 0.82
CCDC9-202ENST00000595659 RRP12Q5JTH9 1297 aaKnown RBP20.19■□□□□ 0.82
CCDC9-202ENST00000595659 RILPL2Q969X0 211 aa20.19■□□□□ 0.82
CCDC9-202ENST00000595659 PRDM5Q9NQX1 630 aaPredicted RBP20.19■□□□□ 0.82
CCDC9-202ENST00000595659 TOMM22Q9NS69 142 aa20.19■□□□□ 0.82
CCDC9-202ENST00000595659 ZHX1Q9UKY1 873 aaPredicted RBP20.19■□□□□ 0.82
CCDC9-202ENST00000595659 FGAP02671 866 aa20.18■□□□□ 0.82
CCDC9-202ENST00000595659 STAT2P52630 851 aa20.18■□□□□ 0.82
CCDC9-202ENST00000595659 ZNF589Q86UQ0 364 aaPredicted RBP20.18■□□□□ 0.82
CCDC9-202ENST00000595659 EXOC6Q8TAG9 804 aa20.18■□□□□ 0.82
CCDC9-202ENST00000595659 STAG1Q8WVM7 1258 aa20.18■□□□□ 0.82
CCDC9-202ENST00000595659 AGBL1Q96MI9 1066 aa20.18■□□□□ 0.82
CCDC9-202ENST00000595659 PRKAG2Q9UGJ0 569 aa20.18■□□□□ 0.82
CCDC9-202ENST00000595659 ANAPC4Q9UJX5 808 aa20.18■□□□□ 0.82
CCDC9-202ENST00000595659 AKR1A1P14550 325 aa20.17■□□□□ 0.82
CCDC9-202ENST00000595659 HAND2P61296 217 aa20.17■□□□□ 0.82
CCDC9-202ENST00000595659 ALX1Q15699 326 aa20.17■□□□□ 0.82
CCDC9-202ENST00000595659 CCDC174Q6PII3 467 aa20.17■□□□□ 0.82
CCDC9-202ENST00000595659 CHURC1Q8WUH1 139 aa20.17■□□□□ 0.82
CCDC9-202ENST00000595659 GMCL1Q96IK5 515 aa20.17■□□□□ 0.82
CCDC9-202ENST00000595659 RWDD1Q9H446 243 aaPredicted RBP20.17■□□□□ 0.82
CCDC9-202ENST00000595659 OAZ1P54368 228 aa20.16■□□□□ 0.82
CCDC9-202ENST00000595659 IRX5P78411 483 aaPredicted RBP20.16■□□□□ 0.82
CCDC9-202ENST00000595659 CNTN2Q02246 1040 aa20.16■□□□□ 0.82
CCDC9-202ENST00000595659 LRIT3Q3SXY7 679 aa20.16■□□□□ 0.82
CCDC9-202ENST00000595659 RCSD1Q6JBY9 416 aa20.16■□□□□ 0.82
CCDC9-202ENST00000595659 MAMDC4Q6UXC1 1216 aa20.16■□□□□ 0.82
CCDC9-202ENST00000595659 Q7L0L9 218 aa20.16■□□□□ 0.82
CCDC9-202ENST00000595659 SH3RF1Q7Z6J0 888 aa20.16■□□□□ 0.82
CCDC9-202ENST00000595659 RNF180Q86T96 592 aa20.16■□□□□ 0.82
CCDC9-202ENST00000595659 FAM160B2Q86V87 743 aa20.16■□□□□ 0.82
CCDC9-202ENST00000595659 SMC5Q8IY18 1101 aa20.16■□□□□ 0.82
CCDC9-202ENST00000595659 CHST13Q8NET6 341 aa20.16■□□□□ 0.82
CCDC9-202ENST00000595659 FGD4Q96M96 766 aa20.16■□□□□ 0.82
CCDC9-202ENST00000595659 PHF24Q9UPV7 400 aa20.16■□□□□ 0.82
CCDC9-202ENST00000595659 DNAH12Q6ZR08 3092 aa20.16■□□□□ 0.82
CCDC9-202ENST00000595659 ZNF536O15090 1300 aa20.16■□□□□ 0.82
CCDC9-202ENST00000595659 COL11A1P12107 1806 aaPredicted RBP20.16■□□□□ 0.82
CCDC9-202ENST00000595659 PARP14Q460N5 1801 aa20.16■□□□□ 0.82
CCDC9-202ENST00000595659 HSPD1P10809 573 aaKnown RBP20.15■□□□□ 0.82
CCDC9-202ENST00000595659 TLE2Q04725 743 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms