RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 CCDC17Q96LX7 622 aa12.27□□□□□ -0.45
SMCO4P1-201ENST00000592909 CCDC8Q9H0W5 538 aaPredicted RBP12.27□□□□□ -0.45
SMCO4P1-201ENST00000592909 NKX2-4Q9H2Z4 354 aa12.27□□□□□ -0.45
SMCO4P1-201ENST00000592909 PPP1R9AQ9ULJ8 1098 aa12.27□□□□□ -0.45
SMCO4P1-201ENST00000592909 YBX2Q9Y2T7 364 aaKnown RBP12.27□□□□□ -0.45
SMCO4P1-201ENST00000592909 DNAJC25-GNG10A0A024R161 153 aa12.26□□□□□ -0.45
SMCO4P1-201ENST00000592909 TLR3O15455 904 aaKnown RBP12.26□□□□□ -0.45
SMCO4P1-201ENST00000592909 CD4P01730 458 aa12.26□□□□□ -0.45
SMCO4P1-201ENST00000592909 FGBP02675 491 aa12.26□□□□□ -0.45
SMCO4P1-201ENST00000592909 GJA9P57773 515 aa12.26□□□□□ -0.45
SMCO4P1-201ENST00000592909 ZNF467Q7Z7K2 595 aaPredicted RBP12.26□□□□□ -0.45
SMCO4P1-201ENST00000592909 CLEC10AQ8IUN9 316 aa12.26□□□□□ -0.45
SMCO4P1-201ENST00000592909 VTI1AQ96AJ9 217 aa12.26□□□□□ -0.45
SMCO4P1-201ENST00000592909 PPP1R12CQ9BZL4 782 aa12.26□□□□□ -0.45
SMCO4P1-201ENST00000592909 UPF3AQ9H1J1 476 aaKnown RBP12.26□□□□□ -0.45
SMCO4P1-201ENST00000592909 SPC25Q9HBM1 224 aa12.26□□□□□ -0.45
SMCO4P1-201ENST00000592909 DCP1AQ9NPI6 582 aaPredicted RBP12.26□□□□□ -0.45
SMCO4P1-201ENST00000592909 FBXO28Q9NVF7 368 aa12.26□□□□□ -0.45
SMCO4P1-201ENST00000592909 PIEZO1Q92508 2521 aa12.26□□□□□ -0.45
SMCO4P1-201ENST00000592909 ERC2O15083 957 aa12.25□□□□□ -0.45
SMCO4P1-201ENST00000592909 BCAR3O75815 825 aa12.25□□□□□ -0.45
SMCO4P1-201ENST00000592909 C6orf222P0C671 652 aaPredicted RBP12.25□□□□□ -0.45
SMCO4P1-201ENST00000592909 CYP2D6P10635 497 aa12.25□□□□□ -0.45
SMCO4P1-201ENST00000592909 POU3F3P20264 500 aaPredicted RBP12.25□□□□□ -0.45
SMCO4P1-201ENST00000592909 CYP2C18P33260 490 aa12.25□□□□□ -0.45
SMCO4P1-201ENST00000592909 NKX3-2P78367 333 aa12.25□□□□□ -0.45
SMCO4P1-201ENST00000592909 IRX5P78411 483 aaPredicted RBP12.25□□□□□ -0.45
SMCO4P1-201ENST00000592909 ACVR2BQ13705 512 aa12.25□□□□□ -0.45
SMCO4P1-201ENST00000592909 SDR42E1Q8WUS8 393 aa12.25□□□□□ -0.45
SMCO4P1-201ENST00000592909 DYNLL2Q96FJ2 89 aa12.25□□□□□ -0.45
SMCO4P1-201ENST00000592909 LRFN3Q9BTN0 628 aa12.25□□□□□ -0.45
SMCO4P1-201ENST00000592909 ZHX1Q9UKY1 873 aaPredicted RBP12.25□□□□□ -0.45
SMCO4P1-201ENST00000592909 HCN4Q9Y3Q4 1203 aa12.25□□□□□ -0.45
SMCO4P1-201ENST00000592909 APBB1O00213 710 aa12.24□□□□□ -0.45
SMCO4P1-201ENST00000592909 EEF2P13639 858 aaKnown RBP12.24□□□□□ -0.45
SMCO4P1-201ENST00000592909 PDE6AP16499 860 aa12.24□□□□□ -0.45
SMCO4P1-201ENST00000592909 TFF2Q03403 129 aa12.24□□□□□ -0.45
SMCO4P1-201ENST00000592909 TTF1Q15361 905 aaPredicted RBP12.24□□□□□ -0.45
SMCO4P1-201ENST00000592909 GNASQ5JWF2 1037 aa12.24□□□□□ -0.45
SMCO4P1-201ENST00000592909 SLC9C2Q5TAH2 1124 aa12.24□□□□□ -0.45
SMCO4P1-201ENST00000592909 SLC43A3Q8NBI5 491 aa12.24□□□□□ -0.45
SMCO4P1-201ENST00000592909 DDX11Q96FC9 970 aa12.24□□□□□ -0.45
SMCO4P1-201ENST00000592909 TEX13BQ9BXU2 312 aa12.24□□□□□ -0.45
SMCO4P1-201ENST00000592909 ABHD16BQ9H3Z7 469 aa12.24□□□□□ -0.45
SMCO4P1-201ENST00000592909 EPHX3Q9H6B9 360 aa12.24□□□□□ -0.45
SMCO4P1-201ENST00000592909 KANSL2Q9H9L4 492 aa12.24□□□□□ -0.45
SMCO4P1-201ENST00000592909 TNNQ9UQP3 1299 aa12.24□□□□□ -0.45
SMCO4P1-201ENST00000592909 MYO5AQ9Y4I1 1855 aaKnown RBP12.23□□□□□ -0.45
SMCO4P1-201ENST00000592909 CTAGE5O15320 804 aa12.23□□□□□ -0.45
SMCO4P1-201ENST00000592909 ADCY6O43306 1168 aa12.23□□□□□ -0.45
SMCO4P1-201ENST00000592909 KCNQ1P51787 676 aa12.23□□□□□ -0.45
SMCO4P1-201ENST00000592909 CCDC144BQ3MJ40 725 aa12.23□□□□□ -0.45
SMCO4P1-201ENST00000592909 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.23□□□□□ -0.45
SMCO4P1-201ENST00000592909 OTOP2Q7RTS6 562 aa12.23□□□□□ -0.45
SMCO4P1-201ENST00000592909 LCORLQ8N3X6 602 aa12.23□□□□□ -0.45
SMCO4P1-201ENST00000592909 SEZ6LQ9BYH1 1024 aa12.23□□□□□ -0.45
SMCO4P1-201ENST00000592909 HIPK3Q9H422 1215 aa12.23□□□□□ -0.45
SMCO4P1-201ENST00000592909 GOPCQ9HD26 462 aa12.23□□□□□ -0.45
SMCO4P1-201ENST00000592909 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.23□□□□□ -0.45
SMCO4P1-201ENST00000592909 PCDHA11Q9Y5I1 949 aa12.23□□□□□ -0.45
SMCO4P1-201ENST00000592909 PLXNA1Q9UIW2 1896 aa12.23□□□□□ -0.45
SMCO4P1-201ENST00000592909 CHD9Q3L8U1 2897 aa12.22□□□□□ -0.45
SMCO4P1-201ENST00000592909 ZNF532Q9HCE3 1301 aa12.22□□□□□ -0.45
SMCO4P1-201ENST00000592909 ZNFX1Q9P2E3 1918 aaKnown RBP12.22□□□□□ -0.45
SMCO4P1-201ENST00000592909 TCRBV5S4A2TA0A5A2 114 aa12.22□□□□□ -0.45
SMCO4P1-201ENST00000592909 ATP2A1O14983 1001 aa12.22□□□□□ -0.45
SMCO4P1-201ENST00000592909 CDK8P49336 464 aa12.22□□□□□ -0.45
SMCO4P1-201ENST00000592909 RABGGTBP53611 331 aa12.22□□□□□ -0.45
SMCO4P1-201ENST00000592909 TMEM31Q5JXX7 168 aa12.22□□□□□ -0.45
SMCO4P1-201ENST00000592909 FAM83BQ5T0W9 1011 aa12.22□□□□□ -0.45
SMCO4P1-201ENST00000592909 C12orf60Q5U649 245 aa12.22□□□□□ -0.45
SMCO4P1-201ENST00000592909 PPP2R2DQ66LE6 453 aa12.22□□□□□ -0.45
SMCO4P1-201ENST00000592909 SNRNP48Q6IEG0 339 aaKnown RBP12.22□□□□□ -0.45
SMCO4P1-201ENST00000592909 MICALL1Q8N3F8 863 aa12.22□□□□□ -0.45
SMCO4P1-201ENST00000592909 TMEM57Q8N5G2 664 aa12.22□□□□□ -0.45
SMCO4P1-201ENST00000592909 CLUAP1Q96AJ1 413 aa12.22□□□□□ -0.45
SMCO4P1-201ENST00000592909 ATP8A2Q9NTI2 1148 aa12.22□□□□□ -0.45
SMCO4P1-201ENST00000592909 COG5Q9UP83 839 aa12.22□□□□□ -0.45
SMCO4P1-201ENST00000592909 RIPK3Q9Y572 518 aa12.22□□□□□ -0.45
SMCO4P1-201ENST00000592909 SLC4A7Q9Y6M7 1214 aa12.22□□□□□ -0.45
SMCO4P1-201ENST00000592909 UMODL1Q5DID0 1318 aa12.21□□□□□ -0.45
SMCO4P1-201ENST00000592909 GPR37L1O60883 481 aa12.21□□□□□ -0.45
SMCO4P1-201ENST00000592909 CABYRO75952 493 aa12.21□□□□□ -0.45
SMCO4P1-201ENST00000592909 SKIV2LQ15477 1246 aaKnown RBP12.21□□□□□ -0.45
SMCO4P1-201ENST00000592909 C16orf86Q6ZW13 317 aa12.21□□□□□ -0.45
SMCO4P1-201ENST00000592909 RPUSD2Q8IZ73 545 aaKnown RBP12.21□□□□□ -0.45
SMCO4P1-201ENST00000592909 FGD4Q96M96 766 aa12.21□□□□□ -0.45
SMCO4P1-201ENST00000592909 SLF1Q9BQI6 1058 aa12.21□□□□□ -0.45
SMCO4P1-201ENST00000592909 NOC4LQ9BVI4 516 aaKnown RBP12.21□□□□□ -0.45
SMCO4P1-201ENST00000592909 KATNBL1Q9H079 304 aa12.21□□□□□ -0.45
SMCO4P1-201ENST00000592909 MTCH2Q9Y6C9 303 aa12.21□□□□□ -0.45
SMCO4P1-201ENST00000592909 SMIM22K7EJ46 135 aa12.2□□□□□ -0.46
SMCO4P1-201ENST00000592909 GTPBP6O43824 516 aaPredicted RBP12.2□□□□□ -0.46
SMCO4P1-201ENST00000592909 TLL1O43897 1013 aa12.2□□□□□ -0.46
SMCO4P1-201ENST00000592909 MYOGP15173 224 aa12.2□□□□□ -0.46
SMCO4P1-201ENST00000592909 CCL23P55773 120 aa12.2□□□□□ -0.46
SMCO4P1-201ENST00000592909 CXCL17Q6UXB2 119 aa12.2□□□□□ -0.46
SMCO4P1-201ENST00000592909 ARMCX2Q7L311 632 aa12.2□□□□□ -0.46
SMCO4P1-201ENST00000592909 AACSQ86V21 672 aa12.2□□□□□ -0.46
SMCO4P1-201ENST00000592909 PRPF38AQ8NAV1 312 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms