RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 SLC8A3P57103 927 aa14.1□□□□□ -0.15
DNMT1-228ENST00000592705 PPFIA1Q13136 1202 aa14.1□□□□□ -0.15
DNMT1-228ENST00000592705 CFAP221Q4G0U5 840 aa14.1□□□□□ -0.15
DNMT1-228ENST00000592705 CSRNP1Q96S65 589 aa14.1□□□□□ -0.15
DNMT1-228ENST00000592705 NDUFAB1O14561 156 aa14.1□□□□□ -0.15
DNMT1-228ENST00000592705 LARGE1O95461 756 aa14.1□□□□□ -0.15
DNMT1-228ENST00000592705 GYG1P46976 350 aa14.1□□□□□ -0.15
DNMT1-228ENST00000592705 CHRNDQ07001 517 aa14.1□□□□□ -0.15
DNMT1-228ENST00000592705 PAK2Q13177 524 aa14.1□□□□□ -0.15
DNMT1-228ENST00000592705 PPP1R7Q15435 360 aa14.1□□□□□ -0.15
DNMT1-228ENST00000592705 C11orf57Q6ZUT1 292 aaPredicted RBP14.1□□□□□ -0.15
DNMT1-228ENST00000592705 FNBP4Q8N3X1 1017 aaPredicted RBP14.1□□□□□ -0.15
DNMT1-228ENST00000592705 SPHKAPQ2M3C7 1700 aa14.1□□□□□ -0.15
DNMT1-228ENST00000592705 ERVV-1B6SEH8 477 aa14.09□□□□□ -0.15
DNMT1-228ENST00000592705 STAMBPO95630 424 aa14.09□□□□□ -0.15
DNMT1-228ENST00000592705 ALAS1P13196 640 aa14.09□□□□□ -0.15
DNMT1-228ENST00000592705 SMTNP53814 917 aa14.09□□□□□ -0.15
DNMT1-228ENST00000592705 RGS22Q8NE09 1264 aa14.09□□□□□ -0.15
DNMT1-228ENST00000592705 CLIC6Q96NY7 704 aa14.09□□□□□ -0.15
DNMT1-228ENST00000592705 ATP6V0A2Q9Y487 856 aa14.09□□□□□ -0.15
DNMT1-228ENST00000592705 POTEDQ86YR6 584 aa14.09□□□□□ -0.15
DNMT1-228ENST00000592705 CDAN1Q8IWY9 1227 aa14.09□□□□□ -0.15
DNMT1-228ENST00000592705 DESI2Q9BSY9 194 aa14.09□□□□□ -0.15
DNMT1-228ENST00000592705 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.09□□□□□ -0.15
DNMT1-228ENST00000592705 hCG_1642624A0A1W2PR95 340 aa14.09□□□□□ -0.15
DNMT1-228ENST00000592705 BTBD18B2RXH4 712 aa14.09□□□□□ -0.15
DNMT1-228ENST00000592705 CALCRLQ16602 461 aa14.09□□□□□ -0.15
DNMT1-228ENST00000592705 CACTINQ8WUQ7 758 aaKnown RBP14.09□□□□□ -0.15
DNMT1-228ENST00000592705 IQCGQ9H095 443 aaKnown RBP14.09□□□□□ -0.15
DNMT1-228ENST00000592705 LAMC1P11047 1609 aa14.09□□□□□ -0.15
DNMT1-228ENST00000592705 ARHGAP31Q2M1Z3 1444 aa14.09□□□□□ -0.15
DNMT1-228ENST00000592705 TNS3Q68CZ2 1445 aa14.09□□□□□ -0.15
DNMT1-228ENST00000592705 PRR36Q9H6K5 1346 aa14.09□□□□□ -0.15
DNMT1-228ENST00000592705 CDC42BPBQ9Y5S2 1711 aa14.09□□□□□ -0.15
DNMT1-228ENST00000592705 SEMA3EO15041 775 aa14.09□□□□□ -0.15
DNMT1-228ENST00000592705 GTPBP6O43824 516 aaPredicted RBP14.09□□□□□ -0.15
DNMT1-228ENST00000592705 TNFAIP3P21580 790 aa14.09□□□□□ -0.15
DNMT1-228ENST00000592705 RESTQ13127 1097 aa14.09□□□□□ -0.15
DNMT1-228ENST00000592705 CCDC50Q8IVM0 306 aa14.09□□□□□ -0.15
DNMT1-228ENST00000592705 IFIH1Q9BYX4 1025 aaKnown RBP14.09□□□□□ -0.15
DNMT1-228ENST00000592705 ACTN4O43707 911 aaKnown RBP14.08□□□□□ -0.15
DNMT1-228ENST00000592705 EEF2P13639 858 aaKnown RBP14.08□□□□□ -0.15
DNMT1-228ENST00000592705 FBF1Q8TES7 1133 aa14.08□□□□□ -0.15
DNMT1-228ENST00000592705 SWAP70Q9UH65 585 aa14.08□□□□□ -0.15
DNMT1-228ENST00000592705 UTP11Q9Y3A2 253 aaKnown RBP14.08□□□□□ -0.15
DNMT1-228ENST00000592705 ICA1Q05084 483 aa14.08□□□□□ -0.16
DNMT1-228ENST00000592705 RSPH3Q86UC2 560 aa14.08□□□□□ -0.16
DNMT1-228ENST00000592705 TRIM58Q8NG06 486 aa14.08□□□□□ -0.16
DNMT1-228ENST00000592705 NARFQ9UHQ1 456 aa14.08□□□□□ -0.16
DNMT1-228ENST00000592705 MYO3BQ8WXR4 1341 aa14.08□□□□□ -0.16
DNMT1-228ENST00000592705 BTDP43251 543 aa14.08□□□□□ -0.16
DNMT1-228ENST00000592705 TFAP4Q01664 338 aa14.08□□□□□ -0.16
DNMT1-228ENST00000592705 SFMBT2Q5VUG0 894 aa14.08□□□□□ -0.16
DNMT1-228ENST00000592705 RUFY4Q6ZNE9 571 aa14.08□□□□□ -0.16
DNMT1-228ENST00000592705 LINC00301Q8NCQ3 95 aa14.08□□□□□ -0.16
DNMT1-228ENST00000592705 SSX2IPQ9Y2D8 614 aa14.08□□□□□ -0.16
DNMT1-228ENST00000592705 SMIM23A6NLE4 172 aa14.08□□□□□ -0.16
DNMT1-228ENST00000592705 ATP8B1O43520 1251 aa14.08□□□□□ -0.16
DNMT1-228ENST00000592705 DDAH1O94760 285 aa14.08□□□□□ -0.16
DNMT1-228ENST00000592705 ERCC5P28715 1186 aaPredicted RBP14.08□□□□□ -0.16
DNMT1-228ENST00000592705 ATP5DP30049 168 aa14.08□□□□□ -0.16
DNMT1-228ENST00000592705 BLIDQ8IZY5 108 aa14.08□□□□□ -0.16
DNMT1-228ENST00000592705 MSANTD4Q8NCY6 345 aa14.08□□□□□ -0.16
DNMT1-228ENST00000592705 FOXP1Q9H334 677 aaPredicted RBP14.08□□□□□ -0.16
DNMT1-228ENST00000592705 HAUS4Q9H6D7 363 aa14.08□□□□□ -0.16
DNMT1-228ENST00000592705 TNKSO95271 1327 aa14.08□□□□□ -0.16
DNMT1-228ENST00000592705 GRAPQ13588 217 aa14.08□□□□□ -0.16
DNMT1-228ENST00000592705 PPP1R14CQ8TAE6 165 aa14.08□□□□□ -0.16
DNMT1-228ENST00000592705 GRAPLQ8TC17 118 aaPredicted RBP14.08□□□□□ -0.16
DNMT1-228ENST00000592705 FAM193BQ96PV7 902 aaPredicted RBP14.08□□□□□ -0.16
DNMT1-228ENST00000592705 ATG3Q9NT62 314 aa14.08□□□□□ -0.16
DNMT1-228ENST00000592705 MED14O60244 1454 aa14.07□□□□□ -0.16
DNMT1-228ENST00000592705 DPCR1Q3MIW9 517 aa14.07□□□□□ -0.16
DNMT1-228ENST00000592705 CROCCP2Q86T23 111 aa14.07□□□□□ -0.16
DNMT1-228ENST00000592705 GNA14O95837 355 aa14.07□□□□□ -0.16
DNMT1-228ENST00000592705 PCP11498 1178 aaKnown RBP14.07□□□□□ -0.16
DNMT1-228ENST00000592705 CLUL1Q15846 466 aa14.07□□□□□ -0.16
DNMT1-228ENST00000592705 ZNF827Q17R98 1081 aa14.07□□□□□ -0.16
DNMT1-228ENST00000592705 USH1GQ495M9 461 aa14.07□□□□□ -0.16
DNMT1-228ENST00000592705 SND1Q7KZF4 910 aaKnown RBP eCLIP14.07□□□□□ -0.16
DNMT1-228ENST00000592705 DYMQ7RTS9 669 aa14.07□□□□□ -0.16
DNMT1-228ENST00000592705 MCF2L2Q86YR7 1114 aa14.07□□□□□ -0.16
DNMT1-228ENST00000592705 COA7Q96BR5 231 aa14.07□□□□□ -0.16
DNMT1-228ENST00000592705 PCDHA5Q9Y5H7 936 aa14.07□□□□□ -0.16
DNMT1-228ENST00000592705 GLI2P10070 1586 aa14.07□□□□□ -0.16
DNMT1-228ENST00000592705 HPDP32754 393 aaPredicted RBP14.07□□□□□ -0.16
DNMT1-228ENST00000592705 KLHL30Q0D2K2 578 aa14.07□□□□□ -0.16
DNMT1-228ENST00000592705 ABCB5Q2M3G0 1257 aa14.07□□□□□ -0.16
DNMT1-228ENST00000592705 HERC4Q5GLZ8 1057 aaPredicted RBP14.07□□□□□ -0.16
DNMT1-228ENST00000592705 RABGGTAQ92696 567 aa14.07□□□□□ -0.16
DNMT1-228ENST00000592705 CCDC17Q96LX7 622 aa14.07□□□□□ -0.16
DNMT1-228ENST00000592705 PHLPP2Q6ZVD8 1323 aa14.07□□□□□ -0.16
DNMT1-228ENST00000592705 M0R2C6 588 aa14.07□□□□□ -0.16
DNMT1-228ENST00000592705 HARSP12081 509 aaKnown RBP14.07□□□□□ -0.16
DNMT1-228ENST00000592705 GALNT17Q6IS24 598 aa14.07□□□□□ -0.16
DNMT1-228ENST00000592705 DPH6Q7L8W6 267 aa14.07□□□□□ -0.16
DNMT1-228ENST00000592705 CCDC25Q86WR0 208 aa14.07□□□□□ -0.16
DNMT1-228ENST00000592705 SYCE1Q8N0S2 351 aa14.07□□□□□ -0.16
DNMT1-228ENST00000592705 REXO1Q8N1G1 1221 aaKnown RBP14.07□□□□□ -0.16
DNMT1-228ENST00000592705 PPM1EQ8WY54 764 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms