RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 TEX13BQ9BXU2 312 aa12.09□□□□□ -0.47
VMP1-214ENST00000592106 SYNPO2Q9UMS6 1093 aa12.09□□□□□ -0.47
VMP1-214ENST00000592106 ADAMTS5Q9UNA0 930 aa12.09□□□□□ -0.47
VMP1-214ENST00000592106 DIS3Q9Y2L1 958 aaKnown RBP12.09□□□□□ -0.47
VMP1-214ENST00000592106 GREB1LQ9C091 1923 aaPredicted RBP12.09□□□□□ -0.47
VMP1-214ENST00000592106 STK25O00506 426 aa12.08□□□□□ -0.48
VMP1-214ENST00000592106 COBLO75128 1261 aa12.08□□□□□ -0.48
VMP1-214ENST00000592106 RARBP10826 455 aa12.08□□□□□ -0.48
VMP1-214ENST00000592106 ATN1P54259 1190 aaPredicted RBP12.08□□□□□ -0.48
VMP1-214ENST00000592106 RTP1P59025 263 aa12.08□□□□□ -0.48
VMP1-214ENST00000592106 GJC2Q5T442 439 aaPredicted RBP12.08□□□□□ -0.48
VMP1-214ENST00000592106 TSHZ3Q63HK5 1081 aa12.08□□□□□ -0.48
VMP1-214ENST00000592106 STK11IPQ8N1F8 1099 aa12.08□□□□□ -0.48
VMP1-214ENST00000592106 TRPV1Q8NER1 839 aa12.08□□□□□ -0.48
VMP1-214ENST00000592106 NAPBQ9H115 298 aa12.08□□□□□ -0.48
VMP1-214ENST00000592106 FBXO28Q9NVF7 368 aa12.08□□□□□ -0.48
VMP1-214ENST00000592106 CNPY2Q9Y2B0 182 aa12.08□□□□□ -0.48
VMP1-214ENST00000592106 TRIOBPQ9H2D6 2365 aa12.08□□□□□ -0.48
VMP1-214ENST00000592106 COL11A1P12107 1806 aaPredicted RBP12.07□□□□□ -0.48
VMP1-214ENST00000592106 PATL2C9JE40 543 aaKnown RBP12.07□□□□□ -0.48
VMP1-214ENST00000592106 F5H6K3 240 aa12.07□□□□□ -0.48
VMP1-214ENST00000592106 SMIM22K7EJ46 135 aa12.07□□□□□ -0.48
VMP1-214ENST00000592106 SOX1O00570 391 aaPredicted RBP12.07□□□□□ -0.48
VMP1-214ENST00000592106 ZBED4O75132 1171 aa12.07□□□□□ -0.48
VMP1-214ENST00000592106 TTLL1O95922 423 aa12.07□□□□□ -0.48
VMP1-214ENST00000592106 NDUFB10O96000 172 aa12.07□□□□□ -0.48
VMP1-214ENST00000592106 IGHA2P01877 340 aa12.07□□□□□ -0.48
VMP1-214ENST00000592106 TSPY3P0CV98 308 aa12.07□□□□□ -0.48
VMP1-214ENST00000592106 TSPY8P0CW00 308 aa12.07□□□□□ -0.48
VMP1-214ENST00000592106 KLRC3Q07444 240 aa12.07□□□□□ -0.48
VMP1-214ENST00000592106 SNRNP48Q6IEG0 339 aaKnown RBP12.07□□□□□ -0.48
VMP1-214ENST00000592106 RNF180Q86T96 592 aa12.07□□□□□ -0.48
VMP1-214ENST00000592106 IFNL3Q8IZI9 196 aa12.07□□□□□ -0.48
VMP1-214ENST00000592106 MSL3Q8N5Y2 521 aaKnown RBP12.07□□□□□ -0.48
VMP1-214ENST00000592106 PRPF38AQ8NAV1 312 aaKnown RBP12.07□□□□□ -0.48
VMP1-214ENST00000592106 LRCH3Q96II8 777 aa12.07□□□□□ -0.48
VMP1-214ENST00000592106 EPB41L4AQ9HCS5 686 aaPredicted RBP12.07□□□□□ -0.48
VMP1-214ENST00000592106 CLIP2Q9UDT6 1046 aa12.07□□□□□ -0.48
VMP1-214ENST00000592106 ZNF214Q9UL59 606 aaPredicted RBP12.07□□□□□ -0.48
VMP1-214ENST00000592106 ISY1Q9ULR0 285 aaKnown RBP12.07□□□□□ -0.48
VMP1-214ENST00000592106 ATP11BQ9Y2G3 1177 aa12.07□□□□□ -0.48
VMP1-214ENST00000592106 PLIN4Q96Q06 1357 aa12.06□□□□□ -0.48
VMP1-214ENST00000592106 M0R2C6 588 aa12.06□□□□□ -0.48
VMP1-214ENST00000592106 DLL1O00548 723 aa12.06□□□□□ -0.48
VMP1-214ENST00000592106 FDX1P10109 184 aa12.06□□□□□ -0.48
VMP1-214ENST00000592106 AKR1A1P14550 325 aa12.06□□□□□ -0.48
VMP1-214ENST00000592106 MX1P20591 662 aa12.06□□□□□ -0.48
VMP1-214ENST00000592106 MDM2Q00987 491 aaPredicted RBP12.06□□□□□ -0.48
VMP1-214ENST00000592106 FAM47AQ5JRC9 791 aa12.06□□□□□ -0.48
VMP1-214ENST00000592106 ANO1Q5XXA6 986 aa12.06□□□□□ -0.48
VMP1-214ENST00000592106 DDX11Q96FC9 970 aa12.06□□□□□ -0.48
VMP1-214ENST00000592106 TINF2Q9BSI4 451 aa12.06□□□□□ -0.48
VMP1-214ENST00000592106 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.06□□□□□ -0.48
VMP1-214ENST00000592106 XPNPEP3Q9NQH7 507 aa12.06□□□□□ -0.48
VMP1-214ENST00000592106 FBXO40Q9UH90 709 aa12.06□□□□□ -0.48
VMP1-214ENST00000592106 FEM1BQ9UK73 627 aa12.06□□□□□ -0.48
VMP1-214ENST00000592106 CEP290O15078 2479 aa12.05□□□□□ -0.48
VMP1-214ENST00000592106 MYH4Q9Y623 1939 aa12.05□□□□□ -0.48
VMP1-214ENST00000592106 PGK2P07205 417 aa12.05□□□□□ -0.48
VMP1-214ENST00000592106 RRP1P56182 461 aaKnown RBP12.05□□□□□ -0.48
VMP1-214ENST00000592106 LRRC41Q15345 812 aa12.05□□□□□ -0.48
VMP1-214ENST00000592106 ZNF792Q3KQV3 632 aa12.05□□□□□ -0.48
VMP1-214ENST00000592106 PRAMEF19Q5SWL8 479 aa12.05□□□□□ -0.48
VMP1-214ENST00000592106 SLC39A5Q6ZMH5 540 aa12.05□□□□□ -0.48
VMP1-214ENST00000592106 HS6ST3Q8IZP7 471 aa12.05□□□□□ -0.48
VMP1-214ENST00000592106 GMCL1P1Q8NEA9 526 aa12.05□□□□□ -0.48
VMP1-214ENST00000592106 REPS2Q8NFH8 660 aa12.05□□□□□ -0.48
VMP1-214ENST00000592106 PI4K2BQ8TCG2 481 aa12.05□□□□□ -0.48
VMP1-214ENST00000592106 KIFC2Q96AC6 838 aa12.05□□□□□ -0.48
VMP1-214ENST00000592106 CEP95Q96GE4 821 aa12.05□□□□□ -0.48
VMP1-214ENST00000592106 NUP88Q99567 741 aaPredicted RBP12.05□□□□□ -0.48
VMP1-214ENST00000592106 PRDM5Q9NQX1 630 aaPredicted RBP12.05□□□□□ -0.48
VMP1-214ENST00000592106 MTMR4Q9NYA4 1195 aa12.05□□□□□ -0.48
VMP1-214ENST00000592106 SYNGAP1Q96PV0 1343 aa12.05□□□□□ -0.48
VMP1-214ENST00000592106 PLXNA1Q9UIW2 1896 aa12.04□□□□□ -0.48
VMP1-214ENST00000592106 IGKV6D-41A0A0C4DH26 115 aa12.04□□□□□ -0.48
VMP1-214ENST00000592106 ATP2A1O14983 1001 aa12.04□□□□□ -0.48
VMP1-214ENST00000592106 PRDM1O75626 825 aa12.04□□□□□ -0.48
VMP1-214ENST00000592106 ADCYAP1R1P41586 468 aa12.04□□□□□ -0.48
VMP1-214ENST00000592106 OAZ1P54368 228 aa12.04□□□□□ -0.48
VMP1-214ENST00000592106 PPARAQ07869 468 aa12.04□□□□□ -0.48
VMP1-214ENST00000592106 IKQ13123 557 aaPredicted RBP12.04□□□□□ -0.48
VMP1-214ENST00000592106 ZMYM1Q5SVZ6 1142 aa12.04□□□□□ -0.48
VMP1-214ENST00000592106 IER5LQ5T953 404 aa12.04□□□□□ -0.48
VMP1-214ENST00000592106 FAM160B2Q86V87 743 aa12.04□□□□□ -0.48
VMP1-214ENST00000592106 CPXCR1Q8N123 301 aa12.04□□□□□ -0.48
VMP1-214ENST00000592106 LRRC47Q8N1G4 583 aaKnown RBP12.04□□□□□ -0.48
VMP1-214ENST00000592106 CHST13Q8NET6 341 aa12.04□□□□□ -0.48
VMP1-214ENST00000592106 NEDD1Q8NHV4 660 aa12.04□□□□□ -0.48
VMP1-214ENST00000592106 SLC39A7Q92504 469 aa12.04□□□□□ -0.48
VMP1-214ENST00000592106 MKL1Q969V6 931 aa12.04□□□□□ -0.48
VMP1-214ENST00000592106 STK24Q9Y6E0 443 aa12.04□□□□□ -0.48
VMP1-214ENST00000592106 ZNFX1Q9P2E3 1918 aaKnown RBP12.03□□□□□ -0.48
VMP1-214ENST00000592106 TSPY2A6NKD2 308 aa12.03□□□□□ -0.48
VMP1-214ENST00000592106 BMP3P12645 472 aa12.03□□□□□ -0.48
VMP1-214ENST00000592106 SLC4A3P48751 1232 aa12.03□□□□□ -0.48
VMP1-214ENST00000592106 STAT2P52630 851 aa12.03□□□□□ -0.48
VMP1-214ENST00000592106 SNX17Q15036 470 aa12.03□□□□□ -0.48
VMP1-214ENST00000592106 TRIM60Q495X7 471 aa12.03□□□□□ -0.48
VMP1-214ENST00000592106 C1orf53Q5VUE5 145 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms