RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 TCF20Q9UGU0 1960 aaKnown RBP18.22■□□□□ 0.51
SF3A2-204ENST00000589118 TTF1Q15361 905 aaPredicted RBP18.21■□□□□ 0.51
SF3A2-204ENST00000589118 C12orf60Q5U649 245 aa18.21■□□□□ 0.51
SF3A2-204ENST00000589118 ZNF365Q70YC5 407 aa18.21■□□□□ 0.51
SF3A2-204ENST00000589118 FTSJ3Q8IY81 847 aaKnown RBP18.21■□□□□ 0.51
SF3A2-204ENST00000589118 VTI1AQ96AJ9 217 aa18.21■□□□□ 0.51
SF3A2-204ENST00000589118 NRBP1Q9UHY1 535 aa18.21■□□□□ 0.51
SF3A2-204ENST00000589118 PPP1R9AQ9ULJ8 1098 aa18.21■□□□□ 0.51
SF3A2-204ENST00000589118 CNPY2Q9Y2B0 182 aa18.21■□□□□ 0.51
SF3A2-204ENST00000589118 MUC3AQ02505 3323 aa18.21■□□□□ 0.51
SF3A2-204ENST00000589118 PTGS1P23219 599 aa18.2■□□□□ 0.5
SF3A2-204ENST00000589118 MFSD5Q6N075 450 aa18.2■□□□□ 0.5
SF3A2-204ENST00000589118 TOX2Q96NM4 488 aa18.2■□□□□ 0.5
SF3A2-204ENST00000589118 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.2■□□□□ 0.5
SF3A2-204ENST00000589118 FAM184BQ9ULE4 1060 aa18.2■□□□□ 0.5
SF3A2-204ENST00000589118 DIS3Q9Y2L1 958 aaKnown RBP18.2■□□□□ 0.5
SF3A2-204ENST00000589118 CCER2I3L3R5 266 aa18.19■□□□□ 0.5
SF3A2-204ENST00000589118 ASGR1P07306 291 aa18.19■□□□□ 0.5
SF3A2-204ENST00000589118 C6orf222P0C671 652 aaPredicted RBP18.19■□□□□ 0.5
SF3A2-204ENST00000589118 IGFBP4P22692 258 aa18.19■□□□□ 0.5
SF3A2-204ENST00000589118 CYP2C18P33260 490 aa18.19■□□□□ 0.5
SF3A2-204ENST00000589118 CDK7P50613 346 aa18.19■□□□□ 0.5
SF3A2-204ENST00000589118 CPXCR1Q8N123 301 aa18.19■□□□□ 0.5
SF3A2-204ENST00000589118 PANK1Q8TE04 598 aa18.19■□□□□ 0.5
SF3A2-204ENST00000589118 TSEN34Q9BSV6 310 aaKnown RBP18.19■□□□□ 0.5
SF3A2-204ENST00000589118 BOLA2Q9H3K6 86 aa18.19■□□□□ 0.5
SF3A2-204ENST00000589118 SH2D4AQ9H788 454 aa18.19■□□□□ 0.5
SF3A2-204ENST00000589118 CXXC1Q9P0U4 656 aaPredicted RBP18.19■□□□□ 0.5
SF3A2-204ENST00000589118 ADD2P35612 726 aa18.18■□□□□ 0.5
SF3A2-204ENST00000589118 RASIP1Q5U651 963 aa18.18■□□□□ 0.5
SF3A2-204ENST00000589118 SNRNP48Q6IEG0 339 aaKnown RBP18.18■□□□□ 0.5
SF3A2-204ENST00000589118 C16orf86Q6ZW13 317 aa18.18■□□□□ 0.5
SF3A2-204ENST00000589118 ERC1Q8IUD2 1116 aa18.18■□□□□ 0.5
SF3A2-204ENST00000589118 NUP133Q8WUM0 1156 aa18.18■□□□□ 0.5
SF3A2-204ENST00000589118 DDX11Q96FC9 970 aa18.18■□□□□ 0.5
SF3A2-204ENST00000589118 NECAB3Q96P71 396 aaPredicted RBP18.18■□□□□ 0.5
SF3A2-204ENST00000589118 GAS2L1Q99501 681 aaPredicted RBP18.18■□□□□ 0.5
SF3A2-204ENST00000589118 NKX2-4Q9H2Z4 354 aa18.18■□□□□ 0.5
SF3A2-204ENST00000589118 DDX49Q9Y6V7 483 aaKnown RBP18.18■□□□□ 0.5
SF3A2-204ENST00000589118 UMODL1Q5DID0 1318 aa18.18■□□□□ 0.5
SF3A2-204ENST00000589118 BEX3Q00994 111 aa18.17■□□□□ 0.5
SF3A2-204ENST00000589118 CTR9Q6PD62 1173 aa18.17■□□□□ 0.5
SF3A2-204ENST00000589118 ADAMTS19Q8TE59 1207 aa18.17■□□□□ 0.5
SF3A2-204ENST00000589118 CHMP4CQ96CF2 233 aa18.17■□□□□ 0.5
SF3A2-204ENST00000589118 CCDC17Q96LX7 622 aa18.17■□□□□ 0.5
SF3A2-204ENST00000589118 FGD4Q96M96 766 aa18.17■□□□□ 0.5
SF3A2-204ENST00000589118 ASB2Q96Q27 587 aa18.17■□□□□ 0.5
SF3A2-204ENST00000589118 KANSL2Q9H9L4 492 aa18.17■□□□□ 0.5
SF3A2-204ENST00000589118 RAVER2Q9HCJ3 691 aaKnown RBP18.17■□□□□ 0.5
SF3A2-204ENST00000589118 ATP8A2Q9NTI2 1148 aa18.17■□□□□ 0.5
SF3A2-204ENST00000589118 SLC4A4Q9Y6R1 1079 aa18.17■□□□□ 0.5
SF3A2-204ENST00000589118 MYH7P12883 1935 aa18.17■□□□□ 0.5
SF3A2-204ENST00000589118 ROBO3Q96MS0 1386 aa18.17■□□□□ 0.5
SF3A2-204ENST00000589118 GREB1LQ9C091 1923 aaPredicted RBP18.16■□□□□ 0.5
SF3A2-204ENST00000589118 DNAJC25-GNG10A0A024R161 153 aa18.16■□□□□ 0.5
SF3A2-204ENST00000589118 MOXD2PA6NHM9 499 aa18.16■□□□□ 0.5
SF3A2-204ENST00000589118 PPIGQ13427 754 aaKnown RBP eCLIP18.16■□□□□ 0.52e-10■□□□□ 9.3
SF3A2-204ENST00000589118 ACVR2BQ13705 512 aa18.16■□□□□ 0.5
SF3A2-204ENST00000589118 CCDC144BQ3MJ40 725 aa18.16■□□□□ 0.5
SF3A2-204ENST00000589118 TMED8Q6PL24 325 aaPredicted RBP18.16■□□□□ 0.5
SF3A2-204ENST00000589118 GLT1D1Q96MS3 346 aa18.16■□□□□ 0.5
SF3A2-204ENST00000589118 GOPCQ9HD26 462 aa18.16■□□□□ 0.5
SF3A2-204ENST00000589118 PAG1Q9NWQ8 432 aa18.16■□□□□ 0.5
SF3A2-204ENST00000589118 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.16■□□□□ 0.5
SF3A2-204ENST00000589118 YBX2Q9Y2T7 364 aaKnown RBP18.16■□□□□ 0.5
SF3A2-204ENST00000589118 MYH4Q9Y623 1939 aa18.15■□□□□ 0.5
SF3A2-204ENST00000589118 CHD9Q3L8U1 2897 aa18.15■□□□□ 0.5
SF3A2-204ENST00000589118 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.15■□□□□ 0.5
SF3A2-204ENST00000589118 ARVCFO00192 962 aa18.15■□□□□ 0.5
SF3A2-204ENST00000589118 CTAGE5O15320 804 aa18.15■□□□□ 0.5
SF3A2-204ENST00000589118 DUSP11O75319 330 aaKnown RBP18.15■□□□□ 0.5
SF3A2-204ENST00000589118 IFIT2P09913 472 aaKnown RBP18.15■□□□□ 0.5
SF3A2-204ENST00000589118 RABGGTBP53611 331 aa18.15■□□□□ 0.5
SF3A2-204ENST00000589118 MAMDC4Q6UXC1 1216 aa18.15■□□□□ 0.5
SF3A2-204ENST00000589118 FAM126BQ8IXS8 530 aa18.15■□□□□ 0.5
SF3A2-204ENST00000589118 SLF1Q9BQI6 1058 aa18.15■□□□□ 0.5
SF3A2-204ENST00000589118 PUS7LQ9H0K6 701 aaKnown RBP18.15■□□□□ 0.5
SF3A2-204ENST00000589118 THEGQ9P2T0 379 aa18.15■□□□□ 0.5
SF3A2-204ENST00000589118 F5H6K3 240 aa18.14■□□□□ 0.49
SF3A2-204ENST00000589118 MYOGP15173 224 aa18.14■□□□□ 0.49
SF3A2-204ENST00000589118 KLRC3Q07444 240 aa18.14■□□□□ 0.49
SF3A2-204ENST00000589118 GNASQ5JWF2 1037 aa18.14■□□□□ 0.49
SF3A2-204ENST00000589118 TMEM63BQ5T3F8 832 aa18.14■□□□□ 0.49
SF3A2-204ENST00000589118 OTOP2Q7RTS6 562 aa18.14■□□□□ 0.49
SF3A2-204ENST00000589118 CLASRPQ8N2M8 674 aaKnown RBP18.14■□□□□ 0.49
SF3A2-204ENST00000589118 TMEM199Q8N511 208 aa18.14■□□□□ 0.49
SF3A2-204ENST00000589118 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.14■□□□□ 0.49
SF3A2-204ENST00000589118 KIFC2Q96AC6 838 aa18.14■□□□□ 0.49
SF3A2-204ENST00000589118 TEX13BQ9BXU2 312 aa18.14■□□□□ 0.49
SF3A2-204ENST00000589118 SYNGAP1Q96PV0 1343 aa18.14■□□□□ 0.49
SF3A2-204ENST00000589118 NDUFB10O96000 172 aa18.13■□□□□ 0.49
SF3A2-204ENST00000589118 CCL23P55773 120 aa18.13■□□□□ 0.49
SF3A2-204ENST00000589118 CNTN2Q02246 1040 aa18.13■□□□□ 0.49
SF3A2-204ENST00000589118 SIRT2Q8IXJ6 389 aa18.13■□□□□ 0.49
SF3A2-204ENST00000589118 MICALL1Q8N3F8 863 aa18.13■□□□□ 0.49
SF3A2-204ENST00000589118 ATXN2LQ8WWM7 1075 aaKnown RBP18.13■□□□□ 0.49
SF3A2-204ENST00000589118 UHRF1Q96T88 793 aaPredicted RBP18.13■□□□□ 0.49
SF3A2-204ENST00000589118 ASTN1O14525 1302 aa18.13■□□□□ 0.49
SF3A2-204ENST00000589118 ELP1O95163 1332 aa18.13■□□□□ 0.49
SF3A2-204ENST00000589118 A0A0U1RQG5 324 aaPredicted RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms