RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 MAMDC4Q6UXC1 1216 aa16.6■□□□□ 0.25
CLPTM1-208ENST00000588274 RNF180Q86T96 592 aa16.6■□□□□ 0.25
CLPTM1-208ENST00000588274 TBX21Q9UL17 535 aa16.6■□□□□ 0.25
CLPTM1-208ENST00000588274 SLC4A4Q9Y6R1 1079 aa16.6■□□□□ 0.25
CLPTM1-208ENST00000588274 SYNGAP1Q96PV0 1343 aa16.6■□□□□ 0.25
CLPTM1-208ENST00000588274 PQBP1O60828 265 aaKnown RBP16.59■□□□□ 0.25
CLPTM1-208ENST00000588274 NDUFB10O96000 172 aa16.59■□□□□ 0.25
CLPTM1-208ENST00000588274 CST5P28325 142 aaPredicted RBP16.59■□□□□ 0.25
CLPTM1-208ENST00000588274 MSL3Q8N5Y2 521 aaKnown RBP16.59■□□□□ 0.25
CLPTM1-208ENST00000588274 USP38Q8NB14 1042 aa16.59■□□□□ 0.25
CLPTM1-208ENST00000588274 RNPC3Q96LT9 517 aaKnown RBP16.59■□□□□ 0.25
CLPTM1-208ENST00000588274 TOX2Q96NM4 488 aa16.59■□□□□ 0.25
CLPTM1-208ENST00000588274 TSEN34Q9BSV6 310 aaKnown RBP16.59■□□□□ 0.25
CLPTM1-208ENST00000588274 TEX13BQ9BXU2 312 aa16.59■□□□□ 0.25
CLPTM1-208ENST00000588274 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.59■□□□□ 0.25
CLPTM1-208ENST00000588274 EPB41L4AQ9HCS5 686 aaPredicted RBP16.59■□□□□ 0.25
CLPTM1-208ENST00000588274 GOPCQ9HD26 462 aa16.59■□□□□ 0.25
CLPTM1-208ENST00000588274 ARPP21Q9UBL0 812 aaPredicted RBP16.59■□□□□ 0.25
CLPTM1-208ENST00000588274 COG6Q9Y2V7 657 aa16.59■□□□□ 0.25
CLPTM1-208ENST00000588274 REV3LO60673 3130 aa16.59■□□□□ 0.25
CLPTM1-208ENST00000588274 GSG1L2A8MUP6 293 aa16.58■□□□□ 0.24
CLPTM1-208ENST00000588274 ATP2A1O14983 1001 aa16.58■□□□□ 0.24
CLPTM1-208ENST00000588274 COPB2P35606 906 aa16.58■□□□□ 0.24
CLPTM1-208ENST00000588274 SBK1Q52WX2 424 aa16.58■□□□□ 0.24
CLPTM1-208ENST00000588274 RASIP1Q5U651 963 aa16.58■□□□□ 0.24
CLPTM1-208ENST00000588274 STRBPQ96SI9 672 aaKnown RBP16.58■□□□□ 0.24
CLPTM1-208ENST00000588274 SLF1Q9BQI6 1058 aa16.58■□□□□ 0.24
CLPTM1-208ENST00000588274 KATNBL1Q9H079 304 aa16.58■□□□□ 0.24
CLPTM1-208ENST00000588274 MCM3APO60318 1980 aa16.57■□□□□ 0.24
CLPTM1-208ENST00000588274 CTAGE5O15320 804 aa16.57■□□□□ 0.24
CLPTM1-208ENST00000588274 HMMRO75330 724 aa16.57■□□□□ 0.24
CLPTM1-208ENST00000588274 FOSL2P15408 326 aa16.57■□□□□ 0.24
CLPTM1-208ENST00000588274 CDK7P50613 346 aa16.57■□□□□ 0.24
CLPTM1-208ENST00000588274 FPGSQ05932 587 aa16.57■□□□□ 0.24
CLPTM1-208ENST00000588274 GRIN2CQ14957 1233 aa16.57■□□□□ 0.24
CLPTM1-208ENST00000588274 SNRNP48Q6IEG0 339 aaKnown RBP16.57■□□□□ 0.24
CLPTM1-208ENST00000588274 C16orf59Q7L2K0 433 aa16.57■□□□□ 0.24
CLPTM1-208ENST00000588274 ZNF467Q7Z7K2 595 aaPredicted RBP16.57■□□□□ 0.24
CLPTM1-208ENST00000588274 NYAP2Q9P242 653 aa16.57■□□□□ 0.24
CLPTM1-208ENST00000588274 DDX19BQ9UMR2 479 aa16.57■□□□□ 0.24
CLPTM1-208ENST00000588274 XIRP2A4UGR9 3374 aa16.56■□□□□ 0.24
CLPTM1-208ENST00000588274 PLIN4Q96Q06 1357 aa16.56■□□□□ 0.24
CLPTM1-208ENST00000588274 MOXD2PA6NHM9 499 aa16.56■□□□□ 0.24
CLPTM1-208ENST00000588274 F5H6K3 240 aa16.56■□□□□ 0.24
CLPTM1-208ENST00000588274 RAG1P15918 1043 aa16.56■□□□□ 0.24
CLPTM1-208ENST00000588274 DNAJB2P25686 324 aa16.56■□□□□ 0.24
CLPTM1-208ENST00000588274 KLRC3Q07444 240 aa16.56■□□□□ 0.24
CLPTM1-208ENST00000588274 KCNA10Q16322 511 aa16.56■□□□□ 0.24
CLPTM1-208ENST00000588274 OSBP2Q969R2 916 aa16.56■□□□□ 0.24
CLPTM1-208ENST00000588274 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.56■□□□□ 0.24
CLPTM1-208ENST00000588274 UPF3AQ9H1J1 476 aaKnown RBP16.56■□□□□ 0.24
CLPTM1-208ENST00000588274 STARD7Q9NQZ5 370 aa16.56■□□□□ 0.24
CLPTM1-208ENST00000588274 CNPY2Q9Y2B0 182 aa16.56■□□□□ 0.24
CLPTM1-208ENST00000588274 MYH4Q9Y623 1939 aa16.56■□□□□ 0.24
CLPTM1-208ENST00000588274 NKX3-2P78367 333 aa16.55■□□□□ 0.24
CLPTM1-208ENST00000588274 MIER1Q8N108 512 aa16.55■□□□□ 0.24
CLPTM1-208ENST00000588274 SLC38A10Q9HBR0 1119 aa16.55■□□□□ 0.24
CLPTM1-208ENST00000588274 TMEM39AQ9NV64 488 aa16.55■□□□□ 0.24
CLPTM1-208ENST00000588274 ASTN1O14525 1302 aa16.54■□□□□ 0.24
CLPTM1-208ENST00000588274 SMARCA5O60264 1052 aaPredicted RBP16.54■□□□□ 0.24
CLPTM1-208ENST00000588274 DUSP11O75319 330 aaKnown RBP16.54■□□□□ 0.24
CLPTM1-208ENST00000588274 TIMP1P01033 207 aa16.54■□□□□ 0.24
CLPTM1-208ENST00000588274 GIMAP6Q6P9H5 292 aa16.54■□□□□ 0.24
CLPTM1-208ENST00000588274 AMOTL1Q8IY63 956 aa16.54■□□□□ 0.24
CLPTM1-208ENST00000588274 PRPF38AQ8NAV1 312 aaKnown RBP16.54■□□□□ 0.24
CLPTM1-208ENST00000588274 BCL11AQ9H165 835 aa16.54■□□□□ 0.24
CLPTM1-208ENST00000588274 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.54■□□□□ 0.24
CLPTM1-208ENST00000588274 ZHX1Q9UKY1 873 aaPredicted RBP16.54■□□□□ 0.24
CLPTM1-208ENST00000588274 FAM184BQ9ULE4 1060 aa16.54■□□□□ 0.24
CLPTM1-208ENST00000588274 LCTP09848 1927 aa16.54■□□□□ 0.24
CLPTM1-208ENST00000588274 ELP1O95163 1332 aa16.53■□□□□ 0.24
CLPTM1-208ENST00000588274 GJA9P57773 515 aa16.53■□□□□ 0.24
CLPTM1-208ENST00000588274 ACVR2BQ13705 512 aa16.53■□□□□ 0.24
CLPTM1-208ENST00000588274 MFSD5Q6N075 450 aa16.53■□□□□ 0.24
CLPTM1-208ENST00000588274 FAM126BQ8IXS8 530 aa16.53■□□□□ 0.24
CLPTM1-208ENST00000588274 NUP133Q8WUM0 1156 aa16.53■□□□□ 0.24
CLPTM1-208ENST00000588274 MKL1Q969V6 931 aa16.53■□□□□ 0.24
CLPTM1-208ENST00000588274 RAVER2Q9HCJ3 691 aaKnown RBP16.53■□□□□ 0.24
CLPTM1-208ENST00000588274 ZNF536O15090 1300 aa16.52■□□□□ 0.24
CLPTM1-208ENST00000588274 RAD21O60216 631 aa16.52■□□□□ 0.24
CLPTM1-208ENST00000588274 ASGR1P07306 291 aa16.52■□□□□ 0.24
CLPTM1-208ENST00000588274 MS4A1P11836 297 aa16.52■□□□□ 0.24
CLPTM1-208ENST00000588274 PBX2P40425 430 aa16.52■□□□□ 0.24
CLPTM1-208ENST00000588274 CCDC144BQ3MJ40 725 aa16.52■□□□□ 0.24
CLPTM1-208ENST00000588274 TMEM240Q5SV17 173 aa16.52■□□□□ 0.24
CLPTM1-208ENST00000588274 C20orf194Q5TEA3 1177 aa16.52■□□□□ 0.24
CLPTM1-208ENST00000588274 TSHZ3Q63HK5 1081 aa16.52■□□□□ 0.24
CLPTM1-208ENST00000588274 ZSCAN25Q6NSZ9 544 aa16.52■□□□□ 0.24
CLPTM1-208ENST00000588274 ARMCX2Q7L311 632 aa16.52■□□□□ 0.24
CLPTM1-208ENST00000588274 KBTBD3Q8NAB2 608 aa16.52■□□□□ 0.24
CLPTM1-208ENST00000588274 GMCL1P1Q8NEA9 526 aa16.52■□□□□ 0.24
CLPTM1-208ENST00000588274 APPBP2Q92624 585 aa16.52■□□□□ 0.24
CLPTM1-208ENST00000588274 CEP95Q96GE4 821 aa16.52■□□□□ 0.24
CLPTM1-208ENST00000588274 DDRGK1Q96HY6 314 aa16.52■□□□□ 0.24
CLPTM1-208ENST00000588274 LRRCC1Q9C099 1032 aa16.52■□□□□ 0.24
CLPTM1-208ENST00000588274 ECHDC1Q9NTX5 307 aa16.52■□□□□ 0.24
CLPTM1-208ENST00000588274 MTMR4Q9NYA4 1195 aa16.52■□□□□ 0.24
CLPTM1-208ENST00000588274 SYNPO2Q9UMS6 1093 aa16.52■□□□□ 0.24
CLPTM1-208ENST00000588274 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.51■□□□□ 0.23
CLPTM1-208ENST00000588274 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms