RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 GMCL1P1Q8NEA9 526 aa22.34■■□□□ 1.17
TRIM47-205ENST00000587774 NEDD1Q8NHV4 660 aa22.34■■□□□ 1.17
TRIM47-205ENST00000587774 SYNPO2Q9UMS6 1093 aa22.34■■□□□ 1.17
TRIM47-205ENST00000587774 RIPK3Q9Y572 518 aa22.34■■□□□ 1.17
TRIM47-205ENST00000587774 PDE1AP54750 535 aa22.33■■□□□ 1.17
TRIM47-205ENST00000587774 ARRDC4Q8NCT1 418 aa22.33■■□□□ 1.17
TRIM47-205ENST00000587774 KIFC2Q96AC6 838 aa22.33■■□□□ 1.17
TRIM47-205ENST00000587774 EVI5LQ96CN4 794 aa22.33■■□□□ 1.17
TRIM47-205ENST00000587774 LRCH3Q96II8 777 aa22.33■■□□□ 1.17
TRIM47-205ENST00000587774 TINF2Q9BSI4 451 aa22.33■■□□□ 1.17
TRIM47-205ENST00000587774 DIS3Q9Y2L1 958 aaKnown RBP22.33■■□□□ 1.17
TRIM47-205ENST00000587774 KBTBD13C9JR72 458 aa22.32■■□□□ 1.16
TRIM47-205ENST00000587774 TFAP4Q01664 338 aa22.32■■□□□ 1.16
TRIM47-205ENST00000587774 VPS53Q5VIR6 699 aa22.32■■□□□ 1.16
TRIM47-205ENST00000587774 CPXCR1Q8N123 301 aa22.32■■□□□ 1.16
TRIM47-205ENST00000587774 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.32■■□□□ 1.16
TRIM47-205ENST00000587774 ATP2A1O14983 1001 aa22.31■■□□□ 1.16
TRIM47-205ENST00000587774 MYCNP04198 464 aaPredicted RBP22.31■■□□□ 1.16
TRIM47-205ENST00000587774 CTDSPL2Q05D32 466 aa22.31■■□□□ 1.16
TRIM47-205ENST00000587774 TDHQ8IZJ6 230 aa22.31■■□□□ 1.16
TRIM47-205ENST00000587774 SLC38A10Q9HBR0 1119 aa22.31■■□□□ 1.16
TRIM47-205ENST00000587774 NRBP1Q9UHY1 535 aa22.31■■□□□ 1.16
TRIM47-205ENST00000587774 FEM1BQ9UK73 627 aa22.31■■□□□ 1.16
TRIM47-205ENST00000587774 TAL1P17542 331 aaPredicted RBP22.3■■□□□ 1.16
TRIM47-205ENST00000587774 SLC4A3P48751 1232 aa22.3■■□□□ 1.16
TRIM47-205ENST00000587774 RTP1P59025 263 aa22.3■■□□□ 1.16
TRIM47-205ENST00000587774 MDM2Q00987 491 aaPredicted RBP22.3■■□□□ 1.16
TRIM47-205ENST00000587774 SLFN13Q68D06 897 aa22.3■■□□□ 1.16
TRIM47-205ENST00000587774 UBE2OQ9C0C9 1292 aaKnown RBP22.3■■□□□ 1.16
TRIM47-205ENST00000587774 RAVER2Q9HCJ3 691 aaKnown RBP22.3■■□□□ 1.16
TRIM47-205ENST00000587774 DNAJC25-GNG10A0A024R161 153 aa22.29■■□□□ 1.16
TRIM47-205ENST00000587774 A0A0D9SFI3 127 aa22.29■■□□□ 1.16
TRIM47-205ENST00000587774 ZBED4O75132 1171 aa22.29■■□□□ 1.16
TRIM47-205ENST00000587774 BMP3P12645 472 aa22.29■■□□□ 1.16
TRIM47-205ENST00000587774 LRRC41Q15345 812 aa22.29■■□□□ 1.16
TRIM47-205ENST00000587774 FAM227BQ96M60 508 aa22.29■■□□□ 1.16
TRIM47-205ENST00000587774 LNPKQ9C0E8 428 aa22.29■■□□□ 1.16
TRIM47-205ENST00000587774 INCENPQ9NQS7 918 aa22.29■■□□□ 1.16
TRIM47-205ENST00000587774 CTDP1Q9Y5B0 961 aaPredicted RBP22.29■■□□□ 1.16
TRIM47-205ENST00000587774 TSPY2A6NKD2 308 aa22.28■■□□□ 1.16
TRIM47-205ENST00000587774 ZNF865P0CJ78 1059 aaPredicted RBP22.28■■□□□ 1.16
TRIM47-205ENST00000587774 RARBP10826 455 aa22.28■■□□□ 1.16
TRIM47-205ENST00000587774 LENG1Q96BZ8 264 aaPredicted RBP22.28■■□□□ 1.16
TRIM47-205ENST00000587774 DDX11Q96FC9 970 aa22.28■■□□□ 1.16
TRIM47-205ENST00000587774 XPNPEP3Q9NQH7 507 aa22.28■■□□□ 1.16
TRIM47-205ENST00000587774 HELLSQ9NRZ9 838 aa22.28■■□□□ 1.16
TRIM47-205ENST00000587774 ANAPC4Q9UJX5 808 aa22.28■■□□□ 1.16
TRIM47-205ENST00000587774 ISY1Q9ULR0 285 aaKnown RBP22.28■■□□□ 1.16
TRIM47-205ENST00000587774 STX8Q9UNK0 236 aa22.28■■□□□ 1.16
TRIM47-205ENST00000587774 ATP11BQ9Y2G3 1177 aa22.28■■□□□ 1.16
TRIM47-205ENST00000587774 TACC3Q9Y6A5 838 aa22.28■■□□□ 1.16
TRIM47-205ENST00000587774 CDH23Q9H251 3354 aa22.28■■□□□ 1.16
TRIM47-205ENST00000587774 EYSQ5T1H1 3165 aa22.27■■□□□ 1.16
TRIM47-205ENST00000587774 NMT2O60551 498 aa22.27■■□□□ 1.16
TRIM47-205ENST00000587774 STAT2P52630 851 aa22.27■■□□□ 1.16
TRIM47-205ENST00000587774 SNX17Q15036 470 aa22.27■■□□□ 1.16
TRIM47-205ENST00000587774 SLC39A5Q6ZMH5 540 aa22.27■■□□□ 1.16
TRIM47-205ENST00000587774 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.27■■□□□ 1.16
TRIM47-205ENST00000587774 RASGRP2Q7LDG7 609 aa22.27■■□□□ 1.16
TRIM47-205ENST00000587774 CHMP4CQ96CF2 233 aa22.27■■□□□ 1.16
TRIM47-205ENST00000587774 GMCL1Q96IK5 515 aa22.27■■□□□ 1.16
TRIM47-205ENST00000587774 IL17RBQ9NRM6 502 aa22.27■■□□□ 1.16
TRIM47-205ENST00000587774 SYNGAP1Q96PV0 1343 aa22.27■■□□□ 1.16
TRIM47-205ENST00000587774 TMEM232C9JQI7 657 aa22.26■■□□□ 1.15
TRIM47-205ENST00000587774 AKR1A1P14550 325 aa22.26■■□□□ 1.15
TRIM47-205ENST00000587774 ADCYAP1R1P41586 468 aa22.26■■□□□ 1.15
TRIM47-205ENST00000587774 OAZ1P54368 228 aa22.26■■□□□ 1.15
TRIM47-205ENST00000587774 MSL3Q8N5Y2 521 aaKnown RBP22.26■■□□□ 1.15
TRIM47-205ENST00000587774 FERMT2Q96AC1 680 aa22.26■■□□□ 1.15
TRIM47-205ENST00000587774 CNPY2Q9Y2B0 182 aa22.26■■□□□ 1.15
TRIM47-205ENST00000587774 RANBP6O60518 1105 aaKnown RBP22.25■■□□□ 1.15
TRIM47-205ENST00000587774 PGK1P00558 417 aa22.25■■□□□ 1.15
TRIM47-205ENST00000587774 SLC1A4P43007 532 aa22.25■■□□□ 1.15
TRIM47-205ENST00000587774 AAMPQ13685 434 aa22.25■■□□□ 1.15
TRIM47-205ENST00000587774 LRIT3Q3SXY7 679 aa22.25■■□□□ 1.15
TRIM47-205ENST00000587774 TRIM60Q495X7 471 aa22.25■■□□□ 1.15
TRIM47-205ENST00000587774 MAMDC4Q6UXC1 1216 aa22.25■■□□□ 1.15
TRIM47-205ENST00000587774 SMC5Q8IY18 1101 aa22.25■■□□□ 1.15
TRIM47-205ENST00000587774 FGD4Q96M96 766 aa22.25■■□□□ 1.15
TRIM47-205ENST00000587774 HOMER2Q9NSB8 354 aa22.25■■□□□ 1.15
TRIM47-205ENST00000587774 UNC80Q8N2C7 3258 aa22.25■■□□□ 1.15
TRIM47-205ENST00000587774 SNAI1O95863 264 aaPredicted RBP22.24■■□□□ 1.15
TRIM47-205ENST00000587774 MCCP23508 829 aa22.24■■□□□ 1.15
TRIM47-205ENST00000587774 IKQ13123 557 aaPredicted RBP22.24■■□□□ 1.15
TRIM47-205ENST00000587774 NMIQ13287 307 aaPredicted RBP22.24■■□□□ 1.15
TRIM47-205ENST00000587774 ALX1Q15699 326 aa22.24■■□□□ 1.15
TRIM47-205ENST00000587774 MCMDC2Q4G0Z9 681 aa22.24■■□□□ 1.15
TRIM47-205ENST00000587774 PPP4R3BQ5MIZ7 849 aa22.24■■□□□ 1.15
TRIM47-205ENST00000587774 B4GALNT3Q6L9W6 998 aa22.24■■□□□ 1.15
TRIM47-205ENST00000587774 ZNF467Q7Z7K2 595 aaPredicted RBP22.24■■□□□ 1.15
TRIM47-205ENST00000587774 ZNF589Q86UQ0 364 aaPredicted RBP22.24■■□□□ 1.15
TRIM47-205ENST00000587774 ANKRD35Q8N283 1001 aa22.24■■□□□ 1.15
TRIM47-205ENST00000587774 CHST13Q8NET6 341 aa22.24■■□□□ 1.15
TRIM47-205ENST00000587774 PRKAG2Q9UGJ0 569 aa22.24■■□□□ 1.15
TRIM47-205ENST00000587774 FBXO40Q9UH90 709 aa22.24■■□□□ 1.15
TRIM47-205ENST00000587774 PHF24Q9UPV7 400 aa22.24■■□□□ 1.15
TRIM47-205ENST00000587774 ZNF536O15090 1300 aa22.24■■□□□ 1.15
TRIM47-205ENST00000587774 ZMYM6O95789 1325 aa22.24■■□□□ 1.15
TRIM47-205ENST00000587774 TRIM6-TRIM34B2RNG4 842 aa22.23■■□□□ 1.15
TRIM47-205ENST00000587774 ORC4O43929 436 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms