RNA–Protein interactions for RNA: ENST00000585967.5

MBD3-204, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-204ENST00000585967 IGKV6D-41A0A0C4DH26 115 aa20.23■□□□□ 0.83
MBD3-204ENST00000585967 MYCNP04198 464 aaPredicted RBP20.23■□□□□ 0.83
MBD3-204ENST00000585967 OAZ1P54368 228 aa20.23■□□□□ 0.83
MBD3-204ENST00000585967 RNF180Q86T96 592 aa20.23■□□□□ 0.83
MBD3-204ENST00000585967 NEDD1Q8NHV4 660 aa20.23■□□□□ 0.83
MBD3-204ENST00000585967 NUP88Q99567 741 aaPredicted RBP20.23■□□□□ 0.83
MBD3-204ENST00000585967 ATP2A1O14983 1001 aa20.22■□□□□ 0.83
MBD3-204ENST00000585967 AKR1A1P14550 325 aa20.22■□□□□ 0.83
MBD3-204ENST00000585967 HDAC1Q13547 482 aaPredicted RBP20.22■□□□□ 0.83
MBD3-204ENST00000585967 GJC2Q5T442 439 aaPredicted RBP20.22■□□□□ 0.83
MBD3-204ENST00000585967 REPS2Q8NFH8 660 aa20.22■□□□□ 0.83
MBD3-204ENST00000585967 KIFC2Q96AC6 838 aa20.22■□□□□ 0.83
MBD3-204ENST00000585967 TSPY2A6NKD2 308 aa20.21■□□□□ 0.83
MBD3-204ENST00000585967 PGK2P07205 417 aa20.21■□□□□ 0.83
MBD3-204ENST00000585967 BMP3P12645 472 aa20.21■□□□□ 0.83
MBD3-204ENST00000585967 STAT2P52630 851 aa20.21■□□□□ 0.83
MBD3-204ENST00000585967 ATN1P54259 1190 aaPredicted RBP20.21■□□□□ 0.83
MBD3-204ENST00000585967 TFAP4Q01664 338 aa20.21■□□□□ 0.83
MBD3-204ENST00000585967 IKQ13123 557 aaPredicted RBP20.21■□□□□ 0.83
MBD3-204ENST00000585967 ZNF792Q3KQV3 632 aa20.21■□□□□ 0.83
MBD3-204ENST00000585967 LRIT3Q3SXY7 679 aa20.21■□□□□ 0.83
MBD3-204ENST00000585967 LRRC47Q8N1G4 583 aaKnown RBP20.21■□□□□ 0.83
MBD3-204ENST00000585967 OTUD7AQ8TE49 926 aaPredicted RBP20.21■□□□□ 0.83
MBD3-204ENST00000585967 CHURC1Q8WUH1 139 aa20.21■□□□□ 0.83
MBD3-204ENST00000585967 CRBNQ96SW2 442 aa20.21■□□□□ 0.83
MBD3-204ENST00000585967 SEC62Q99442 399 aaKnown RBP20.21■□□□□ 0.83
MBD3-204ENST00000585967 XPNPEP3Q9NQH7 507 aa20.21■□□□□ 0.83
MBD3-204ENST00000585967 SYNGAP1Q96PV0 1343 aa20.21■□□□□ 0.83
MBD3-204ENST00000585967 LAMA4Q16363 1823 aa20.2■□□□□ 0.82
MBD3-204ENST00000585967 RTP1P59025 263 aa20.2■□□□□ 0.82
MBD3-204ENST00000585967 SLFN13Q68D06 897 aa20.2■□□□□ 0.82
MBD3-204ENST00000585967 FAM160B2Q86V87 743 aa20.2■□□□□ 0.82
MBD3-204ENST00000585967 CPXCR1Q8N123 301 aa20.2■□□□□ 0.82
MBD3-204ENST00000585967 ANKRD35Q8N283 1001 aa20.2■□□□□ 0.82
MBD3-204ENST00000585967 CHST13Q8NET6 341 aa20.2■□□□□ 0.82
MBD3-204ENST00000585967 SLC38A10Q9HBR0 1119 aa20.2■□□□□ 0.82
MBD3-204ENST00000585967 HELLSQ9NRZ9 838 aa20.2■□□□□ 0.82
MBD3-204ENST00000585967 STX8Q9UNK0 236 aa20.2■□□□□ 0.82
MBD3-204ENST00000585967 ATP11BQ9Y2G3 1177 aa20.2■□□□□ 0.82
MBD3-204ENST00000585967 SALL3Q9BXA9 1300 aa20.2■□□□□ 0.82
MBD3-204ENST00000585967 SLC1A4P43007 532 aa20.19■□□□□ 0.82
MBD3-204ENST00000585967 SLC4A3P48751 1232 aa20.19■□□□□ 0.82
MBD3-204ENST00000585967 FAM47AQ5JRC9 791 aa20.19■□□□□ 0.82
MBD3-204ENST00000585967 ANO1Q5XXA6 986 aa20.19■□□□□ 0.82
MBD3-204ENST00000585967 ZNF467Q7Z7K2 595 aaPredicted RBP20.19■□□□□ 0.82
MBD3-204ENST00000585967 PDE1AP54750 535 aa20.18■□□□□ 0.82
MBD3-204ENST00000585967 MFAP1P55081 439 aaKnown RBP20.18■□□□□ 0.82
MBD3-204ENST00000585967 MDM2Q00987 491 aaPredicted RBP20.18■□□□□ 0.82
MBD3-204ENST00000585967 LRRC41Q15345 812 aa20.18■□□□□ 0.82
MBD3-204ENST00000585967 PRAMEF19Q5SWL8 479 aa20.18■□□□□ 0.82
MBD3-204ENST00000585967 SLC39A5Q6ZMH5 540 aa20.18■□□□□ 0.82
MBD3-204ENST00000585967 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.18■□□□□ 0.82
MBD3-204ENST00000585967 GMCL1Q96IK5 515 aa20.18■□□□□ 0.82
MBD3-204ENST00000585967 TMEM232C9JQI7 657 aa20.17■□□□□ 0.82
MBD3-204ENST00000585967 C1orf53Q5VUE5 145 aa20.17■□□□□ 0.82
MBD3-204ENST00000585967 RWDD1Q9H446 243 aaPredicted RBP20.17■□□□□ 0.82
MBD3-204ENST00000585967 SPC25Q9HBM1 224 aa20.17■□□□□ 0.82
MBD3-204ENST00000585967 MYH6P13533 1939 aa20.16■□□□□ 0.82
MBD3-204ENST00000585967 RANBP6O60518 1105 aaKnown RBP20.16■□□□□ 0.82
MBD3-204ENST00000585967 ADCYAP1R1P41586 468 aa20.16■□□□□ 0.82
MBD3-204ENST00000585967 SNX17Q15036 470 aa20.16■□□□□ 0.82
MBD3-204ENST00000585967 MAMDC4Q6UXC1 1216 aa20.16■□□□□ 0.82
MBD3-204ENST00000585967 ACAD9Q9H845 621 aa20.16■□□□□ 0.82
MBD3-204ENST00000585967 RAVER2Q9HCJ3 691 aaKnown RBP20.16■□□□□ 0.82
MBD3-204ENST00000585967 PRDM5Q9NQX1 630 aaPredicted RBP20.16■□□□□ 0.82
MBD3-204ENST00000585967 TOMM22Q9NS69 142 aa20.16■□□□□ 0.82
MBD3-204ENST00000585967 ANAPC4Q9UJX5 808 aa20.16■□□□□ 0.82
MBD3-204ENST00000585967 ZHX1Q9UKY1 873 aaPredicted RBP20.16■□□□□ 0.82
MBD3-204ENST00000585967 FAM184BQ9ULE4 1060 aa20.16■□□□□ 0.82
MBD3-204ENST00000585967 PHF24Q9UPV7 400 aa20.16■□□□□ 0.82
MBD3-204ENST00000585967 ZMYM6O95789 1325 aa20.16■□□□□ 0.82
MBD3-204ENST00000585967 TRIM6-TRIM34B2RNG4 842 aa20.15■□□□□ 0.82
MBD3-204ENST00000585967 TKFCQ3LXA3 575 aa20.15■□□□□ 0.82
MBD3-204ENST00000585967 MCMDC2Q4G0Z9 681 aa20.15■□□□□ 0.82
MBD3-204ENST00000585967 NUP133Q8WUM0 1156 aa20.15■□□□□ 0.82
MBD3-204ENST00000585967 STAG1Q8WVM7 1258 aa20.15■□□□□ 0.82
MBD3-204ENST00000585967 LRCH3Q96II8 777 aa20.15■□□□□ 0.82
MBD3-204ENST00000585967 TSEN34Q9BSV6 310 aaKnown RBP20.15■□□□□ 0.82
MBD3-204ENST00000585967 ABHD16BQ9H3Z7 469 aa20.15■□□□□ 0.82
MBD3-204ENST00000585967 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.15■□□□□ 0.825e-6■■□□□ 11.4
MBD3-204ENST00000585967 DNAJC25-GNG10A0A024R161 153 aa20.14■□□□□ 0.81
MBD3-204ENST00000585967 SOX1O00570 391 aaPredicted RBP20.14■□□□□ 0.81
MBD3-204ENST00000585967 ORC4O43929 436 aa20.14■□□□□ 0.81
MBD3-204ENST00000585967 PLA2G6O60733 806 aa20.14■□□□□ 0.81
MBD3-204ENST00000585967 ZNF865P0CJ78 1059 aaPredicted RBP20.14■□□□□ 0.81
MBD3-204ENST00000585967 PCP11498 1178 aaKnown RBP20.14■□□□□ 0.81
MBD3-204ENST00000585967 ALX1Q15699 326 aa20.14■□□□□ 0.81
MBD3-204ENST00000585967 CCDC129Q6ZRS4 1044 aa20.14■□□□□ 0.81
MBD3-204ENST00000585967 RIPK3Q9Y572 518 aa20.14■□□□□ 0.81
MBD3-204ENST00000585967 LRRC37A2A6NM11 1700 aa20.13■□□□□ 0.81
MBD3-204ENST00000585967 MOXD2PA6NHM9 499 aa20.13■□□□□ 0.81
MBD3-204ENST00000585967 CTDSPL2Q05D32 466 aa20.13■□□□□ 0.81
MBD3-204ENST00000585967 TRIM60Q495X7 471 aa20.13■□□□□ 0.81
MBD3-204ENST00000585967 FERMT2Q96AC1 680 aa20.13■□□□□ 0.81
MBD3-204ENST00000585967 YTHDC1Q96MU7 727 aaKnown RBP20.13■□□□□ 0.81
MBD3-204ENST00000585967 HOMER2Q9NSB8 354 aa20.13■□□□□ 0.81
MBD3-204ENST00000585967 MROH7Q68CQ1 1323 aa20.12■□□□□ 0.81
MBD3-204ENST00000585967 PGK1P00558 417 aa20.12■□□□□ 0.81
MBD3-204ENST00000585967 MCCP23508 829 aa20.12■□□□□ 0.81
MBD3-204ENST00000585967 NT5C2P49902 561 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms