RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 PDE6AP16499 860 aa21.92■■□□□ 1.1
TOP3A-220ENST00000585031 STAT3P40763 770 aa21.92■■□□□ 1.1
TOP3A-220ENST00000585031 ICA1Q05084 483 aa21.92■■□□□ 1.1
TOP3A-220ENST00000585031 SLFNL1Q499Z3 407 aa21.92■■□□□ 1.1
TOP3A-220ENST00000585031 LCORLQ8N3X6 602 aa21.92■■□□□ 1.1
TOP3A-220ENST00000585031 NUP133Q8WUM0 1156 aa21.92■■□□□ 1.1
TOP3A-220ENST00000585031 LRFN3Q9BTN0 628 aa21.92■■□□□ 1.1
TOP3A-220ENST00000585031 YBX2Q9Y2T7 364 aaKnown RBP21.92■■□□□ 1.1
TOP3A-220ENST00000585031 CYP2D7A0A087X1C5 515 aa21.91■■□□□ 1.1
TOP3A-220ENST00000585031 TCRBV5S4A2TA0A5A2 114 aa21.91■■□□□ 1.1
TOP3A-220ENST00000585031 WDR46O15213 610 aaKnown RBP21.91■■□□□ 1.1
TOP3A-220ENST00000585031 KCTD2Q14681 263 aa21.91■■□□□ 1.1
TOP3A-220ENST00000585031 RAB30Q15771 203 aa21.91■■□□□ 1.1
TOP3A-220ENST00000585031 CRNKL1Q9BZJ0 848 aaKnown RBP21.91■■□□□ 1.1
TOP3A-220ENST00000585031 PPP1R12CQ9BZL4 782 aa21.91■■□□□ 1.1
TOP3A-220ENST00000585031 NKX2-4Q9H2Z4 354 aa21.91■■□□□ 1.1
TOP3A-220ENST00000585031 MSRAQ9UJ68 235 aa21.91■■□□□ 1.1
TOP3A-220ENST00000585031 MOXD2PA6NHM9 499 aa21.9■■□□□ 1.1
TOP3A-220ENST00000585031 PRKAB2O43741 272 aa21.9■■□□□ 1.1
TOP3A-220ENST00000585031 CENPBP07199 599 aaPredicted RBP21.9■■□□□ 1.1
TOP3A-220ENST00000585031 SLC9C2Q5TAH2 1124 aa21.9■■□□□ 1.1
TOP3A-220ENST00000585031 ARHGEF10LQ9HCE6 1279 aa21.9■■□□□ 1.1
TOP3A-220ENST00000585031 RIPK3Q9Y572 518 aa21.9■■□□□ 1.1
TOP3A-220ENST00000585031 ELP1O95163 1332 aa21.89■■□□□ 1.1
TOP3A-220ENST00000585031 ZNF532Q9HCE3 1301 aa21.89■■□□□ 1.1
TOP3A-220ENST00000585031 IPO8O15397 1037 aaKnown RBP21.89■■□□□ 1.09
TOP3A-220ENST00000585031 ASGR1P07306 291 aa21.89■■□□□ 1.09
TOP3A-220ENST00000585031 EEF2P13639 858 aaKnown RBP21.89■■□□□ 1.09
TOP3A-220ENST00000585031 CYP2C18P33260 490 aa21.89■■□□□ 1.09
TOP3A-220ENST00000585031 HERVK_113Q902F9 699 aa21.89■■□□□ 1.09
TOP3A-220ENST00000585031 TSPYL2Q9H2G4 693 aaPredicted RBP21.89■■□□□ 1.09
TOP3A-220ENST00000585031 EPHX3Q9H6B9 360 aa21.89■■□□□ 1.09
TOP3A-220ENST00000585031 FAM184BQ9ULE4 1060 aa21.89■■□□□ 1.09
TOP3A-220ENST00000585031 PPP1R9AQ9ULJ8 1098 aa21.89■■□□□ 1.09
TOP3A-220ENST00000585031 CNPY2Q9Y2B0 182 aa21.89■■□□□ 1.09
TOP3A-220ENST00000585031 PRRC2BQ5JSZ5 2229 aaKnown RBP21.88■■□□□ 1.09
TOP3A-220ENST00000585031 DNAJC25-GNG10A0A024R161 153 aa21.88■■□□□ 1.09
TOP3A-220ENST00000585031 CTAGE5O15320 804 aa21.88■■□□□ 1.09
TOP3A-220ENST00000585031 TFF2Q03403 129 aa21.88■■□□□ 1.09
TOP3A-220ENST00000585031 PSRC1Q6PGN9 363 aaPredicted RBP21.88■■□□□ 1.09
TOP3A-220ENST00000585031 MAMDC4Q6UXC1 1216 aa21.88■■□□□ 1.09
TOP3A-220ENST00000585031 FAM126BQ8IXS8 530 aa21.88■■□□□ 1.09
TOP3A-220ENST00000585031 TMEM199Q8N511 208 aa21.88■■□□□ 1.09
TOP3A-220ENST00000585031 FGD4Q96M96 766 aa21.88■■□□□ 1.09
TOP3A-220ENST00000585031 ARMT1Q9H993 441 aa21.88■■□□□ 1.09
TOP3A-220ENST00000585031 SWAP70Q9UH65 585 aa21.88■■□□□ 1.09
TOP3A-220ENST00000585031 UMODL1Q5DID0 1318 aa21.87■■□□□ 1.09
TOP3A-220ENST00000585031 MROH7Q68CQ1 1323 aa21.87■■□□□ 1.09
TOP3A-220ENST00000585031 ARVCFO00192 962 aa21.87■■□□□ 1.09
TOP3A-220ENST00000585031 DUSP11O75319 330 aaKnown RBP21.87■■□□□ 1.09
TOP3A-220ENST00000585031 CST5P28325 142 aaPredicted RBP21.87■■□□□ 1.09
TOP3A-220ENST00000585031 CDK8P49336 464 aa21.87■■□□□ 1.09
TOP3A-220ENST00000585031 FAM83BQ5T0W9 1011 aa21.87■■□□□ 1.09
TOP3A-220ENST00000585031 TMED8Q6PL24 325 aaPredicted RBP21.87■■□□□ 1.09
TOP3A-220ENST00000585031 SLC28A3Q9HAS3 691 aa21.87■■□□□ 1.09
TOP3A-220ENST00000585031 ZHX1Q9UKY1 873 aaPredicted RBP21.87■■□□□ 1.09
TOP3A-220ENST00000585031 GREB1LQ9C091 1923 aaPredicted RBP21.86■■□□□ 1.09
TOP3A-220ENST00000585031 CD4P01730 458 aa21.86■■□□□ 1.09
TOP3A-220ENST00000585031 CHGBP05060 677 aa21.86■■□□□ 1.09
TOP3A-220ENST00000585031 C6orf222P0C671 652 aaPredicted RBP21.86■■□□□ 1.09
TOP3A-220ENST00000585031 AAK1Q2M2I8 961 aa21.86■■□□□ 1.09
TOP3A-220ENST00000585031 AACSQ86V21 672 aa21.86■■□□□ 1.09
TOP3A-220ENST00000585031 VWCEQ96DN2 955 aa21.86■■□□□ 1.09
TOP3A-220ENST00000585031 GLT1D1Q96MS3 346 aa21.86■■□□□ 1.09
TOP3A-220ENST00000585031 NUP88Q99567 741 aaPredicted RBP21.86■■□□□ 1.09
TOP3A-220ENST00000585031 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.86■■□□□ 1.09
TOP3A-220ENST00000585031 UPF3AQ9H1J1 476 aaKnown RBP21.86■■□□□ 1.09
TOP3A-220ENST00000585031 IL23AQ9NPF7 189 aa21.86■■□□□ 1.09
TOP3A-220ENST00000585031 HCN4Q9Y3Q4 1203 aa21.86■■□□□ 1.09
TOP3A-220ENST00000585031 MYOGP15173 224 aa21.85■■□□□ 1.09
TOP3A-220ENST00000585031 RABGGTBP53611 331 aa21.85■■□□□ 1.09
TOP3A-220ENST00000585031 ACVR2BQ13705 512 aa21.85■■□□□ 1.09
TOP3A-220ENST00000585031 SH2D4AQ9H788 454 aa21.85■■□□□ 1.09
TOP3A-220ENST00000585031 EXOC6BQ9Y2D4 811 aa21.85■■□□□ 1.09
TOP3A-220ENST00000585031 ERC2O15083 957 aa21.84■■□□□ 1.09
TOP3A-220ENST00000585031 PTGS1P23219 599 aa21.84■■□□□ 1.09
TOP3A-220ENST00000585031 KCNQ1P51787 676 aa21.84■■□□□ 1.09
TOP3A-220ENST00000585031 GJA9P57773 515 aa21.84■■□□□ 1.09
TOP3A-220ENST00000585031 CCDC144BQ3MJ40 725 aa21.84■■□□□ 1.09
TOP3A-220ENST00000585031 C12orf60Q5U649 245 aa21.84■■□□□ 1.09
TOP3A-220ENST00000585031 MSL3Q8N5Y2 521 aaKnown RBP21.84■■□□□ 1.09
TOP3A-220ENST00000585031 VTI1AQ96AJ9 217 aa21.84■■□□□ 1.09
TOP3A-220ENST00000585031 A0A0U1RQG5 324 aaPredicted RBP21.83■■□□□ 1.09
TOP3A-220ENST00000585031 RLBP1P12271 317 aa21.83■■□□□ 1.09
TOP3A-220ENST00000585031 OTOP2Q7RTS6 562 aa21.83■■□□□ 1.09
TOP3A-220ENST00000585031 KATNBL1Q9H079 304 aa21.83■■□□□ 1.09
TOP3A-220ENST00000585031 IL1RAPL2Q9NP60 686 aa21.83■■□□□ 1.09
TOP3A-220ENST00000585031 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.83■■□□□ 1.09
TOP3A-220ENST00000585031 ASTN1O14525 1302 aa21.82■■□□□ 1.08
TOP3A-220ENST00000585031 GOLIM4O00461 696 aa21.82■■□□□ 1.08
TOP3A-220ENST00000585031 FGBP02675 491 aa21.82■■□□□ 1.08
TOP3A-220ENST00000585031 POU3F3P20264 500 aaPredicted RBP21.82■■□□□ 1.08
TOP3A-220ENST00000585031 BEX3Q00994 111 aa21.82■■□□□ 1.08
TOP3A-220ENST00000585031 GNASQ5JWF2 1037 aa21.82■■□□□ 1.08
TOP3A-220ENST00000585031 TMEM31Q5JXX7 168 aa21.82■■□□□ 1.08
TOP3A-220ENST00000585031 SNRNP48Q6IEG0 339 aaKnown RBP21.82■■□□□ 1.08
TOP3A-220ENST00000585031 C16orf86Q6ZW13 317 aa21.82■■□□□ 1.08
TOP3A-220ENST00000585031 PCSK9Q8NBP7 692 aaKnown RBP21.82■■□□□ 1.08
TOP3A-220ENST00000585031 CCDC17Q96LX7 622 aa21.82■■□□□ 1.08
TOP3A-220ENST00000585031 GRIN2DO15399 1336 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms