RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 ZAP70P43403 619 aa14.32□□□□□ -0.12
RNF43-208ENST00000584437 GPIHBP1Q8IV16 184 aa14.32□□□□□ -0.12
RNF43-208ENST00000584437 HAUS7Q99871 368 aa14.32□□□□□ -0.12
RNF43-208ENST00000584437 PCDHB13Q9Y5F0 798 aa14.32□□□□□ -0.12
RNF43-208ENST00000584437 HMGB1P1B2RPK0 211 aaPredicted RBP14.32□□□□□ -0.12
RNF43-208ENST00000584437 SMIM24O75264 130 aa14.32□□□□□ -0.12
RNF43-208ENST00000584437 RPN1P04843 607 aaKnown RBP14.32□□□□□ -0.12
RNF43-208ENST00000584437 ABCB4P21439 1286 aa14.32□□□□□ -0.12
RNF43-208ENST00000584437 RASEFQ8IZ41 740 aa14.32□□□□□ -0.12
RNF43-208ENST00000584437 PPP6R2O75170 966 aa14.32□□□□□ -0.12
RNF43-208ENST00000584437 SATB1Q01826 763 aa14.32□□□□□ -0.12
RNF43-208ENST00000584437 BLIDQ8IZY5 108 aa14.32□□□□□ -0.12
RNF43-208ENST00000584437 CACTINQ8WUQ7 758 aaKnown RBP14.32□□□□□ -0.12
RNF43-208ENST00000584437 ATP8A2Q9NTI2 1148 aa14.32□□□□□ -0.12
RNF43-208ENST00000584437 NRBP1Q9UHY1 535 aa14.32□□□□□ -0.12
RNF43-208ENST00000584437 TPX2Q9ULW0 747 aaKnown RBP14.32□□□□□ -0.12
RNF43-208ENST00000584437 JRKLQ9Y4A0 524 aa14.32□□□□□ -0.12
RNF43-208ENST00000584437 SHANK2Q9UPX8 1470 aa14.32□□□□□ -0.12
RNF43-208ENST00000584437 ATF2P15336 505 aa14.32□□□□□ -0.12
RNF43-208ENST00000584437 CD19P15391 556 aa14.32□□□□□ -0.12
RNF43-208ENST00000584437 CNOT10Q9H9A5 744 aaKnown RBP14.32□□□□□ -0.12
RNF43-208ENST00000584437 LONP1P36776 959 aaKnown RBP14.31□□□□□ -0.12
RNF43-208ENST00000584437 CCDC93Q567U6 631 aa14.31□□□□□ -0.12
RNF43-208ENST00000584437 CASP14P31944 242 aa14.31□□□□□ -0.12
RNF43-208ENST00000584437 FBXO18Q8NFZ0 1043 aa14.31□□□□□ -0.12
RNF43-208ENST00000584437 ZNF526Q8TF50 670 aaPredicted RBP14.31□□□□□ -0.12
RNF43-208ENST00000584437 HAUS2Q9NVX0 235 aa14.31□□□□□ -0.12
RNF43-208ENST00000584437 WDR7Q9Y4E6 1490 aa14.31□□□□□ -0.12
RNF43-208ENST00000584437 IFNB1P01574 187 aa14.31□□□□□ -0.12
RNF43-208ENST00000584437 GCP02774 474 aa14.31□□□□□ -0.12
RNF43-208ENST00000584437 EEF1GP26641 437 aaKnown RBP14.31□□□□□ -0.12
RNF43-208ENST00000584437 CEBPAP49715 358 aaPredicted RBP14.31□□□□□ -0.12
RNF43-208ENST00000584437 SPTLC3Q9NUV7 552 aa14.31□□□□□ -0.12
RNF43-208ENST00000584437 A0A0D9SFI3 127 aa14.31□□□□□ -0.12
RNF43-208ENST00000584437 SESN3P58005 492 aa14.31□□□□□ -0.12
RNF43-208ENST00000584437 CUL4AQ13619 759 aa14.31□□□□□ -0.12
RNF43-208ENST00000584437 SLC39A14Q15043 492 aa14.31□□□□□ -0.12
RNF43-208ENST00000584437 ZNF827Q17R98 1081 aa14.31□□□□□ -0.12
RNF43-208ENST00000584437 ZBTB17Q13105 803 aa14.31□□□□□ -0.12
RNF43-208ENST00000584437 KCTD16Q68DU8 428 aa14.31□□□□□ -0.12
RNF43-208ENST00000584437 TEKT1Q969V4 418 aa14.31□□□□□ -0.12
RNF43-208ENST00000584437 HAUS1Q96CS2 278 aa14.31□□□□□ -0.12
RNF43-208ENST00000584437 ZNF594Q96JF6 807 aaPredicted RBP14.31□□□□□ -0.12
RNF43-208ENST00000584437 SYCP2Q9BX26 1530 aa14.3□□□□□ -0.12
RNF43-208ENST00000584437 SLC1A4P43007 532 aa14.3□□□□□ -0.12
RNF43-208ENST00000584437 POLR2FP61218 127 aaKnown RBP14.3□□□□□ -0.12
RNF43-208ENST00000584437 PPARAQ07869 468 aa14.3□□□□□ -0.12
RNF43-208ENST00000584437 HADHQ16836 314 aaKnown RBP14.3□□□□□ -0.12
RNF43-208ENST00000584437 GPBP1Q86WP2 473 aa14.3□□□□□ -0.12
RNF43-208ENST00000584437 HAUS8Q9BT25 410 aa14.3□□□□□ -0.12
RNF43-208ENST00000584437 CUEDC2Q9H467 287 aa14.3□□□□□ -0.12
RNF43-208ENST00000584437 TMOD4Q9NZQ9 345 aa14.3□□□□□ -0.12
RNF43-208ENST00000584437 ARPP21Q9UBL0 812 aaPredicted RBP14.3□□□□□ -0.12
RNF43-208ENST00000584437 STAP2Q9UGK3 403 aa14.3□□□□□ -0.12
RNF43-208ENST00000584437 RTCBQ9Y3I0 505 aaKnown RBP14.3□□□□□ -0.12
RNF43-208ENST00000584437 SMCO2A6NFE2 343 aa14.3□□□□□ -0.12
RNF43-208ENST00000584437 PPFIA2O75334 1257 aa14.3□□□□□ -0.12
RNF43-208ENST00000584437 LMNB2Q03252 620 aa14.3□□□□□ -0.12
RNF43-208ENST00000584437 RPS6KA2Q15349 733 aa14.3□□□□□ -0.12
RNF43-208ENST00000584437 DDB1Q16531 1140 aa14.3□□□□□ -0.12
RNF43-208ENST00000584437 ALS2CLQ60I27 953 aa14.3□□□□□ -0.12
RNF43-208ENST00000584437 FANCBQ8NB91 859 aa14.3□□□□□ -0.12
RNF43-208ENST00000584437 AFG3L2Q9Y4W6 797 aa14.3□□□□□ -0.12
RNF43-208ENST00000584437 PCDHA5Q9Y5H7 936 aa14.3□□□□□ -0.12
RNF43-208ENST00000584437 RBM26Q5T8P6 1007 aaKnown RBP14.3□□□□□ -0.12
RNF43-208ENST00000584437 POLR3EQ9NVU0 708 aa14.3□□□□□ -0.12
RNF43-208ENST00000584437 ADCY9O60503 1353 aa14.3□□□□□ -0.12
RNF43-208ENST00000584437 DTNBO60941 627 aa14.3□□□□□ -0.12
RNF43-208ENST00000584437 OR52Z1P0C646 297 aa14.29□□□□□ -0.12
RNF43-208ENST00000584437 CLCN6P51797 869 aa14.29□□□□□ -0.12
RNF43-208ENST00000584437 PPP2R5DQ14738 602 aa14.29□□□□□ -0.12
RNF43-208ENST00000584437 EHHADHQ08426 723 aa14.29□□□□□ -0.12
RNF43-208ENST00000584437 FNBP4Q8N3X1 1017 aaPredicted RBP14.29□□□□□ -0.12
RNF43-208ENST00000584437 TUBB6Q9BUF5 446 aa14.29□□□□□ -0.12
RNF43-208ENST00000584437 OSBPL3Q9H4L5 887 aa14.29□□□□□ -0.12
RNF43-208ENST00000584437 TRPC6Q9Y210 931 aa14.29□□□□□ -0.12
RNF43-208ENST00000584437 SART1O43290 800 aaKnown RBP14.29□□□□□ -0.12
RNF43-208ENST00000584437 PFDN1O60925 122 aa14.29□□□□□ -0.12
RNF43-208ENST00000584437 TFAP4Q01664 338 aa14.29□□□□□ -0.12
RNF43-208ENST00000584437 TRIM42Q8IWZ5 723 aa14.29□□□□□ -0.12
RNF43-208ENST00000584437 NSMCE1Q8WV22 266 aa14.29□□□□□ -0.12
RNF43-208ENST00000584437 VTI1AQ96AJ9 217 aa14.29□□□□□ -0.12
RNF43-208ENST00000584437 ACSBG1Q96GR2 724 aa14.29□□□□□ -0.12
RNF43-208ENST00000584437 PARD6BQ9BYG5 372 aa14.29□□□□□ -0.12
RNF43-208ENST00000584437 AATFQ9NY61 560 aaKnown RBP eCLIP14.29□□□□□ -0.12
RNF43-208ENST00000584437 GOLGA8QA0A0J9YX86 632 aa14.29□□□□□ -0.12
RNF43-208ENST00000584437 GOLGA8OA6NCC3 632 aa14.29□□□□□ -0.12
RNF43-208ENST00000584437 GOLGA8NF8WBI6 632 aa14.29□□□□□ -0.12
RNF43-208ENST00000584437 HEXIM1O94992 359 aaKnown RBP14.29□□□□□ -0.12
RNF43-208ENST00000584437 P4HA1P13674 534 aa14.29□□□□□ -0.12
RNF43-208ENST00000584437 NLRP7Q8WX94 980 aa14.29□□□□□ -0.12
RNF43-208ENST00000584437 LSG1Q9H089 658 aaKnown RBP14.29□□□□□ -0.12
RNF43-208ENST00000584437 ANTXR1Q9H6X2 564 aa14.29□□□□□ -0.12
RNF43-208ENST00000584437 CLIC4Q9Y696 253 aa14.29□□□□□ -0.12
RNF43-208ENST00000584437 DNAJC8O75937 253 aaPredicted RBP14.28□□□□□ -0.12
RNF43-208ENST00000584437 TAF12Q16514 161 aa14.28□□□□□ -0.12
RNF43-208ENST00000584437 RBM17Q96I25 401 aaKnown RBP14.28□□□□□ -0.12
RNF43-208ENST00000584437 HSPD1P10809 573 aaKnown RBP14.28□□□□□ -0.12
RNF43-208ENST00000584437 PDIA3P30101 505 aaKnown RBP14.28□□□□□ -0.12
RNF43-208ENST00000584437 KLHL29Q96CT2 875 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms