RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 NEDD4P46934 1319 aa16.46■□□□□ 0.23
GGA3-215ENST00000582821 ZBED4O75132 1171 aa16.46■□□□□ 0.23
GGA3-215ENST00000582821 IGHA2P01877 340 aa16.46■□□□□ 0.23
GGA3-215ENST00000582821 MAP3K21Q5TCX8 1036 aa16.46■□□□□ 0.23
GGA3-215ENST00000582821 SAMD1Q6SPF0 538 aaPredicted RBP16.46■□□□□ 0.23
GGA3-215ENST00000582821 NCAPG2Q86XI2 1143 aa16.46■□□□□ 0.23
GGA3-215ENST00000582821 DCAF4Q8WV16 495 aa16.46■□□□□ 0.23
GGA3-215ENST00000582821 MAP4K1Q92918 833 aa16.46■□□□□ 0.23
GGA3-215ENST00000582821 KRT23Q9C075 422 aa16.46■□□□□ 0.23
GGA3-215ENST00000582821 SLC38A10Q9HBR0 1119 aa16.46■□□□□ 0.23
GGA3-215ENST00000582821 PAK6Q9NQU5 681 aaPredicted RBP16.46■□□□□ 0.23
GGA3-215ENST00000582821 U3KPZ7 1027 aaPredicted RBP16.46■□□□□ 0.23
GGA3-215ENST00000582821 ZNF236Q9UL36 1845 aa16.46■□□□□ 0.23
GGA3-215ENST00000582821 RPTORQ8N122 1335 aa16.45■□□□□ 0.22
GGA3-215ENST00000582821 TMEM232C9JQI7 657 aa16.45■□□□□ 0.22
GGA3-215ENST00000582821 KDM4AO75164 1064 aa16.45■□□□□ 0.22
GGA3-215ENST00000582821 SGPL1O95470 568 aa16.45■□□□□ 0.22
GGA3-215ENST00000582821 ZKSCAN1P17029 563 aaPredicted RBP16.45■□□□□ 0.22
GGA3-215ENST00000582821 STAT2P52630 851 aa16.45■□□□□ 0.22
GGA3-215ENST00000582821 OAZ1P54368 228 aa16.45■□□□□ 0.22
GGA3-215ENST00000582821 IQCA1Q86XH1 822 aa16.45■□□□□ 0.22
GGA3-215ENST00000582821 TEX13BQ9BXU2 312 aa16.45■□□□□ 0.22
GGA3-215ENST00000582821 ZSWIM5Q9P217 1185 aa16.45■□□□□ 0.22
GGA3-215ENST00000582821 B4E1Z4 1266 aa16.44■□□□□ 0.22
GGA3-215ENST00000582821 CENPBP07199 599 aaPredicted RBP16.44■□□□□ 0.22
GGA3-215ENST00000582821 CYP21A2P08686 494 aa16.44■□□□□ 0.22
GGA3-215ENST00000582821 FCER1AP12319 257 aa16.44■□□□□ 0.22
GGA3-215ENST00000582821 ADORA2AP29274 412 aa16.44■□□□□ 0.22
GGA3-215ENST00000582821 CCL14Q16627 93 aa16.44■□□□□ 0.22
GGA3-215ENST00000582821 BTNL9Q6UXG8 535 aa16.44■□□□□ 0.22
GGA3-215ENST00000582821 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.44■□□□□ 0.22
GGA3-215ENST00000582821 SKAP1Q86WV1 359 aa16.44■□□□□ 0.22
GGA3-215ENST00000582821 NPLOC4Q8TAT6 608 aa16.44■□□□□ 0.22
GGA3-215ENST00000582821 U2AF1L4Q8WU68 220 aaKnown RBP16.44■□□□□ 0.22
GGA3-215ENST00000582821 KIFC2Q96AC6 838 aa16.44■□□□□ 0.22
GGA3-215ENST00000582821 HMX1Q9NP08 348 aaPredicted RBP16.44■□□□□ 0.22
GGA3-215ENST00000582821 SLC5A4Q9NY91 659 aa16.44■□□□□ 0.22
GGA3-215ENST00000582821 COBLO75128 1261 aa16.43■□□□□ 0.22
GGA3-215ENST00000582821 SNHG28P0DPA3 235 aa16.43■□□□□ 0.22
GGA3-215ENST00000582821 TRIM32Q13049 653 aa16.43■□□□□ 0.22
GGA3-215ENST00000582821 OLFML2BQ68BL8 750 aa16.43■□□□□ 0.22
GGA3-215ENST00000582821 KCTD1Q719H9 257 aa16.43■□□□□ 0.22
GGA3-215ENST00000582821 DPP9Q86TI2 863 aa16.43■□□□□ 0.22
GGA3-215ENST00000582821 SHISA4Q96DD7 197 aa16.43■□□□□ 0.22
GGA3-215ENST00000582821 ZSCAN10Q96SZ4 725 aaPredicted RBP16.43■□□□□ 0.22
GGA3-215ENST00000582821 ESYT1Q9BSJ8 1104 aa16.43■□□□□ 0.22
GGA3-215ENST00000582821 CRISPLD2Q9H0B8 497 aa16.43■□□□□ 0.22
GGA3-215ENST00000582821 FLRT1Q9NZU1 646 aa16.43■□□□□ 0.22
GGA3-215ENST00000582821 RIPK3Q9Y572 518 aa16.43■□□□□ 0.22
GGA3-215ENST00000582821 PDHBP11177 359 aa16.42■□□□□ 0.22
GGA3-215ENST00000582821 PRKAR2AP13861 404 aaKnown RBP16.42■□□□□ 0.22
GGA3-215ENST00000582821 CACNB2Q08289 660 aaPredicted RBP16.42■□□□□ 0.22
GGA3-215ENST00000582821 MFSD14CQ5VZR4 134 aa16.42■□□□□ 0.22
GGA3-215ENST00000582821 SNRNP48Q6IEG0 339 aaKnown RBP16.42■□□□□ 0.22
GGA3-215ENST00000582821 KIAA1211Q6ZU35 1233 aa16.42■□□□□ 0.22
GGA3-215ENST00000582821 DEFB118Q96PH6 123 aa16.42■□□□□ 0.22
GGA3-215ENST00000582821 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.42■□□□□ 0.22
GGA3-215ENST00000582821 DIS3Q9Y2L1 958 aaKnown RBP16.42■□□□□ 0.22
GGA3-215ENST00000582821 CTDP1Q9Y5B0 961 aaPredicted RBP16.42■□□□□ 0.22
GGA3-215ENST00000582821 SMCHD1A6NHR9 2005 aa16.41■□□□□ 0.22
GGA3-215ENST00000582821 TRDNQ13061 729 aa16.41■□□□□ 0.22
GGA3-215ENST00000582821 KCTD2Q14681 263 aa16.41■□□□□ 0.22
GGA3-215ENST00000582821 UBE2Q1Q7Z7E8 422 aa16.41■□□□□ 0.22
GGA3-215ENST00000582821 CPXCR1Q8N123 301 aa16.41■□□□□ 0.22
GGA3-215ENST00000582821 CHST13Q8NET6 341 aa16.41■□□□□ 0.22
GGA3-215ENST00000582821 MMP19Q99542 508 aa16.41■□□□□ 0.22
GGA3-215ENST00000582821 ZKSCAN3Q9BRR0 538 aa16.41■□□□□ 0.22
GGA3-215ENST00000582821 LSG1Q9H089 658 aaKnown RBP16.41■□□□□ 0.22
GGA3-215ENST00000582821 RAVER2Q9HCJ3 691 aaKnown RBP16.41■□□□□ 0.22
GGA3-215ENST00000582821 FBXO40Q9UH90 709 aa16.41■□□□□ 0.22
GGA3-215ENST00000582821 PRR12Q9ULL5 1215 aa16.41■□□□□ 0.22
GGA3-215ENST00000582821 ZNF536O15090 1300 aa16.41■□□□□ 0.22
GGA3-215ENST00000582821 PLXNA1Q9UIW2 1896 aa16.4■□□□□ 0.22
GGA3-215ENST00000582821 ZNF543Q08ER8 600 aa16.4■□□□□ 0.22
GGA3-215ENST00000582821 ZNF792Q3KQV3 632 aa16.4■□□□□ 0.22
GGA3-215ENST00000582821 TKFCQ3LXA3 575 aa16.4■□□□□ 0.22
GGA3-215ENST00000582821 TTBK2Q6IQ55 1244 aa16.4■□□□□ 0.22
GGA3-215ENST00000582821 RASGRP2Q7LDG7 609 aa16.4■□□□□ 0.22
GGA3-215ENST00000582821 ENAHQ8N8S7 591 aaPredicted RBP16.4■□□□□ 0.22
GGA3-215ENST00000582821 PPP4R2Q9NY27 417 aa16.4■□□□□ 0.22
GGA3-215ENST00000582821 RBM8AQ9Y5S9 174 aaKnown RBP16.4■□□□□ 0.22
GGA3-215ENST00000582821 TFRCP02786 760 aaKnown RBP16.39■□□□□ 0.21
GGA3-215ENST00000582821 IKQ13123 557 aaPredicted RBP16.39■□□□□ 0.21
GGA3-215ENST00000582821 SEC23AQ15436 765 aa16.39■□□□□ 0.21
GGA3-215ENST00000582821 CCDC96Q2M329 555 aa16.39■□□□□ 0.21
GGA3-215ENST00000582821 GPATCH4Q5T3I0 446 aaKnown RBP16.39■□□□□ 0.21
GGA3-215ENST00000582821 CYB5R4Q7L1T6 521 aa16.39■□□□□ 0.21
GGA3-215ENST00000582821 PNMA1Q8ND90 353 aa16.39■□□□□ 0.21
GGA3-215ENST00000582821 CHMP4CQ96CF2 233 aa16.39■□□□□ 0.21
GGA3-215ENST00000582821 MAML3Q96JK9 1138 aa16.39■□□□□ 0.21
GGA3-215ENST00000582821 UBAC1Q9BSL1 405 aa16.39■□□□□ 0.21
GGA3-215ENST00000582821 RANBP17Q9H2T7 1088 aaKnown RBP16.39■□□□□ 0.21
GGA3-215ENST00000582821 KAT14Q9H8E8 782 aa16.39■□□□□ 0.21
GGA3-215ENST00000582821 ISY1Q9ULR0 285 aaKnown RBP16.39■□□□□ 0.21
GGA3-215ENST00000582821 MTMR7Q9Y216 660 aa16.39■□□□□ 0.21
GGA3-215ENST00000582821 TNKSO95271 1327 aa16.39■□□□□ 0.21
GGA3-215ENST00000582821 DNAJC25-GNG10A0A024R161 153 aa16.38■□□□□ 0.21
GGA3-215ENST00000582821 E7EWF7 191 aa16.38■□□□□ 0.21
GGA3-215ENST00000582821 NECTIN1Q15223 517 aa16.38■□□□□ 0.21
GGA3-215ENST00000582821 SYDE2Q5VT97 1194 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms