RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 SCNN1DP51172 638 aa15.49■□□□□ 0.07
SRSF1-205ENST00000582730 E4F1Q66K89 784 aaPredicted RBP15.49■□□□□ 0.07
SRSF1-205ENST00000582730 UBR3Q6ZT12 1888 aa15.48■□□□□ 0.07
SRSF1-205ENST00000582730 HOXA10P31260 410 aaPredicted RBP15.48■□□□□ 0.07
SRSF1-205ENST00000582730 UBA5Q9GZZ9 404 aa15.48■□□□□ 0.07
SRSF1-205ENST00000582730 TCP11L1Q9NUJ3 509 aa15.48■□□□□ 0.07
SRSF1-205ENST00000582730 INTS13Q9NVM9 706 aa15.48■□□□□ 0.07
SRSF1-205ENST00000582730 FRMPD2Q68DX3 1309 aaPredicted RBP15.48■□□□□ 0.07
SRSF1-205ENST00000582730 CD44P16070 742 aaKnown RBP15.48■□□□□ 0.07
SRSF1-205ENST00000582730 KARSQ15046 597 aaKnown RBP15.48■□□□□ 0.07
SRSF1-205ENST00000582730 SH3GLB2Q9NR46 395 aa15.48■□□□□ 0.07
SRSF1-205ENST00000582730 SEC63Q9UGP8 760 aaKnown RBP15.48■□□□□ 0.07
SRSF1-205ENST00000582730 PCDHA6Q9UN73 950 aa15.48■□□□□ 0.07
SRSF1-205ENST00000582730 TTF2Q9UNY4 1162 aaKnown RBP15.48■□□□□ 0.07
SRSF1-205ENST00000582730 PCDHA8Q9Y5H6 950 aa15.48■□□□□ 0.07
SRSF1-205ENST00000582730 PALM3A6NDB9 673 aaPredicted RBP15.48■□□□□ 0.07
SRSF1-205ENST00000582730 PP2D1A8MPX8 630 aa15.48■□□□□ 0.07
SRSF1-205ENST00000582730 STAT6P42226 847 aa15.48■□□□□ 0.07
SRSF1-205ENST00000582730 DPYDQ12882 1025 aa15.48■□□□□ 0.07
SRSF1-205ENST00000582730 DTHD1Q6ZMT9 781 aa15.48■□□□□ 0.07
SRSF1-205ENST00000582730 CLEC10AQ8IUN9 316 aa15.48■□□□□ 0.07
SRSF1-205ENST00000582730 LRRC47Q8N1G4 583 aaKnown RBP15.48■□□□□ 0.07
SRSF1-205ENST00000582730 NEDD1Q8NHV4 660 aa15.48■□□□□ 0.07
SRSF1-205ENST00000582730 MED15Q96RN5 788 aa15.48■□□□□ 0.07
SRSF1-205ENST00000582730 BARHL2Q9NY43 387 aa15.48■□□□□ 0.07
SRSF1-205ENST00000582730 STXBP3O00186 592 aa15.47■□□□□ 0.07
SRSF1-205ENST00000582730 MYO1BO43795 1136 aa15.47■□□□□ 0.07
SRSF1-205ENST00000582730 MSL1Q68DK7 614 aa15.47■□□□□ 0.07
SRSF1-205ENST00000582730 NYAP1Q6ZVC0 841 aa15.47■□□□□ 0.07
SRSF1-205ENST00000582730 PROM2Q8N271 834 aa15.47■□□□□ 0.07
SRSF1-205ENST00000582730 SPATA20Q8TB22 786 aa15.47■□□□□ 0.07
SRSF1-205ENST00000582730 PPP1R13BQ96KQ4 1090 aa15.47■□□□□ 0.07
SRSF1-205ENST00000582730 TMX4Q9H1E5 349 aaPredicted RBP15.47■□□□□ 0.07
SRSF1-205ENST00000582730 CTNND2Q9UQB3 1225 aa15.47■□□□□ 0.07
SRSF1-205ENST00000582730 SNED1Q8TER0 1413 aa15.47■□□□□ 0.07
SRSF1-205ENST00000582730 ATP2B2Q01814 1243 aa15.47■□□□□ 0.07
SRSF1-205ENST00000582730 CUL4BQ13620 913 aa15.47■□□□□ 0.07
SRSF1-205ENST00000582730 DHX8Q14562 1220 aaKnown RBP15.47■□□□□ 0.07
SRSF1-205ENST00000582730 SOGA3Q5TF21 947 aa15.47■□□□□ 0.07
SRSF1-205ENST00000582730 RRAGBQ5VZM2 374 aa15.47■□□□□ 0.07
SRSF1-205ENST00000582730 FBXO38Q6PIJ6 1188 aa15.47■□□□□ 0.07
SRSF1-205ENST00000582730 SH3RF1Q7Z6J0 888 aa15.47■□□□□ 0.07
SRSF1-205ENST00000582730 GSDMAQ96QA5 445 aa15.47■□□□□ 0.07
SRSF1-205ENST00000582730 MAPK8IP1Q9UQF2 711 aa15.47■□□□□ 0.07
SRSF1-205ENST00000582730 ERCC5P28715 1186 aaPredicted RBP15.46■□□□□ 0.07
SRSF1-205ENST00000582730 ELF2Q15723 593 aa15.46■□□□□ 0.07
SRSF1-205ENST00000582730 LETM2Q2VYF4 491 aa15.46■□□□□ 0.07
SRSF1-205ENST00000582730 DPP8Q6V1X1 898 aaPredicted RBP15.46■□□□□ 0.07
SRSF1-205ENST00000582730 SP8Q8IXZ3 490 aa15.46■□□□□ 0.07
SRSF1-205ENST00000582730 RRP36Q96EU6 259 aaKnown RBP15.46■□□□□ 0.07
SRSF1-205ENST00000582730 TMEM60Q9H2L4 133 aa15.46■□□□□ 0.07
SRSF1-205ENST00000582730 USP17L5A8MUK1 530 aa15.46■□□□□ 0.07
SRSF1-205ENST00000582730 ZNF18P17022 549 aa15.46■□□□□ 0.07
SRSF1-205ENST00000582730 NT5C2P49902 561 aa15.46■□□□□ 0.07
SRSF1-205ENST00000582730 ADKP55263 362 aaKnown RBP15.46■□□□□ 0.07
SRSF1-205ENST00000582730 PIGSQ96S52 555 aa15.46■□□□□ 0.07
SRSF1-205ENST00000582730 LZTS2Q9BRK4 669 aa15.46■□□□□ 0.07
SRSF1-205ENST00000582730 ZNF219Q9P2Y4 722 aaPredicted RBP15.46■□□□□ 0.07
SRSF1-205ENST00000582730 ATP6V0A2Q9Y487 856 aa15.46■□□□□ 0.07
SRSF1-205ENST00000582730 SMCO2A6NFE2 343 aa15.46■□□□□ 0.06
SRSF1-205ENST00000582730 RAD21O60216 631 aa15.46■□□□□ 0.06
SRSF1-205ENST00000582730 ZNF622Q969S3 477 aaKnown RBP eCLIP15.46■□□□□ 0.064e-15■■□□□ 12.1
SRSF1-205ENST00000582730 COA1Q9GZY4 146 aa15.46■□□□□ 0.06
SRSF1-205ENST00000582730 GAKO14976 1311 aa15.45■□□□□ 0.06
SRSF1-205ENST00000582730 LONP1P36776 959 aaKnown RBP15.45■□□□□ 0.06
SRSF1-205ENST00000582730 UBA7P41226 1012 aa15.45■□□□□ 0.06
SRSF1-205ENST00000582730 E2F4Q16254 413 aa15.45■□□□□ 0.06
SRSF1-205ENST00000582730 SPECC1LQ69YQ0 1117 aa15.45■□□□□ 0.06
SRSF1-205ENST00000582730 FAM53CQ9NYF3 392 aa15.45■□□□□ 0.06
SRSF1-205ENST00000582730 MPHOSPH10O00566 681 aaKnown RBP15.45■□□□□ 0.06
SRSF1-205ENST00000582730 CCNT1O60563 726 aaKnown RBP15.45■□□□□ 0.06
SRSF1-205ENST00000582730 SPATA1Q5VX52 437 aa15.45■□□□□ 0.06
SRSF1-205ENST00000582730 ARL6IP4Q66PJ3 421 aaKnown RBP15.45■□□□□ 0.06
SRSF1-205ENST00000582730 SYT10Q6XYQ8 523 aa15.45■□□□□ 0.06
SRSF1-205ENST00000582730 CERS5Q8N5B7 392 aa15.45■□□□□ 0.06
SRSF1-205ENST00000582730 USP40Q9NVE5 1235 aa15.45■□□□□ 0.06
SRSF1-205ENST00000582730 JAKMIP3Q5VZ66 844 aa15.44■□□□□ 0.06
SRSF1-205ENST00000582730 PDXDC2PQ6P474 469 aa15.44■□□□□ 0.06
SRSF1-205ENST00000582730 COL23A1Q86Y22 540 aaPredicted RBP15.44■□□□□ 0.06
SRSF1-205ENST00000582730 FAM177A1Q8N128 213 aaPredicted RBP15.44■□□□□ 0.06
SRSF1-205ENST00000582730 CCDC12Q8WUD4 166 aaPredicted RBP15.44■□□□□ 0.06
SRSF1-205ENST00000582730 CPLX3Q8WVH0 158 aa15.44■□□□□ 0.06
SRSF1-205ENST00000582730 FAM163AQ96GL9 167 aaPredicted RBP15.44■□□□□ 0.06
SRSF1-205ENST00000582730 ERO1AQ96HE7 468 aa15.44■□□□□ 0.06
SRSF1-205ENST00000582730 GPCPD1Q9NPB8 672 aa15.44■□□□□ 0.06
SRSF1-205ENST00000582730 ST7Q9NRC1 585 aa15.44■□□□□ 0.06
SRSF1-205ENST00000582730 CCDC66A2RUB6 948 aa15.44■□□□□ 0.06
SRSF1-205ENST00000582730 MMP10P09238 476 aa15.44■□□□□ 0.06
SRSF1-205ENST00000582730 AKR1B1P15121 316 aa15.44■□□□□ 0.06
SRSF1-205ENST00000582730 PYM1Q9BRP8 204 aaKnown RBP15.44■□□□□ 0.06
SRSF1-205ENST00000582730 C6orf50Q9HD87 102 aa15.44■□□□□ 0.06
SRSF1-205ENST00000582730 DDX4Q9NQI0 724 aaKnown RBP15.44■□□□□ 0.06
SRSF1-205ENST00000582730 GTPBP6O43824 516 aaPredicted RBP15.43■□□□□ 0.06
SRSF1-205ENST00000582730 SRGNP10124 158 aa15.43■□□□□ 0.06
SRSF1-205ENST00000582730 C4orf32Q8N8J7 132 aa15.43■□□□□ 0.06
SRSF1-205ENST00000582730 MTRQ99707 1265 aa15.43■□□□□ 0.06
SRSF1-205ENST00000582730 SPZ1Q9BXG8 430 aa15.43■□□□□ 0.06
SRSF1-205ENST00000582730 BIN2Q9UBW5 565 aaPredicted RBP15.43■□□□□ 0.06
SRSF1-205ENST00000582730 PPP1R3GB7ZBB8 358 aa15.43■□□□□ 0.06
SRSF1-205ENST00000582730 TEX33O43247 280 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms