RNA–Protein interactions for RNA: ENST00000582544.1

CACNB1-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 2

Gene CACNB1, Length 406 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-210ENST00000582544 FGD4Q96M96 766 aa9.43□□□□□ -0.9
CACNB1-210ENST00000582544 LRRCC1Q9C099 1032 aa9.43□□□□□ -0.9
CACNB1-210ENST00000582544 UBE2OQ9C0C9 1292 aaKnown RBP9.43□□□□□ -0.9
CACNB1-210ENST00000582544 SENP6Q9GZR1 1112 aaPredicted RBP9.43□□□□□ -0.9
CACNB1-210ENST00000582544 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.43□□□□□ -0.9
CACNB1-210ENST00000582544 DCTPP1Q9H773 170 aa9.43□□□□□ -0.9
CACNB1-210ENST00000582544 KANSL2Q9H9L4 492 aa9.43□□□□□ -0.9
CACNB1-210ENST00000582544 ARHGEF10LQ9HCE6 1279 aa9.43□□□□□ -0.9
CACNB1-210ENST00000582544 STXBP5LQ9Y2K9 1186 aa9.43□□□□□ -0.9
CACNB1-210ENST00000582544 DIS3Q9Y2L1 958 aaKnown RBP9.43□□□□□ -0.9
CACNB1-210ENST00000582544 SLC4A4Q9Y6R1 1079 aa9.43□□□□□ -0.9
CACNB1-210ENST00000582544 MYH6P13533 1939 aa9.43□□□□□ -0.9
CACNB1-210ENST00000582544 REV3LO60673 3130 aa9.42□□□□□ -0.9
CACNB1-210ENST00000582544 LAMA4Q16363 1823 aa9.42□□□□□ -0.9
CACNB1-210ENST00000582544 SALL3Q9BXA9 1300 aa9.42□□□□□ -0.9
CACNB1-210ENST00000582544 ATP2A1O14983 1001 aa9.42□□□□□ -0.9
CACNB1-210ENST00000582544 FOXP2O15409 715 aa9.42□□□□□ -0.9
CACNB1-210ENST00000582544 SLC25A27O95847 323 aa9.42□□□□□ -0.9
CACNB1-210ENST00000582544 TAL1P17542 331 aaPredicted RBP9.42□□□□□ -0.9
CACNB1-210ENST00000582544 FAM47AQ5JRC9 791 aa9.42□□□□□ -0.9
CACNB1-210ENST00000582544 PRAMEF19Q5SWL8 479 aa9.42□□□□□ -0.9
CACNB1-210ENST00000582544 GJC2Q5T442 439 aaPredicted RBP9.42□□□□□ -0.9
CACNB1-210ENST00000582544 WDR78Q5VTH9 848 aa9.42□□□□□ -0.9
CACNB1-210ENST00000582544 B4GALNT3Q6L9W6 998 aa9.42□□□□□ -0.9
CACNB1-210ENST00000582544 SLC39A5Q6ZMH5 540 aa9.42□□□□□ -0.9
CACNB1-210ENST00000582544 DPP9Q86TI2 863 aa9.42□□□□□ -0.9
CACNB1-210ENST00000582544 KBTBD3Q8NAB2 608 aa9.42□□□□□ -0.9
CACNB1-210ENST00000582544 GUCD1Q96NT3 240 aa9.42□□□□□ -0.9
CACNB1-210ENST00000582544 SH2D4AQ9H788 454 aa9.42□□□□□ -0.9
CACNB1-210ENST00000582544 PDLIM7Q9NR12 457 aa9.42□□□□□ -0.9
CACNB1-210ENST00000582544 NYAP2Q9P242 653 aa9.42□□□□□ -0.9
CACNB1-210ENST00000582544 ARPP21Q9UBL0 812 aaPredicted RBP9.42□□□□□ -0.9
CACNB1-210ENST00000582544 PHF24Q9UPV7 400 aa9.42□□□□□ -0.9
CACNB1-210ENST00000582544 TRANK1O15050 2925 aa9.42□□□□□ -0.9
CACNB1-210ENST00000582544 SCN10AQ9Y5Y9 1956 aa9.41□□□□□ -0.9
CACNB1-210ENST00000582544 TRIM43BA6NCK2 446 aa9.41□□□□□ -0.9
CACNB1-210ENST00000582544 ADAMTS4O75173 837 aa9.41□□□□□ -0.9
CACNB1-210ENST00000582544 ITGB8P26012 769 aa9.41□□□□□ -0.9
CACNB1-210ENST00000582544 ATN1P54259 1190 aaPredicted RBP9.41□□□□□ -0.9
CACNB1-210ENST00000582544 FAM83BQ5T0W9 1011 aa9.41□□□□□ -0.9
CACNB1-210ENST00000582544 CCSAPQ6IQ19 270 aaPredicted RBP9.41□□□□□ -0.9
CACNB1-210ENST00000582544 MAMDC4Q6UXC1 1216 aa9.41□□□□□ -0.9
CACNB1-210ENST00000582544 SH3RF1Q7Z6J0 888 aa9.41□□□□□ -0.9
CACNB1-210ENST00000582544 NCAPG2Q86XI2 1143 aa9.41□□□□□ -0.9
CACNB1-210ENST00000582544 MKL1Q969V6 931 aa9.41□□□□□ -0.9
CACNB1-210ENST00000582544 TRIM43Q96BQ3 446 aaPredicted RBP9.41□□□□□ -0.9
CACNB1-210ENST00000582544 TINF2Q9BSI4 451 aa9.41□□□□□ -0.9
CACNB1-210ENST00000582544 ECHDC1Q9NTX5 307 aa9.41□□□□□ -0.9
CACNB1-210ENST00000582544 RIPK3Q9Y572 518 aa9.41□□□□□ -0.9
CACNB1-210ENST00000582544 BRWD1Q9NSI6 2320 aa9.4□□□□□ -0.9
CACNB1-210ENST00000582544 TET1Q8NFU7 2136 aa9.4□□□□□ -0.9
CACNB1-210ENST00000582544 M0R2C6 588 aa9.4□□□□□ -0.9
CACNB1-210ENST00000582544 ADCY6O43306 1168 aa9.4□□□□□ -0.9
CACNB1-210ENST00000582544 SNAI1O95863 264 aaPredicted RBP9.4□□□□□ -0.9
CACNB1-210ENST00000582544 NDUFB10O96000 172 aa9.4□□□□□ -0.9
CACNB1-210ENST00000582544 PGK2P07205 417 aa9.4□□□□□ -0.9
CACNB1-210ENST00000582544 FCER1AP12319 257 aa9.4□□□□□ -0.9
CACNB1-210ENST00000582544 CNGA1P29973 690 aa9.4□□□□□ -0.9
CACNB1-210ENST00000582544 STAT3P40763 770 aa9.4□□□□□ -0.9
CACNB1-210ENST00000582544 TRIM60Q495X7 471 aa9.4□□□□□ -0.9
CACNB1-210ENST00000582544 C9orf50Q5SZB4 431 aa9.4□□□□□ -0.9
CACNB1-210ENST00000582544 ANO1Q5XXA6 986 aa9.4□□□□□ -0.9
CACNB1-210ENST00000582544 TSHZ3Q63HK5 1081 aa9.4□□□□□ -0.9
CACNB1-210ENST00000582544 ZNF467Q7Z7K2 595 aaPredicted RBP9.4□□□□□ -0.9
CACNB1-210ENST00000582544 MSL3Q8N5Y2 521 aaKnown RBP9.4□□□□□ -0.9
CACNB1-210ENST00000582544 ARRDC4Q8NCT1 418 aa9.4□□□□□ -0.9
CACNB1-210ENST00000582544 KLHDC9Q8NEP7 349 aa9.4□□□□□ -0.9
CACNB1-210ENST00000582544 PI4K2BQ8TCG2 481 aa9.4□□□□□ -0.9
CACNB1-210ENST00000582544 APPBP2Q92624 585 aa9.4□□□□□ -0.9
CACNB1-210ENST00000582544 NUP88Q99567 741 aaPredicted RBP9.4□□□□□ -0.9
CACNB1-210ENST00000582544 KATNBL1Q9H079 304 aa9.4□□□□□ -0.9
CACNB1-210ENST00000582544 CHMP4BQ9H444 224 aaKnown RBP9.4□□□□□ -0.9
CACNB1-210ENST00000582544 CWC22Q9HCG8 908 aaKnown RBP9.4□□□□□ -0.9
CACNB1-210ENST00000582544 GOPCQ9HD26 462 aa9.4□□□□□ -0.9
CACNB1-210ENST00000582544 SYNPO2Q9UMS6 1093 aa9.4□□□□□ -0.9
CACNB1-210ENST00000582544 TRIP12Q14669 1992 aaPredicted RBP9.4□□□□□ -0.9
CACNB1-210ENST00000582544 KIAA1217Q5T5P2 1943 aa9.39□□□□□ -0.91
CACNB1-210ENST00000582544 SYNGAP1Q96PV0 1343 aa9.39□□□□□ -0.91
CACNB1-210ENST00000582544 RNF113AO15541 343 aaKnown RBP9.39□□□□□ -0.91
CACNB1-210ENST00000582544 GPAA1O43292 621 aa9.39□□□□□ -0.91
CACNB1-210ENST00000582544 IGHDP01880 384 aa9.39□□□□□ -0.91
CACNB1-210ENST00000582544 COPB2P35606 906 aa9.39□□□□□ -0.91
CACNB1-210ENST00000582544 ADCYAP1R1P41586 468 aa9.39□□□□□ -0.91
CACNB1-210ENST00000582544 NOVP48745 357 aa9.39□□□□□ -0.91
CACNB1-210ENST00000582544 NKX3-2P78367 333 aa9.39□□□□□ -0.91
CACNB1-210ENST00000582544 ZSCAN25Q6NSZ9 544 aa9.39□□□□□ -0.91
CACNB1-210ENST00000582544 SLC17A8Q8NDX2 589 aa9.39□□□□□ -0.91
CACNB1-210ENST00000582544 LENG1Q96BZ8 264 aaPredicted RBP9.39□□□□□ -0.91
CACNB1-210ENST00000582544 KIF12Q96FN5 646 aa9.39□□□□□ -0.91
CACNB1-210ENST00000582544 CCDC136Q96JN2 1154 aa9.39□□□□□ -0.91
CACNB1-210ENST00000582544 MMP19Q99542 508 aa9.39□□□□□ -0.91
CACNB1-210ENST00000582544 SLF1Q9BQI6 1058 aa9.39□□□□□ -0.91
CACNB1-210ENST00000582544 SLC38A10Q9HBR0 1119 aa9.39□□□□□ -0.91
CACNB1-210ENST00000582544 SLC5A4Q9NY91 659 aa9.39□□□□□ -0.91
CACNB1-210ENST00000582544 MTMR4Q9NYA4 1195 aa9.39□□□□□ -0.91
CACNB1-210ENST00000582544 TACC3Q9Y6A5 838 aa9.39□□□□□ -0.91
CACNB1-210ENST00000582544 SCN5AQ14524 2016 aa9.39□□□□□ -0.91
CACNB1-210ENST00000582544 ZNF536O15090 1300 aa9.38□□□□□ -0.91
CACNB1-210ENST00000582544 SYNRGQ9UMZ2 1314 aa9.38□□□□□ -0.91
CACNB1-210ENST00000582544 KBTBD13C9JR72 458 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms