RNA–Protein interactions for RNA: ENST00000581416.5

ATG13-227, Transcript of autophagy related 13, humanhuman

TSL 3

Gene ATG13, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-227ENST00000581416 PLEKHM2Q8IWE5 1019 aa18.82■□□□□ 0.6
ATG13-227ENST00000581416 HELLSQ9NRZ9 838 aa18.82■□□□□ 0.6
ATG13-227ENST00000581416 ANAPC4Q9UJX5 808 aa18.82■□□□□ 0.6
ATG13-227ENST00000581416 TSPY3P0CV98 308 aa18.81■□□□□ 0.6
ATG13-227ENST00000581416 TSPY8P0CW00 308 aa18.81■□□□□ 0.6
ATG13-227ENST00000581416 SYN1P17600 705 aa18.81■□□□□ 0.6
ATG13-227ENST00000581416 NOVP48745 357 aa18.81■□□□□ 0.6
ATG13-227ENST00000581416 NUCB1Q02818 461 aa18.81■□□□□ 0.6
ATG13-227ENST00000581416 ALX1Q15699 326 aa18.81■□□□□ 0.6
ATG13-227ENST00000581416 SNRNP48Q6IEG0 339 aaKnown RBP18.81■□□□□ 0.6
ATG13-227ENST00000581416 PRPF38AQ8NAV1 312 aaKnown RBP18.81■□□□□ 0.6
ATG13-227ENST00000581416 GDF15Q99988 308 aa18.81■□□□□ 0.6
ATG13-227ENST00000581416 SLC38A10Q9HBR0 1119 aa18.81■□□□□ 0.6
ATG13-227ENST00000581416 ZNF287Q9HBT7 754 aa18.81■□□□□ 0.6
ATG13-227ENST00000581416 SYNPO2Q9UMS6 1093 aa18.81■□□□□ 0.6
ATG13-227ENST00000581416 FGRP09769 529 aa18.8■□□□□ 0.6
ATG13-227ENST00000581416 TAL1P17542 331 aaPredicted RBP18.8■□□□□ 0.6
ATG13-227ENST00000581416 SLFN13Q68D06 897 aa18.8■□□□□ 0.6
ATG13-227ENST00000581416 CHD1LQ86WJ1 897 aa18.8■□□□□ 0.6
ATG13-227ENST00000581416 CHMP4CQ96CF2 233 aa18.8■□□□□ 0.6
ATG13-227ENST00000581416 FGD4Q96M96 766 aa18.8■□□□□ 0.6
ATG13-227ENST00000581416 TEX13BQ9BXU2 312 aa18.8■□□□□ 0.6
ATG13-227ENST00000581416 ZBTB47Q9UFB7 747 aaPredicted RBP18.8■□□□□ 0.6
ATG13-227ENST00000581416 DNAJC25-GNG10A0A024R161 153 aa18.79■□□□□ 0.6
ATG13-227ENST00000581416 ATP2A1O14983 1001 aa18.79■□□□□ 0.6
ATG13-227ENST00000581416 SEPT4O43236 478 aa18.79■□□□□ 0.6
ATG13-227ENST00000581416 MSCO60682 206 aa18.79■□□□□ 0.6
ATG13-227ENST00000581416 FGAP02671 866 aa18.79■□□□□ 0.6
ATG13-227ENST00000581416 HSPD1P10809 573 aaKnown RBP18.79■□□□□ 0.6
ATG13-227ENST00000581416 MCMDC2Q4G0Z9 681 aa18.79■□□□□ 0.6
ATG13-227ENST00000581416 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.79■□□□□ 0.6
ATG13-227ENST00000581416 KIFC2Q96AC6 838 aa18.79■□□□□ 0.6
ATG13-227ENST00000581416 RWDD1Q9H446 243 aaPredicted RBP18.79■□□□□ 0.6
ATG13-227ENST00000581416 OSBPL3Q9H4L5 887 aa18.79■□□□□ 0.6
ATG13-227ENST00000581416 RAVER2Q9HCJ3 691 aaKnown RBP18.79■□□□□ 0.6
ATG13-227ENST00000581416 ZMYM6O95789 1325 aa18.78■□□□□ 0.6
ATG13-227ENST00000581416 SOX1O00570 391 aaPredicted RBP18.78■□□□□ 0.6
ATG13-227ENST00000581416 ORC4O43929 436 aa18.78■□□□□ 0.6
ATG13-227ENST00000581416 SLC3A2P08195 630 aaKnown RBP18.78■□□□□ 0.6
ATG13-227ENST00000581416 BMP3P12645 472 aa18.78■□□□□ 0.6
ATG13-227ENST00000581416 GJC2Q5T442 439 aaPredicted RBP18.78■□□□□ 0.6
ATG13-227ENST00000581416 CPXCR1Q8N123 301 aa18.78■□□□□ 0.6
ATG13-227ENST00000581416 FEM1BQ9UK73 627 aa18.78■□□□□ 0.6
ATG13-227ENST00000581416 DIS3Q9Y2L1 958 aaKnown RBP18.78■□□□□ 0.6
ATG13-227ENST00000581416 ZNF536O15090 1300 aa18.77■□□□□ 0.6
ATG13-227ENST00000581416 CCDC171Q6TFL3 1326 aa18.77■□□□□ 0.6
ATG13-227ENST00000581416 TRIM6-TRIM34B2RNG4 842 aa18.77■□□□□ 0.6
ATG13-227ENST00000581416 DNM1LO00429 736 aa18.77■□□□□ 0.6
ATG13-227ENST00000581416 ZNF865P0CJ78 1059 aaPredicted RBP18.77■□□□□ 0.6
ATG13-227ENST00000581416 COPB2P35606 906 aa18.77■□□□□ 0.6
ATG13-227ENST00000581416 KCTD2Q14681 263 aa18.77■□□□□ 0.6
ATG13-227ENST00000581416 LENG1Q96BZ8 264 aaPredicted RBP18.77■□□□□ 0.6
ATG13-227ENST00000581416 GMCL1Q96IK5 515 aa18.77■□□□□ 0.6
ATG13-227ENST00000581416 TINF2Q9BSI4 451 aa18.77■□□□□ 0.6
ATG13-227ENST00000581416 SENP6Q9GZR1 1112 aaPredicted RBP18.77■□□□□ 0.6
ATG13-227ENST00000581416 SLC5A4Q9NY91 659 aa18.77■□□□□ 0.6
ATG13-227ENST00000581416 TSPY2A6NKD2 308 aa18.76■□□□□ 0.59
ATG13-227ENST00000581416 TMEM232C9JQI7 657 aa18.76■□□□□ 0.59
ATG13-227ENST00000581416 SDSP20132 328 aa18.76■□□□□ 0.59
ATG13-227ENST00000581416 MAGEA10P43363 369 aaPredicted RBP18.76■□□□□ 0.59
ATG13-227ENST00000581416 TICAM2Q86XR7 235 aa18.76■□□□□ 0.59
ATG13-227ENST00000581416 TBC1D10CQ8IV04 446 aa18.76■□□□□ 0.59
ATG13-227ENST00000581416 RILPL2Q969X0 211 aa18.76■□□□□ 0.59
ATG13-227ENST00000581416 SUPT16HQ9Y5B9 1047 aaKnown RBP18.76■□□□□ 0.59
ATG13-227ENST00000581416 RANBP6O60518 1105 aaKnown RBP18.75■□□□□ 0.59
ATG13-227ENST00000581416 SNAI1O95863 264 aaPredicted RBP18.75■□□□□ 0.59
ATG13-227ENST00000581416 MCCP23508 829 aa18.75■□□□□ 0.59
ATG13-227ENST00000581416 BMP8BP34820 402 aa18.75■□□□□ 0.59
ATG13-227ENST00000581416 HAND2P61296 217 aa18.75■□□□□ 0.59
ATG13-227ENST00000581416 LRRC41Q15345 812 aa18.75■□□□□ 0.59
ATG13-227ENST00000581416 KCTD1Q719H9 257 aa18.75■□□□□ 0.59
ATG13-227ENST00000581416 STX8Q9UNK0 236 aa18.75■□□□□ 0.59
ATG13-227ENST00000581416 A0A1W2PPC1 479 aa18.74■□□□□ 0.59
ATG13-227ENST00000581416 ZBED4O75132 1171 aa18.74■□□□□ 0.59
ATG13-227ENST00000581416 PDE4AP27815 886 aa18.74■□□□□ 0.59
ATG13-227ENST00000581416 SLC4A3P48751 1232 aa18.74■□□□□ 0.59
ATG13-227ENST00000581416 ATN1P54259 1190 aaPredicted RBP18.74■□□□□ 0.59
ATG13-227ENST00000581416 OAZ1P54368 228 aa18.74■□□□□ 0.59
ATG13-227ENST00000581416 SNAP25P60880 206 aa18.74■□□□□ 0.59
ATG13-227ENST00000581416 IL25Q9H293 177 aa18.74■□□□□ 0.59
ATG13-227ENST00000581416 NRBP1Q9UHY1 535 aa18.74■□□□□ 0.59
ATG13-227ENST00000581416 COL6A3P12111 3177 aa18.73■□□□□ 0.59
ATG13-227ENST00000581416 ADCY6O43306 1168 aa18.73■□□□□ 0.59
ATG13-227ENST00000581416 PLA2G6O60733 806 aa18.73■□□□□ 0.59
ATG13-227ENST00000581416 SLC1A4P43007 532 aa18.73■□□□□ 0.59
ATG13-227ENST00000581416 STAT2P52630 851 aa18.73■□□□□ 0.59
ATG13-227ENST00000581416 RCSD1Q6JBY9 416 aa18.73■□□□□ 0.59
ATG13-227ENST00000581416 MAMDC4Q6UXC1 1216 aa18.73■□□□□ 0.59
ATG13-227ENST00000581416 STAG1Q8WVM7 1258 aa18.73■□□□□ 0.59
ATG13-227ENST00000581416 LRCH3Q96II8 777 aa18.73■□□□□ 0.59
ATG13-227ENST00000581416 AGBL1Q96MI9 1066 aa18.73■□□□□ 0.59
ATG13-227ENST00000581416 ASTN1O14525 1302 aa18.73■□□□□ 0.59
ATG13-227ENST00000581416 NEDD4P46934 1319 aa18.73■□□□□ 0.59
ATG13-227ENST00000581416 RTP1P59025 263 aa18.72■□□□□ 0.59
ATG13-227ENST00000581416 SNX17Q15036 470 aa18.72■□□□□ 0.59
ATG13-227ENST00000581416 RRP12Q5JTH9 1297 aaKnown RBP18.72■□□□□ 0.59
ATG13-227ENST00000581416 TTBK2Q6IQ55 1244 aa18.72■□□□□ 0.59
ATG13-227ENST00000581416 FAM160B2Q86V87 743 aa18.72■□□□□ 0.59
ATG13-227ENST00000581416 TMEM47Q9BQJ4 181 aa18.72■□□□□ 0.59
ATG13-227ENST00000581416 KATNBL1Q9H079 304 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms