RNA–Protein interactions for RNA: ENST00000581010.1

SENP3-205, Transcript of SUMO specific peptidase 3, humanhuman

Gene SENP3, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-205ENST00000581010 V9GY48 417 aaPredicted RBP8.61□□□□□ -1.03
SENP3-205ENST00000581010 CNTNAP5Q8WYK1 1306 aa8.6□□□□□ -1.03
SENP3-205ENST00000581010 USP17L5A8MUK1 530 aa8.6□□□□□ -1.03
SENP3-205ENST00000581010 PRPF3O43395 683 aaKnown RBP8.6□□□□□ -1.03
SENP3-205ENST00000581010 PPP1R12BO60237 982 aaPredicted RBP8.6□□□□□ -1.03
SENP3-205ENST00000581010 FKTNO75072 461 aa8.6□□□□□ -1.03
SENP3-205ENST00000581010 BAG4O95429 457 aaKnown RBP8.6□□□□□ -1.03
SENP3-205ENST00000581010 SLURP2P0DP57 97 aa8.6□□□□□ -1.03
SENP3-205ENST00000581010 PDHBP11177 359 aa8.6□□□□□ -1.03
SENP3-205ENST00000581010 KRT85P78386 507 aa8.6□□□□□ -1.03
SENP3-205ENST00000581010 PRKG1Q13976 671 aa8.6□□□□□ -1.03
SENP3-205ENST00000581010 NFKBIBQ15653 356 aa8.6□□□□□ -1.03
SENP3-205ENST00000581010 ZYXQ15942 572 aaKnown RBP8.6□□□□□ -1.03
SENP3-205ENST00000581010 USP17L2Q6R6M4 530 aa8.6□□□□□ -1.03
SENP3-205ENST00000581010 HEATR3Q7Z4Q2 680 aa8.6□□□□□ -1.03
SENP3-205ENST00000581010 HOMER1Q86YM7 354 aa8.6□□□□□ -1.03
SENP3-205ENST00000581010 CDAN1Q8IWY9 1227 aa8.6□□□□□ -1.03
SENP3-205ENST00000581010 CCDC148Q8NFR7 591 aa8.6□□□□□ -1.03
SENP3-205ENST00000581010 CCDC12Q8WUD4 166 aaPredicted RBP8.6□□□□□ -1.03
SENP3-205ENST00000581010 TEPSINQ96N21 525 aa8.6□□□□□ -1.03
SENP3-205ENST00000581010 ZNF396Q96N95 335 aaPredicted RBP8.6□□□□□ -1.03
SENP3-205ENST00000581010 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.6□□□□□ -1.03
SENP3-205ENST00000581010 COL25A1Q9BXS0 654 aaPredicted RBP8.6□□□□□ -1.03
SENP3-205ENST00000581010 VAT1LQ9HCJ6 419 aa8.6□□□□□ -1.03
SENP3-205ENST00000581010 FAM217BQ9NTX9 383 aaPredicted RBP8.6□□□□□ -1.03
SENP3-205ENST00000581010 MAD2L2Q9UI95 211 aa8.6□□□□□ -1.03
SENP3-205ENST00000581010 SYNPO2Q9UMS6 1093 aa8.6□□□□□ -1.03
SENP3-205ENST00000581010 CSADQ9Y600 493 aa8.6□□□□□ -1.03
SENP3-205ENST00000581010 UNC80Q8N2C7 3258 aa8.59□□□□□ -1.03
SENP3-205ENST00000581010 hCG_1642624A0A1W2PR95 340 aa8.59□□□□□ -1.03
SENP3-205ENST00000581010 PALM3A6NDB9 673 aaPredicted RBP8.59□□□□□ -1.03
SENP3-205ENST00000581010 GOLGA6L4A6NEF3 574 aa8.59□□□□□ -1.03
SENP3-205ENST00000581010 BMP3P12645 472 aa8.59□□□□□ -1.03
SENP3-205ENST00000581010 SCG2P13521 617 aa8.59□□□□□ -1.03
SENP3-205ENST00000581010 FDPSP14324 419 aaKnown RBP8.59□□□□□ -1.03
SENP3-205ENST00000581010 MCM4P33991 863 aa8.59□□□□□ -1.03
SENP3-205ENST00000581010 IREB2P48200 963 aaKnown RBP8.59□□□□□ -1.03
SENP3-205ENST00000581010 NLRP5P59047 1200 aa8.59□□□□□ -1.03
SENP3-205ENST00000581010 ZNF543Q08ER8 600 aa8.59□□□□□ -1.03
SENP3-205ENST00000581010 MKRN3Q13064 507 aaKnown RBP8.59□□□□□ -1.03
SENP3-205ENST00000581010 NTRK3Q16288 839 aa8.59□□□□□ -1.03
SENP3-205ENST00000581010 PRAMEF18Q5VWM3 479 aa8.59□□□□□ -1.03
SENP3-205ENST00000581010 KRT40Q6A162 431 aa8.59□□□□□ -1.03
SENP3-205ENST00000581010 BRAPQ7Z569 592 aa8.59□□□□□ -1.03
SENP3-205ENST00000581010 REM2Q8IYK8 340 aaPredicted RBP8.59□□□□□ -1.03
SENP3-205ENST00000581010 SCYL3Q8IZE3 742 aa8.59□□□□□ -1.03
SENP3-205ENST00000581010 STAG2Q8N3U4 1231 aa8.59□□□□□ -1.03
SENP3-205ENST00000581010 SRBD1Q8N5C6 995 aaKnown RBP8.59□□□□□ -1.03
SENP3-205ENST00000581010 RGS22Q8NE09 1264 aa8.59□□□□□ -1.03
SENP3-205ENST00000581010 GMCL1P1Q8NEA9 526 aa8.59□□□□□ -1.03
SENP3-205ENST00000581010 FBXO18Q8NFZ0 1043 aa8.59□□□□□ -1.03
SENP3-205ENST00000581010 MKL1Q969V6 931 aa8.59□□□□□ -1.03
SENP3-205ENST00000581010 SPZ1Q9BXG8 430 aa8.59□□□□□ -1.03
SENP3-205ENST00000581010 CFAP45Q9UL16 551 aa8.59□□□□□ -1.03
SENP3-205ENST00000581010 TRIM17Q9Y577 477 aa8.59□□□□□ -1.03
SENP3-205ENST00000581010 CTDP1Q9Y5B0 961 aaPredicted RBP8.59□□□□□ -1.03
SENP3-205ENST00000581010 F5H6K3 240 aa8.58□□□□□ -1.04
SENP3-205ENST00000581010 hCG_1984214I3L0E3 225 aa8.58□□□□□ -1.04
SENP3-205ENST00000581010 FIBPO43427 364 aa8.58□□□□□ -1.04
SENP3-205ENST00000581010 NDUFB10O96000 172 aa8.58□□□□□ -1.04
SENP3-205ENST00000581010 CALML3P27482 149 aa8.58□□□□□ -1.04
SENP3-205ENST00000581010 SMARCA1P28370 1054 aa8.58□□□□□ -1.04
SENP3-205ENST00000581010 KRT2P35908 639 aa8.58□□□□□ -1.04
SENP3-205ENST00000581010 NOVP48745 357 aa8.58□□□□□ -1.04
SENP3-205ENST00000581010 USP14P54578 494 aa8.58□□□□□ -1.04
SENP3-205ENST00000581010 NAPAP54920 295 aa8.58□□□□□ -1.04
SENP3-205ENST00000581010 KLRC3Q07444 240 aa8.58□□□□□ -1.04
SENP3-205ENST00000581010 PFKFB3Q16875 520 aaPredicted RBP8.58□□□□□ -1.04
SENP3-205ENST00000581010 SHROOM1Q2M3G4 852 aaPredicted RBP8.58□□□□□ -1.04
SENP3-205ENST00000581010 OTUD7BQ6GQQ9 843 aa8.58□□□□□ -1.04
SENP3-205ENST00000581010 SAMD1Q6SPF0 538 aaPredicted RBP8.58□□□□□ -1.04
SENP3-205ENST00000581010 MOB2Q70IA6 237 aa8.58□□□□□ -1.04
SENP3-205ENST00000581010 KCTD1Q719H9 257 aa8.58□□□□□ -1.04
SENP3-205ENST00000581010 NBPF11Q86T75 865 aa8.58□□□□□ -1.04
SENP3-205ENST00000581010 SPICE1Q8N0Z3 855 aa8.58□□□□□ -1.04
SENP3-205ENST00000581010 ZNF713Q8N859 430 aaPredicted RBP8.58□□□□□ -1.04
SENP3-205ENST00000581010 CDCA5Q96FF9 252 aa8.58□□□□□ -1.04
SENP3-205ENST00000581010 GMCL1Q96IK5 515 aa8.58□□□□□ -1.04
SENP3-205ENST00000581010 AIFM3Q96NN9 605 aa8.58□□□□□ -1.04
SENP3-205ENST00000581010 UBA5Q9GZZ9 404 aa8.58□□□□□ -1.04
SENP3-205ENST00000581010 VPS54Q9P1Q0 977 aa8.58□□□□□ -1.04
SENP3-205ENST00000581010 ZDHHC9Q9Y397 364 aa8.58□□□□□ -1.04
SENP3-205ENST00000581010 TCHHQ07283 1943 aa8.58□□□□□ -1.04
SENP3-205ENST00000581010 TMEM232C9JQI7 657 aa8.57□□□□□ -1.04
SENP3-205ENST00000581010 SOX1O00570 391 aaPredicted RBP8.57□□□□□ -1.04
SENP3-205ENST00000581010 MMP1P03956 469 aa8.57□□□□□ -1.04
SENP3-205ENST00000581010 INPP5BP32019 993 aa8.57□□□□□ -1.04
SENP3-205ENST00000581010 GUCY1A2P33402 732 aa8.57□□□□□ -1.04
SENP3-205ENST00000581010 STAT2P52630 851 aa8.57□□□□□ -1.04
SENP3-205ENST00000581010 MAP3K10Q02779 954 aa8.57□□□□□ -1.04
SENP3-205ENST00000581010 TRAF1Q13077 416 aa8.57□□□□□ -1.04
SENP3-205ENST00000581010 SF3A1Q15459 793 aaKnown RBP8.57□□□□□ -1.04
SENP3-205ENST00000581010 TPRNQ4KMQ1 711 aa8.57□□□□□ -1.04
SENP3-205ENST00000581010 NOM1Q5C9Z4 860 aaKnown RBP8.57□□□□□ -1.04
SENP3-205ENST00000581010 RASGRP2Q7LDG7 609 aa8.57□□□□□ -1.04
SENP3-205ENST00000581010 OTOP1Q7RTM1 612 aa8.57□□□□□ -1.04
SENP3-205ENST00000581010 ARMC9Q7Z3E5 817 aa8.57□□□□□ -1.04
SENP3-205ENST00000581010 DIS3L2Q8IYB7 885 aaKnown RBP8.57□□□□□ -1.04
SENP3-205ENST00000581010 GPKOWQ92917 476 aaPredicted RBP eCLIP8.57□□□□□ -1.04
SENP3-205ENST00000581010 LRCH3Q96II8 777 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms