RNA–Protein interactions for RNA: ENST00000580991.1

IFT20-211, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-211ENST00000580991 SSH3Q8TE77 659 aa17.78■□□□□ 0.44
IFT20-211ENST00000580991 HERVK_113Q902F9 699 aa17.78■□□□□ 0.44
IFT20-211ENST00000580991 VTI1AQ96AJ9 217 aa17.78■□□□□ 0.44
IFT20-211ENST00000580991 YTHDC1Q96MU7 727 aaKnown RBP17.78■□□□□ 0.44
IFT20-211ENST00000580991 NECAB3Q96P71 396 aaPredicted RBP17.78■□□□□ 0.44
IFT20-211ENST00000580991 CCDC8Q9H0W5 538 aaPredicted RBP17.78■□□□□ 0.44
IFT20-211ENST00000580991 NKX2-4Q9H2Z4 354 aa17.78■□□□□ 0.44
IFT20-211ENST00000580991 A0A0U1RQG5 324 aaPredicted RBP17.77■□□□□ 0.44
IFT20-211ENST00000580991 VWA5AO00534 786 aa17.77■□□□□ 0.44
IFT20-211ENST00000580991 TLR3O15455 904 aaKnown RBP17.77■□□□□ 0.44
IFT20-211ENST00000580991 C6orf222P0C671 652 aaPredicted RBP17.77■□□□□ 0.44
IFT20-211ENST00000580991 TRIM27P14373 513 aa17.77■□□□□ 0.44
IFT20-211ENST00000580991 CLEC10AQ8IUN9 316 aa17.77■□□□□ 0.44
IFT20-211ENST00000580991 PPP1R12CQ9BZL4 782 aa17.77■□□□□ 0.44
IFT20-211ENST00000580991 SPC25Q9HBM1 224 aa17.77■□□□□ 0.44
IFT20-211ENST00000580991 IL23AQ9NPF7 189 aa17.77■□□□□ 0.44
IFT20-211ENST00000580991 ZNF214Q9UL59 606 aaPredicted RBP17.77■□□□□ 0.44
IFT20-211ENST00000580991 HCN4Q9Y3Q4 1203 aa17.77■□□□□ 0.44
IFT20-211ENST00000580991 GBF1Q92538 1859 aa17.76■□□□□ 0.43
IFT20-211ENST00000580991 MYADML2A6NDP7 307 aa17.76■□□□□ 0.43
IFT20-211ENST00000580991 ARVCFO00192 962 aa17.76■□□□□ 0.43
IFT20-211ENST00000580991 ASGR1P07306 291 aa17.76■□□□□ 0.43
IFT20-211ENST00000580991 MAMDC4Q6UXC1 1216 aa17.76■□□□□ 0.43
IFT20-211ENST00000580991 FAM126BQ8IXS8 530 aa17.76■□□□□ 0.43
IFT20-211ENST00000580991 EAF2Q96CJ1 260 aaPredicted RBP17.76■□□□□ 0.43
IFT20-211ENST00000580991 DCP1AQ9NPI6 582 aaPredicted RBP17.76■□□□□ 0.43
IFT20-211ENST00000580991 FBXO28Q9NVF7 368 aa17.76■□□□□ 0.43
IFT20-211ENST00000580991 ZHX1Q9UKY1 873 aaPredicted RBP17.76■□□□□ 0.43
IFT20-211ENST00000580991 PPP1R9AQ9ULJ8 1098 aa17.76■□□□□ 0.43
IFT20-211ENST00000580991 MUC6Q6W4X9 2439 aa17.76■□□□□ 0.43
IFT20-211ENST00000580991 PRRC2BQ5JSZ5 2229 aaKnown RBP17.75■□□□□ 0.43
IFT20-211ENST00000580991 SNAI1O95863 264 aaPredicted RBP17.75■□□□□ 0.43
IFT20-211ENST00000580991 FGBP02675 491 aa17.75■□□□□ 0.43
IFT20-211ENST00000580991 AKR1B1P15121 316 aa17.75■□□□□ 0.43
IFT20-211ENST00000580991 ATP8B2P98198 1209 aa17.75■□□□□ 0.43
IFT20-211ENST00000580991 TFF2Q03403 129 aa17.75■□□□□ 0.43
IFT20-211ENST00000580991 CCDC17Q96LX7 622 aa17.75■□□□□ 0.43
IFT20-211ENST00000580991 YBX2Q9Y2T7 364 aaKnown RBP17.75■□□□□ 0.43
IFT20-211ENST00000580991 NOP58Q9Y2X3 529 aaKnown RBP17.75■□□□□ 0.43
IFT20-211ENST00000580991 BCAR3O75815 825 aa17.74■□□□□ 0.43
IFT20-211ENST00000580991 CYP2C18P33260 490 aa17.74■□□□□ 0.43
IFT20-211ENST00000580991 SLC9C2Q5TAH2 1124 aa17.74■□□□□ 0.43
IFT20-211ENST00000580991 MICALL1Q8N3F8 863 aa17.74■□□□□ 0.43
IFT20-211ENST00000580991 REPS2Q8NFH8 660 aa17.74■□□□□ 0.43
IFT20-211ENST00000580991 SDR42E1Q8WUS8 393 aa17.74■□□□□ 0.43
IFT20-211ENST00000580991 DDX11Q96FC9 970 aa17.74■□□□□ 0.43
IFT20-211ENST00000580991 UPF3AQ9H1J1 476 aaKnown RBP17.74■□□□□ 0.43
IFT20-211ENST00000580991 GOPCQ9HD26 462 aa17.74■□□□□ 0.43
IFT20-211ENST00000580991 CD4P01730 458 aa17.73■□□□□ 0.43
IFT20-211ENST00000580991 CYP2D6P10635 497 aa17.73■□□□□ 0.43
IFT20-211ENST00000580991 GJA9P57773 515 aa17.73■□□□□ 0.43
IFT20-211ENST00000580991 IRX5P78411 483 aaPredicted RBP17.73■□□□□ 0.43
IFT20-211ENST00000580991 ACVR2BQ13705 512 aa17.73■□□□□ 0.43
IFT20-211ENST00000580991 TTF1Q15361 905 aaPredicted RBP17.73■□□□□ 0.43
IFT20-211ENST00000580991 GNASQ5JWF2 1037 aa17.73■□□□□ 0.43
IFT20-211ENST00000580991 PPP2R2DQ66LE6 453 aa17.73■□□□□ 0.43
IFT20-211ENST00000580991 ZNF467Q7Z7K2 595 aaPredicted RBP17.73■□□□□ 0.43
IFT20-211ENST00000580991 CLUAP1Q96AJ1 413 aa17.73■□□□□ 0.43
IFT20-211ENST00000580991 DYNLL2Q96FJ2 89 aa17.73■□□□□ 0.43
IFT20-211ENST00000580991 LRFN3Q9BTN0 628 aa17.73■□□□□ 0.43
IFT20-211ENST00000580991 TEX13BQ9BXU2 312 aa17.73■□□□□ 0.43
IFT20-211ENST00000580991 DNAJC25-GNG10A0A024R161 153 aa17.72■□□□□ 0.43
IFT20-211ENST00000580991 ERC2O15083 957 aa17.72■□□□□ 0.43
IFT20-211ENST00000580991 EEF2P13639 858 aaKnown RBP17.72■□□□□ 0.43
IFT20-211ENST00000580991 PDE6AP16499 860 aa17.72■□□□□ 0.43
IFT20-211ENST00000580991 KCNQ1P51787 676 aa17.72■□□□□ 0.43
IFT20-211ENST00000580991 SKIV2LQ15477 1246 aaKnown RBP17.72■□□□□ 0.43
IFT20-211ENST00000580991 CCDC144BQ3MJ40 725 aa17.72■□□□□ 0.43
IFT20-211ENST00000580991 OTOP2Q7RTS6 562 aa17.72■□□□□ 0.43
IFT20-211ENST00000580991 FRAT1Q92837 279 aaPredicted RBP17.72■□□□□ 0.43
IFT20-211ENST00000580991 ABHD16BQ9H3Z7 469 aa17.72■□□□□ 0.43
IFT20-211ENST00000580991 KANSL2Q9H9L4 492 aa17.72■□□□□ 0.43
IFT20-211ENST00000580991 TNNQ9UQP3 1299 aa17.72■□□□□ 0.43
IFT20-211ENST00000580991 ADCY6O43306 1168 aa17.71■□□□□ 0.43
IFT20-211ENST00000580991 SNRNP48Q6IEG0 339 aaKnown RBP17.71■□□□□ 0.43
IFT20-211ENST00000580991 HIPK3Q9H422 1215 aa17.71■□□□□ 0.43
IFT20-211ENST00000580991 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.71■□□□□ 0.43
IFT20-211ENST00000580991 MCM3APO60318 1980 aa17.71■□□□□ 0.43
IFT20-211ENST00000580991 ZNF532Q9HCE3 1301 aa17.71■□□□□ 0.42
IFT20-211ENST00000580991 RAD21O60216 631 aa17.7■□□□□ 0.42
IFT20-211ENST00000580991 CDK8P49336 464 aa17.7■□□□□ 0.42
IFT20-211ENST00000580991 TMEM31Q5JXX7 168 aa17.7■□□□□ 0.42
IFT20-211ENST00000580991 FAM83BQ5T0W9 1011 aa17.7■□□□□ 0.42
IFT20-211ENST00000580991 LCORLQ8N3X6 602 aa17.7■□□□□ 0.42
IFT20-211ENST00000580991 EPHX3Q9H6B9 360 aa17.7■□□□□ 0.42
IFT20-211ENST00000580991 PCDHA11Q9Y5I1 949 aa17.7■□□□□ 0.42
IFT20-211ENST00000580991 SLC4A7Q9Y6M7 1214 aa17.7■□□□□ 0.42
IFT20-211ENST00000580991 POU3F3P20264 500 aaPredicted RBP17.69■□□□□ 0.42
IFT20-211ENST00000580991 RABGGTBP53611 331 aa17.69■□□□□ 0.42
IFT20-211ENST00000580991 AMOTL1Q8IY63 956 aa17.69■□□□□ 0.42
IFT20-211ENST00000580991 RPUSD2Q8IZ73 545 aaKnown RBP17.69■□□□□ 0.42
IFT20-211ENST00000580991 TMEM57Q8N5G2 664 aa17.69■□□□□ 0.42
IFT20-211ENST00000580991 SLC43A3Q8NBI5 491 aa17.69■□□□□ 0.42
IFT20-211ENST00000580991 SLF1Q9BQI6 1058 aa17.69■□□□□ 0.42
IFT20-211ENST00000580991 ATP8A2Q9NTI2 1148 aa17.69■□□□□ 0.42
IFT20-211ENST00000580991 BAZ2AQ9UIF9 1905 aaKnown RBP17.68■□□□□ 0.42
IFT20-211ENST00000580991 TCRBV5S4A2TA0A5A2 114 aa17.68■□□□□ 0.42
IFT20-211ENST00000580991 CTAGE5O15320 804 aa17.68■□□□□ 0.42
IFT20-211ENST00000580991 GTPBP6O43824 516 aaPredicted RBP17.68■□□□□ 0.42
IFT20-211ENST00000580991 NKX3-2P78367 333 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms