RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 FRMPD2Q68DX3 1309 aaPredicted RBP16.59■□□□□ 0.25
SKA2-205ENST00000580541 NID2Q14112 1375 aa16.59■□□□□ 0.25
SKA2-205ENST00000580541 PTPRFP10586 1907 aa16.58■□□□□ 0.25
SKA2-205ENST00000580541 BTBD19C9JJ37 291 aa16.58■□□□□ 0.24
SKA2-205ENST00000580541 K7ELQ4 463 aaPredicted RBP16.58■□□□□ 0.24
SKA2-205ENST00000580541 PDHXO00330 501 aa16.58■□□□□ 0.24
SKA2-205ENST00000580541 ZBED4O75132 1171 aa16.58■□□□□ 0.24
SKA2-205ENST00000580541 GOLGA8HP0CJ92 632 aa16.58■□□□□ 0.24
SKA2-205ENST00000580541 RXRAP19793 462 aa16.58■□□□□ 0.24
SKA2-205ENST00000580541 VEGFBP49765 207 aa16.58■□□□□ 0.24
SKA2-205ENST00000580541 KIAA1755Q5JYT7 1200 aa16.58■□□□□ 0.24
SKA2-205ENST00000580541 SYDE2Q5VT97 1194 aa16.58■□□□□ 0.24
SKA2-205ENST00000580541 IFNL1Q8IU54 200 aa16.58■□□□□ 0.24
SKA2-205ENST00000580541 TMX3Q96JJ7 454 aa16.58■□□□□ 0.24
SKA2-205ENST00000580541 PARK7Q99497 189 aaKnown RBP16.58■□□□□ 0.24
SKA2-205ENST00000580541 NUP88Q99567 741 aaPredicted RBP16.58■□□□□ 0.24
SKA2-205ENST00000580541 LLPHQ9BRT6 129 aaKnown RBP16.58■□□□□ 0.24
SKA2-205ENST00000580541 DAXXQ9UER7 740 aaPredicted RBP16.58■□□□□ 0.24
SKA2-205ENST00000580541 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.58■□□□□ 0.24
SKA2-205ENST00000580541 HSP90AA1P07900 732 aaKnown RBP16.57■□□□□ 0.24
SKA2-205ENST00000580541 DSG3P32926 999 aa16.57■□□□□ 0.24
SKA2-205ENST00000580541 ADD1P35611 737 aaKnown RBP16.57■□□□□ 0.24
SKA2-205ENST00000580541 GCLCP48506 637 aaPredicted RBP16.57■□□□□ 0.24
SKA2-205ENST00000580541 SSRP1Q08945 709 aaKnown RBP16.57■□□□□ 0.24
SKA2-205ENST00000580541 MOGSQ13724 837 aa16.57■□□□□ 0.24
SKA2-205ENST00000580541 TREML2Q5T2D2 321 aa16.57■□□□□ 0.24
SKA2-205ENST00000580541 GPAT2Q6NUI2 795 aa16.57■□□□□ 0.24
SKA2-205ENST00000580541 TMTC3Q6ZXV5 915 aa16.57■□□□□ 0.24
SKA2-205ENST00000580541 STAG2Q8N3U4 1231 aa16.57■□□□□ 0.24
SKA2-205ENST00000580541 SMCR8Q8TEV9 937 aaPredicted RBP16.57■□□□□ 0.24
SKA2-205ENST00000580541 GTF3C6Q969F1 213 aa16.57■□□□□ 0.24
SKA2-205ENST00000580541 KIFC2Q96AC6 838 aa16.57■□□□□ 0.24
SKA2-205ENST00000580541 RRP36Q96EU6 259 aaKnown RBP16.57■□□□□ 0.24
SKA2-205ENST00000580541 SPZ1Q9BXG8 430 aa16.57■□□□□ 0.24
SKA2-205ENST00000580541 ASCC2Q9H1I8 757 aaPredicted RBP16.57■□□□□ 0.24
SKA2-205ENST00000580541 SEC63Q9UGP8 760 aaKnown RBP16.57■□□□□ 0.24
SKA2-205ENST00000580541 PPP1R9AQ9ULJ8 1098 aa16.57■□□□□ 0.24
SKA2-205ENST00000580541 KIF3AQ9Y496 699 aa16.57■□□□□ 0.24
SKA2-205ENST00000580541 IFNAR1P17181 557 aa16.56■□□□□ 0.24
SKA2-205ENST00000580541 SCRN1Q12765 414 aa16.56■□□□□ 0.24
SKA2-205ENST00000580541 RAB11FIP4Q86YS3 637 aa16.56■□□□□ 0.24
SKA2-205ENST00000580541 WASF1Q92558 559 aa16.56■□□□□ 0.24
SKA2-205ENST00000580541 UBA5Q9GZZ9 404 aa16.56■□□□□ 0.24
SKA2-205ENST00000580541 RIOX1Q9H6W3 641 aa16.56■□□□□ 0.24
SKA2-205ENST00000580541 ZFYVE28Q9HCC9 887 aa16.56■□□□□ 0.24
SKA2-205ENST00000580541 VAT1LQ9HCJ6 419 aa16.56■□□□□ 0.24
SKA2-205ENST00000580541 PRR12Q9ULL5 1215 aa16.56■□□□□ 0.24
SKA2-205ENST00000580541 CDC27P30260 824 aa16.55■□□□□ 0.24
SKA2-205ENST00000580541 SLC16A2P36021 539 aa16.55■□□□□ 0.24
SKA2-205ENST00000580541 HMGN5P82970 282 aaKnown RBP16.55■□□□□ 0.24
SKA2-205ENST00000580541 DGKZQ13574 1117 aa16.55■□□□□ 0.24
SKA2-205ENST00000580541 TTBK2Q6IQ55 1244 aa16.55■□□□□ 0.24
SKA2-205ENST00000580541 SAMD1Q6SPF0 538 aaPredicted RBP16.55■□□□□ 0.24
SKA2-205ENST00000580541 LBX2Q6XYB7 198 aa16.55■□□□□ 0.24
SKA2-205ENST00000580541 ADGRF4Q8IZF3 695 aa16.55■□□□□ 0.24
SKA2-205ENST00000580541 SRBD1Q8N5C6 995 aaKnown RBP16.55■□□□□ 0.24
SKA2-205ENST00000580541 NECAB1Q8N987 351 aa16.55■□□□□ 0.24
SKA2-205ENST00000580541 P2RX7Q99572 595 aaKnown RBP16.55■□□□□ 0.24
SKA2-205ENST00000580541 PTPN18Q99952 460 aa16.55■□□□□ 0.24
SKA2-205ENST00000580541 BEGAINQ9BUH8 593 aa16.55■□□□□ 0.24
SKA2-205ENST00000580541 RNF26Q9BY78 433 aaPredicted RBP16.55■□□□□ 0.24
SKA2-205ENST00000580541 FAM217BQ9NTX9 383 aaPredicted RBP16.55■□□□□ 0.24
SKA2-205ENST00000580541 LOC285556D6RIA3 1793 aa16.54■□□□□ 0.24
SKA2-205ENST00000580541 PNMA6FA0A0J9YX94 578 aa16.54■□□□□ 0.24
SKA2-205ENST00000580541 PRPF3O43395 683 aaKnown RBP16.54■□□□□ 0.24
SKA2-205ENST00000580541 AOC2O75106 756 aa16.54■□□□□ 0.24
SKA2-205ENST00000580541 CD2BP2O95400 341 aaKnown RBP16.54■□□□□ 0.24
SKA2-205ENST00000580541 OAZ1P54368 228 aa16.54■□□□□ 0.24
SKA2-205ENST00000580541 HERVK_113P62684 666 aa16.54■□□□□ 0.24
SKA2-205ENST00000580541 MAP2K1Q02750 393 aaPredicted RBP16.54■□□□□ 0.24
SKA2-205ENST00000580541 TAF1CQ15572 869 aaPredicted RBP16.54■□□□□ 0.24
SKA2-205ENST00000580541 CCDC83Q8IWF9 413 aa16.54■□□□□ 0.24
SKA2-205ENST00000580541 FAM43AQ8N2R8 423 aa16.54■□□□□ 0.24
SKA2-205ENST00000580541 CCDC82Q8N4S0 544 aa16.54■□□□□ 0.24
SKA2-205ENST00000580541 INTS4Q96HW7 963 aaKnown RBP16.54■□□□□ 0.24
SKA2-205ENST00000580541 NCOA5Q9HCD5 579 aaKnown RBP16.54■□□□□ 0.24
SKA2-205ENST00000580541 ADAMTS5Q9UNA0 930 aa16.54■□□□□ 0.24
SKA2-205ENST00000580541 V9GY48 417 aaPredicted RBP16.54■□□□□ 0.24
SKA2-205ENST00000580541 VWA5AO00534 786 aa16.53■□□□□ 0.24
SKA2-205ENST00000580541 ZBTB5O15062 677 aa16.53■□□□□ 0.24
SKA2-205ENST00000580541 CA12O43570 354 aa16.53■□□□□ 0.24
SKA2-205ENST00000580541 PLEKHA8P1O95397 391 aa16.53■□□□□ 0.24
SKA2-205ENST00000580541 XBP1P17861 261 aa16.53■□□□□ 0.24
SKA2-205ENST00000580541 COPB2P35606 906 aa16.53■□□□□ 0.24
SKA2-205ENST00000580541 CCNA1P78396 465 aa16.53■□□□□ 0.24
SKA2-205ENST00000580541 HTRA3P83110 453 aa16.53■□□□□ 0.24
SKA2-205ENST00000580541 JMJD4Q9H9V9 463 aa16.53■□□□□ 0.24
SKA2-205ENST00000580541 SLC38A10Q9HBR0 1119 aa16.53■□□□□ 0.24
SKA2-205ENST00000580541 TSHZ2Q9NRE2 1034 aa16.53■□□□□ 0.24
SKA2-205ENST00000580541 FBXO28Q9NVF7 368 aa16.53■□□□□ 0.24
SKA2-205ENST00000580541 RABGAP1Q9Y3P9 1069 aa16.53■□□□□ 0.24
SKA2-205ENST00000580541 RBM19Q9Y4C8 960 aaKnown RBP16.53■□□□□ 0.24
SKA2-205ENST00000580541 SPDYE16A6NNV3 312 aaPredicted RBP16.52■□□□□ 0.24
SKA2-205ENST00000580541 hCG_1984214I3L0E3 225 aa16.52■□□□□ 0.24
SKA2-205ENST00000580541 IGF2BP3O00425 579 aaKnown RBP eCLIP16.52■□□□□ 0.24
SKA2-205ENST00000580541 DEXIO95424 95 aa16.52■□□□□ 0.24
SKA2-205ENST00000580541 LARGE1O95461 756 aa16.52■□□□□ 0.24
SKA2-205ENST00000580541 FMNL1O95466 1100 aaPredicted RBP16.52■□□□□ 0.24
SKA2-205ENST00000580541 CUL4AQ13619 759 aa16.52■□□□□ 0.24
SKA2-205ENST00000580541 NTRK3Q16288 839 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms