RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 TMEM232C9JQI7 657 aa13.11□□□□□ -0.31
CDK5RAP3-210ENST00000578733 CPLX1O14810 134 aa13.11□□□□□ -0.31
CDK5RAP3-210ENST00000578733 CDKL5O76039 1030 aa13.11□□□□□ -0.31
CDK5RAP3-210ENST00000578733 TM4SF4P48230 202 aa13.11□□□□□ -0.31
CDK5RAP3-210ENST00000578733 COL9A3Q14050 684 aaPredicted RBP13.11□□□□□ -0.31
CDK5RAP3-210ENST00000578733 COG2Q14746 738 aa13.11□□□□□ -0.31
CDK5RAP3-210ENST00000578733 TREML2Q5T2D2 321 aa13.11□□□□□ -0.31
CDK5RAP3-210ENST00000578733 CATSPERGQ6ZRH7 1159 aa13.11□□□□□ -0.31
CDK5RAP3-210ENST00000578733 KCTD1Q719H9 257 aa13.11□□□□□ -0.31
CDK5RAP3-210ENST00000578733 HSCBQ8IWL3 235 aa13.11□□□□□ -0.31
CDK5RAP3-210ENST00000578733 FANCBQ8NB91 859 aa13.11□□□□□ -0.31
CDK5RAP3-210ENST00000578733 SLF1Q9BQI6 1058 aa13.11□□□□□ -0.31
CDK5RAP3-210ENST00000578733 MYL10Q9BUA6 226 aa13.11□□□□□ -0.31
CDK5RAP3-210ENST00000578733 SENP2Q9HC62 589 aa13.11□□□□□ -0.31
CDK5RAP3-210ENST00000578733 BRPF3Q9ULD4 1205 aa13.11□□□□□ -0.31
CDK5RAP3-210ENST00000578733 FRMPD2Q68DX3 1309 aaPredicted RBP13.11□□□□□ -0.31
CDK5RAP3-210ENST00000578733 MGAMO43451 1857 aa13.1□□□□□ -0.31
CDK5RAP3-210ENST00000578733 PALM3A6NDB9 673 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP3-210ENST00000578733 PDHXO00330 501 aa13.1□□□□□ -0.31
CDK5RAP3-210ENST00000578733 SMARCA1P28370 1054 aa13.1□□□□□ -0.31
CDK5RAP3-210ENST00000578733 PDIA3P30101 505 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-210ENST00000578733 IFNL1Q8IU54 200 aa13.1□□□□□ -0.31
CDK5RAP3-210ENST00000578733 CCDC144CPQ8IYA2 1237 aa13.1□□□□□ -0.31
CDK5RAP3-210ENST00000578733 PRPF38AQ8NAV1 312 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-210ENST00000578733 SMCR8Q8TEV9 937 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP3-210ENST00000578733 NUP88Q99567 741 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP3-210ENST00000578733 GPCPD1Q9NPB8 672 aa13.1□□□□□ -0.31
CDK5RAP3-210ENST00000578733 RBM27Q9P2N5 1060 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-210ENST00000578733 MAD2L2Q9UI95 211 aa13.1□□□□□ -0.31
CDK5RAP3-210ENST00000578733 PNMA2Q9UL42 364 aa13.1□□□□□ -0.31
CDK5RAP3-210ENST00000578733 BTBD19C9JJ37 291 aa13.09□□□□□ -0.31
CDK5RAP3-210ENST00000578733 KLRF2D3W0D1 207 aa13.09□□□□□ -0.31
CDK5RAP3-210ENST00000578733 PFKFB2O60825 505 aa13.09□□□□□ -0.31
CDK5RAP3-210ENST00000578733 ZBED4O75132 1171 aa13.09□□□□□ -0.31
CDK5RAP3-210ENST00000578733 GOLGA8HP0CJ92 632 aa13.09□□□□□ -0.31
CDK5RAP3-210ENST00000578733 RXRAP19793 462 aa13.09□□□□□ -0.31
CDK5RAP3-210ENST00000578733 GCLCP48506 637 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP3-210ENST00000578733 CCT2P78371 535 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-210ENST00000578733 AKAP17AQ02040 695 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-210ENST00000578733 TRAF1Q13077 416 aa13.09□□□□□ -0.31
CDK5RAP3-210ENST00000578733 STK3Q13188 491 aa13.09□□□□□ -0.31
CDK5RAP3-210ENST00000578733 MOGSQ13724 837 aa13.09□□□□□ -0.31
CDK5RAP3-210ENST00000578733 BECN1Q14457 450 aa13.09□□□□□ -0.31
CDK5RAP3-210ENST00000578733 TAF1CQ15572 869 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP3-210ENST00000578733 SYDE2Q5VT97 1194 aa13.09□□□□□ -0.31
CDK5RAP3-210ENST00000578733 GPAT2Q6NUI2 795 aa13.09□□□□□ -0.31
CDK5RAP3-210ENST00000578733 SAMD1Q6SPF0 538 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP3-210ENST00000578733 BTNL9Q6UXG8 535 aa13.09□□□□□ -0.31
CDK5RAP3-210ENST00000578733 TRIM22Q8IYM9 498 aa13.09□□□□□ -0.31
CDK5RAP3-210ENST00000578733 MB21D1Q8N884 522 aa13.09□□□□□ -0.31
CDK5RAP3-210ENST00000578733 SNX21Q969T3 373 aa13.09□□□□□ -0.31
CDK5RAP3-210ENST00000578733 KIFC2Q96AC6 838 aa13.09□□□□□ -0.31
CDK5RAP3-210ENST00000578733 ZFYVE28Q9HCC9 887 aa13.09□□□□□ -0.31
CDK5RAP3-210ENST00000578733 SEC63Q9UGP8 760 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-210ENST00000578733 PPP1R9AQ9ULJ8 1098 aa13.09□□□□□ -0.31
CDK5RAP3-210ENST00000578733 TPCN1Q9ULQ1 816 aa13.09□□□□□ -0.31
CDK5RAP3-210ENST00000578733 ZNFX1Q9P2E3 1918 aaKnown RBP13.08□□□□□ -0.32
CDK5RAP3-210ENST00000578733 DSG3P32926 999 aa13.08□□□□□ -0.32
CDK5RAP3-210ENST00000578733 ANP32AP39687 249 aaKnown RBP13.08□□□□□ -0.32
CDK5RAP3-210ENST00000578733 SOX10P56693 466 aa13.08□□□□□ -0.32
CDK5RAP3-210ENST00000578733 KIAA1755Q5JYT7 1200 aa13.08□□□□□ -0.32
CDK5RAP3-210ENST00000578733 TMTC3Q6ZXV5 915 aa13.08□□□□□ -0.32
CDK5RAP3-210ENST00000578733 RAB11FIP4Q86YS3 637 aa13.08□□□□□ -0.32
CDK5RAP3-210ENST00000578733 FAM43AQ8N2R8 423 aa13.08□□□□□ -0.32
CDK5RAP3-210ENST00000578733 GTF3C6Q969F1 213 aa13.08□□□□□ -0.32
CDK5RAP3-210ENST00000578733 ASCC2Q9H1I8 757 aaPredicted RBP13.08□□□□□ -0.32
CDK5RAP3-210ENST00000578733 PLXNB2O15031 1838 aa13.07□□□□□ -0.32
CDK5RAP3-210ENST00000578733 IGF2BP3O00425 579 aaKnown RBP eCLIP13.07□□□□□ -0.32
CDK5RAP3-210ENST00000578733 HERVK_113P62684 666 aa13.07□□□□□ -0.32
CDK5RAP3-210ENST00000578733 ME3Q16798 604 aa13.07□□□□□ -0.32
CDK5RAP3-210ENST00000578733 LBX2Q6XYB7 198 aa13.07□□□□□ -0.32
CDK5RAP3-210ENST00000578733 RRP36Q96EU6 259 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP3-210ENST00000578733 PTPN18Q99952 460 aa13.07□□□□□ -0.32
CDK5RAP3-210ENST00000578733 LARP6Q9BRS8 491 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP3-210ENST00000578733 SPZ1Q9BXG8 430 aa13.07□□□□□ -0.32
CDK5RAP3-210ENST00000578733 PRR12Q9ULL5 1215 aa13.07□□□□□ -0.32
CDK5RAP3-210ENST00000578733 HPS5Q9UPZ3 1129 aa13.07□□□□□ -0.32
CDK5RAP3-210ENST00000578733 KIF3AQ9Y496 699 aa13.07□□□□□ -0.32
CDK5RAP3-210ENST00000578733 SPDYE16A6NNV3 312 aaPredicted RBP13.06□□□□□ -0.32
CDK5RAP3-210ENST00000578733 K7ELQ4 463 aaPredicted RBP13.06□□□□□ -0.32
CDK5RAP3-210ENST00000578733 COPB2P35606 906 aa13.06□□□□□ -0.32
CDK5RAP3-210ENST00000578733 OAZ1P54368 228 aa13.06□□□□□ -0.32
CDK5RAP3-210ENST00000578733 SSRP1Q08945 709 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-210ENST00000578733 SCRN1Q12765 414 aa13.06□□□□□ -0.32
CDK5RAP3-210ENST00000578733 TTBK2Q6IQ55 1244 aa13.06□□□□□ -0.32
CDK5RAP3-210ENST00000578733 RASGRP2Q7LDG7 609 aa13.06□□□□□ -0.32
CDK5RAP3-210ENST00000578733 CTU1Q7Z7A3 348 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-210ENST00000578733 ADGRF4Q8IZF3 695 aa13.06□□□□□ -0.32
CDK5RAP3-210ENST00000578733 STAG2Q8N3U4 1231 aa13.06□□□□□ -0.32
CDK5RAP3-210ENST00000578733 TMX3Q96JJ7 454 aa13.06□□□□□ -0.32
CDK5RAP3-210ENST00000578733 ZIC5Q96T25 663 aa13.06□□□□□ -0.32
CDK5RAP3-210ENST00000578733 P2RX7Q99572 595 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-210ENST00000578733 UBA5Q9GZZ9 404 aa13.06□□□□□ -0.32
CDK5RAP3-210ENST00000578733 VAT1LQ9HCJ6 419 aa13.06□□□□□ -0.32
CDK5RAP3-210ENST00000578733 TSHZ2Q9NRE2 1034 aa13.06□□□□□ -0.32
CDK5RAP3-210ENST00000578733 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.06□□□□□ -0.32
CDK5RAP3-210ENST00000578733 SMCHD1A6NHR9 2005 aa13.05□□□□□ -0.32
CDK5RAP3-210ENST00000578733 hCG_1984214I3L0E3 225 aa13.05□□□□□ -0.32
CDK5RAP3-210ENST00000578733 VWA5AO00534 786 aa13.05□□□□□ -0.32
CDK5RAP3-210ENST00000578733 PLEKHA8P1O95397 391 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms