RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 FBXL16Q8N461 479 aa11.76□□□□□ -0.53
CRLF3-202ENST00000577725 CRACR2BQ8N4Y2 399 aaPredicted RBP11.76□□□□□ -0.53
CRLF3-202ENST00000577725 ATXN2LQ8WWM7 1075 aaKnown RBP11.76□□□□□ -0.53
CRLF3-202ENST00000577725 CHMP4CQ96CF2 233 aa11.76□□□□□ -0.53
CRLF3-202ENST00000577725 UHRF1Q96T88 793 aaPredicted RBP11.76□□□□□ -0.53
CRLF3-202ENST00000577725 TMEM39BQ9GZU3 492 aa11.76□□□□□ -0.53
CRLF3-202ENST00000577725 DNAJC18Q9H819 358 aa11.76□□□□□ -0.53
CRLF3-202ENST00000577725 SERPINB13Q9UIV8 391 aa11.76□□□□□ -0.53
CRLF3-202ENST00000577725 SMC3Q9UQE7 1217 aa11.76□□□□□ -0.53
CRLF3-202ENST00000577725 GOLGA8AA7E2F4 631 aa11.75□□□□□ -0.53
CRLF3-202ENST00000577725 CTDNEP1O95476 244 aa11.75□□□□□ -0.53
CRLF3-202ENST00000577725 TSPY3P0CV98 308 aa11.75□□□□□ -0.53
CRLF3-202ENST00000577725 TSPY8P0CW00 308 aa11.75□□□□□ -0.53
CRLF3-202ENST00000577725 GJB2P29033 226 aa11.75□□□□□ -0.53
CRLF3-202ENST00000577725 FOXD4L5Q5VV16 416 aaPredicted RBP11.75□□□□□ -0.53
CRLF3-202ENST00000577725 APOA5Q6Q788 366 aa11.75□□□□□ -0.53
CRLF3-202ENST00000577725 CLEC10AQ8IUN9 316 aa11.75□□□□□ -0.53
CRLF3-202ENST00000577725 USP38Q8NB14 1042 aa11.75□□□□□ -0.53
CRLF3-202ENST00000577725 NUP133Q8WUM0 1156 aa11.75□□□□□ -0.53
CRLF3-202ENST00000577725 FAM151AQ8WW52 585 aa11.75□□□□□ -0.53
CRLF3-202ENST00000577725 FOXD4L4Q8WXT5 416 aaPredicted RBP11.75□□□□□ -0.53
CRLF3-202ENST00000577725 ZNF274Q96GC6 653 aaPredicted RBP11.75□□□□□ -0.53
CRLF3-202ENST00000577725 INTS4Q96HW7 963 aaKnown RBP11.75□□□□□ -0.53
CRLF3-202ENST00000577725 TRIM34Q9BYJ4 488 aa11.75□□□□□ -0.53
CRLF3-202ENST00000577725 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.75□□□□□ -0.53
CRLF3-202ENST00000577725 TTYH1Q9H313 450 aaPredicted RBP11.75□□□□□ -0.53
CRLF3-202ENST00000577725 IL17RBQ9NRM6 502 aa11.75□□□□□ -0.53
CRLF3-202ENST00000577725 CHMP5Q9NZZ3 219 aa11.75□□□□□ -0.53
CRLF3-202ENST00000577725 ZBTB43O43298 467 aa11.74□□□□□ -0.53
CRLF3-202ENST00000577725 LIFRP42702 1097 aa11.74□□□□□ -0.53
CRLF3-202ENST00000577725 FLT3LGP49771 235 aa11.74□□□□□ -0.53
CRLF3-202ENST00000577725 METAP2P50579 478 aaKnown RBP eCLIP11.74□□□□□ -0.53
CRLF3-202ENST00000577725 EVCP57679 992 aa11.74□□□□□ -0.53
CRLF3-202ENST00000577725 PKP1Q13835 747 aa11.74□□□□□ -0.53
CRLF3-202ENST00000577725 IFIT1BQ5T764 474 aaKnown RBP11.74□□□□□ -0.53
CRLF3-202ENST00000577725 SGMS1Q86VZ5 419 aa11.74□□□□□ -0.53
CRLF3-202ENST00000577725 IQCA1Q86XH1 822 aa11.74□□□□□ -0.53
CRLF3-202ENST00000577725 ZNF654Q8IZM8 581 aa11.74□□□□□ -0.53
CRLF3-202ENST00000577725 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.74□□□□□ -0.53
CRLF3-202ENST00000577725 NEDD1Q8NHV4 660 aa11.74□□□□□ -0.53
CRLF3-202ENST00000577725 DDX11Q96FC9 970 aa11.74□□□□□ -0.53
CRLF3-202ENST00000577725 ASB2Q96Q27 587 aa11.74□□□□□ -0.53
CRLF3-202ENST00000577725 P2RX7Q99572 595 aaKnown RBP11.74□□□□□ -0.53
CRLF3-202ENST00000577725 LBHD1Q9BQE6 289 aaPredicted RBP11.74□□□□□ -0.53
CRLF3-202ENST00000577725 EHD4Q9H223 541 aa11.74□□□□□ -0.53
CRLF3-202ENST00000577725 DHX36Q9H2U1 1008 aaKnown RBP11.74□□□□□ -0.53
CRLF3-202ENST00000577725 ZNF287Q9HBT7 754 aa11.74□□□□□ -0.53
CRLF3-202ENST00000577725 PI4KBQ9UBF8 816 aa11.74□□□□□ -0.53
CRLF3-202ENST00000577725 SWAP70Q9UH65 585 aa11.74□□□□□ -0.53
CRLF3-202ENST00000577725 MTMR7Q9Y216 660 aa11.74□□□□□ -0.53
CRLF3-202ENST00000577725 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.74□□□□□ -0.53
CRLF3-202ENST00000577725 SLC12A7Q9Y666 1083 aa11.74□□□□□ -0.53
CRLF3-202ENST00000577725 ATRNL1Q5VV63 1379 aa11.74□□□□□ -0.53
CRLF3-202ENST00000577725 PTPDC1A2A3K4 754 aa11.73□□□□□ -0.53
CRLF3-202ENST00000577725 MPHOSPH10O00566 681 aaKnown RBP11.73□□□□□ -0.53
CRLF3-202ENST00000577725 GDF11O95390 407 aa11.73□□□□□ -0.53
CRLF3-202ENST00000577725 CDC27P30260 824 aa11.73□□□□□ -0.53
CRLF3-202ENST00000577725 IRF5Q13568 498 aa11.73□□□□□ -0.53
CRLF3-202ENST00000577725 TNFAIP1Q13829 316 aa11.73□□□□□ -0.53
CRLF3-202ENST00000577725 RRP1BQ14684 758 aaKnown RBP11.73□□□□□ -0.53
CRLF3-202ENST00000577725 RCSD1Q6JBY9 416 aa11.73□□□□□ -0.53
CRLF3-202ENST00000577725 ANKRD23Q86SG2 305 aa11.73□□□□□ -0.53
CRLF3-202ENST00000577725 ERO1BQ86YB8 467 aa11.73□□□□□ -0.53
CRLF3-202ENST00000577725 NSUN7Q8NE18 718 aaKnown RBP11.73□□□□□ -0.53
CRLF3-202ENST00000577725 SPOCK2Q92563 424 aa11.73□□□□□ -0.53
CRLF3-202ENST00000577725 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.73□□□□□ -0.53
CRLF3-202ENST00000577725 OTOFQ9HC10 1997 aa11.72□□□□□ -0.53
CRLF3-202ENST00000577725 GREB1LQ9C091 1923 aaPredicted RBP11.72□□□□□ -0.53
CRLF3-202ENST00000577725 PDHXO00330 501 aa11.72□□□□□ -0.53
CRLF3-202ENST00000577725 IRF6O14896 467 aa11.72□□□□□ -0.53
CRLF3-202ENST00000577725 ADD1P35611 737 aaKnown RBP11.72□□□□□ -0.53
CRLF3-202ENST00000577725 JAG1P78504 1218 aa11.72□□□□□ -0.53
CRLF3-202ENST00000577725 SMAD3P84022 425 aaKnown RBP11.72□□□□□ -0.53
CRLF3-202ENST00000577725 RTN1Q16799 776 aa11.72□□□□□ -0.53
CRLF3-202ENST00000577725 FKBP1CQ5VVH2 108 aa11.72□□□□□ -0.53
CRLF3-202ENST00000577725 SYNE3Q6ZMZ3 975 aa11.72□□□□□ -0.53
CRLF3-202ENST00000577725 MIGA2Q7L4E1 593 aa11.72□□□□□ -0.53
CRLF3-202ENST00000577725 RASGRP2Q7LDG7 609 aa11.72□□□□□ -0.53
CRLF3-202ENST00000577725 FAM83AQ86UY5 434 aa11.72□□□□□ -0.53
CRLF3-202ENST00000577725 CEP95Q96GE4 821 aa11.72□□□□□ -0.53
CRLF3-202ENST00000577725 MTA3Q9BTC8 594 aa11.72□□□□□ -0.53
CRLF3-202ENST00000577725 LRFN3Q9BTN0 628 aa11.72□□□□□ -0.53
CRLF3-202ENST00000577725 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.72□□□□□ -0.53
CRLF3-202ENST00000577725 CWC22Q9HCG8 908 aaKnown RBP11.72□□□□□ -0.53
CRLF3-202ENST00000577725 FAM217BQ9NTX9 383 aaPredicted RBP11.72□□□□□ -0.53
CRLF3-202ENST00000577725 CIZ1Q9ULV3 898 aaPredicted RBP11.72□□□□□ -0.53
CRLF3-202ENST00000577725 PLIN4Q96Q06 1357 aa11.71□□□□□ -0.53
CRLF3-202ENST00000577725 PFASO15067 1338 aa11.71□□□□□ -0.53
CRLF3-202ENST00000577725 MYH4Q9Y623 1939 aa11.71□□□□□ -0.53
CRLF3-202ENST00000577725 IGKV6D-41A0A0C4DH26 115 aa11.71□□□□□ -0.53
CRLF3-202ENST00000577725 BCRP11274 1271 aa11.71□□□□□ -0.53
CRLF3-202ENST00000577725 TNNI2P48788 182 aa11.71□□□□□ -0.53
CRLF3-202ENST00000577725 ATP2B2Q01814 1243 aa11.71□□□□□ -0.53
CRLF3-202ENST00000577725 PPIL2Q13356 520 aa11.71□□□□□ -0.53
CRLF3-202ENST00000577725 CERKLQ49MI3 558 aaPredicted RBP11.71□□□□□ -0.53
CRLF3-202ENST00000577725 CATIPQ7Z7H3 387 aa11.71□□□□□ -0.53
CRLF3-202ENST00000577725 FOXP4Q8IVH2 680 aaPredicted RBP11.71□□□□□ -0.53
CRLF3-202ENST00000577725 CMTR1Q8N1G2 835 aaKnown RBP11.71□□□□□ -0.53
CRLF3-202ENST00000577725 LRRC47Q8N1G4 583 aaKnown RBP11.71□□□□□ -0.53
CRLF3-202ENST00000577725 TMEM47Q9BQJ4 181 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms