RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 ITPRIPQ8IWB1 547 aa12.21□□□□□ -0.45
NPLOC4-220ENST00000576940 DDX11Q96FC9 970 aa12.21□□□□□ -0.45
NPLOC4-220ENST00000576940 GLT1D1Q96MS3 346 aa12.21□□□□□ -0.45
NPLOC4-220ENST00000576940 DNAJC2Q99543 621 aaKnown RBP12.21□□□□□ -0.45
NPLOC4-220ENST00000576940 PPP1R12CQ9BZL4 782 aa12.21□□□□□ -0.45
NPLOC4-220ENST00000576940 ZHX1Q9UKY1 873 aaPredicted RBP12.21□□□□□ -0.45
NPLOC4-220ENST00000576940 PPP1R9AQ9ULJ8 1098 aa12.21□□□□□ -0.45
NPLOC4-220ENST00000576940 NAV1Q8NEY1 1877 aa12.21□□□□□ -0.46
NPLOC4-220ENST00000576940 PLXNA1Q9UIW2 1896 aa12.21□□□□□ -0.46
NPLOC4-220ENST00000576940 USP17L12C9JPN9 530 aa12.2□□□□□ -0.46
NPLOC4-220ENST00000576940 USP17L21D6R901 530 aa12.2□□□□□ -0.46
NPLOC4-220ENST00000576940 ADCY6O43306 1168 aa12.2□□□□□ -0.46
NPLOC4-220ENST00000576940 DUSP11O75319 330 aaKnown RBP12.2□□□□□ -0.46
NPLOC4-220ENST00000576940 ASGR1P07306 291 aa12.2□□□□□ -0.46
NPLOC4-220ENST00000576940 C6orf222P0C671 652 aaPredicted RBP12.2□□□□□ -0.46
NPLOC4-220ENST00000576940 RLBP1P12271 317 aa12.2□□□□□ -0.46
NPLOC4-220ENST00000576940 PPIGQ13427 754 aaKnown RBP eCLIP12.2□□□□□ -0.462e-11■■□□□ 13
NPLOC4-220ENST00000576940 AKNAD1Q5T1N1 836 aa12.2□□□□□ -0.46
NPLOC4-220ENST00000576940 C12orf60Q5U649 245 aa12.2□□□□□ -0.46
NPLOC4-220ENST00000576940 CEP85Q6P2H3 762 aa12.2□□□□□ -0.46
NPLOC4-220ENST00000576940 RHPN1Q8TCX5 695 aa12.2□□□□□ -0.46
NPLOC4-220ENST00000576940 ADAMTS19Q8TE59 1207 aa12.2□□□□□ -0.46
NPLOC4-220ENST00000576940 CCDC17Q96LX7 622 aa12.2□□□□□ -0.46
NPLOC4-220ENST00000576940 NUP88Q99567 741 aaPredicted RBP12.2□□□□□ -0.46
NPLOC4-220ENST00000576940 KANSL2Q9H9L4 492 aa12.2□□□□□ -0.46
NPLOC4-220ENST00000576940 THEGQ9P2T0 379 aa12.2□□□□□ -0.46
NPLOC4-220ENST00000576940 ELP1O95163 1332 aa12.19□□□□□ -0.46
NPLOC4-220ENST00000576940 PARP14Q460N5 1801 aa12.19□□□□□ -0.46
NPLOC4-220ENST00000576940 XIRP2A4UGR9 3374 aa12.19□□□□□ -0.46
NPLOC4-220ENST00000576940 ARVCFO00192 962 aa12.19□□□□□ -0.46
NPLOC4-220ENST00000576940 APBB1O00213 710 aa12.19□□□□□ -0.46
NPLOC4-220ENST00000576940 MBD4O95243 580 aa12.19□□□□□ -0.46
NPLOC4-220ENST00000576940 CYP2C18P33260 490 aa12.19□□□□□ -0.46
NPLOC4-220ENST00000576940 MRPS5P82675 430 aaKnown RBP12.19□□□□□ -0.46
NPLOC4-220ENST00000576940 ACVR2BQ13705 512 aa12.19□□□□□ -0.46
NPLOC4-220ENST00000576940 SNRNP48Q6IEG0 339 aaKnown RBP12.19□□□□□ -0.46
NPLOC4-220ENST00000576940 MAMDC4Q6UXC1 1216 aa12.19□□□□□ -0.46
NPLOC4-220ENST00000576940 ERC1Q8IUD2 1116 aa12.19□□□□□ -0.46
NPLOC4-220ENST00000576940 CPXCR1Q8N123 301 aa12.19□□□□□ -0.46
NPLOC4-220ENST00000576940 TMEM199Q8N511 208 aa12.19□□□□□ -0.46
NPLOC4-220ENST00000576940 UHRF1Q96T88 793 aaPredicted RBP12.19□□□□□ -0.46
NPLOC4-220ENST00000576940 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.19□□□□□ -0.46
NPLOC4-220ENST00000576940 ATP8A2Q9NTI2 1148 aa12.19□□□□□ -0.46
NPLOC4-220ENST00000576940 CXXC1Q9P0U4 656 aaPredicted RBP12.19□□□□□ -0.46
NPLOC4-220ENST00000576940 ROBO3Q96MS0 1386 aa12.18□□□□□ -0.46
NPLOC4-220ENST00000576940 SYNGAP1Q96PV0 1343 aa12.18□□□□□ -0.46
NPLOC4-220ENST00000576940 DNAJC25-GNG10A0A024R161 153 aa12.18□□□□□ -0.46
NPLOC4-220ENST00000576940 ADD2P35612 726 aa12.18□□□□□ -0.46
NPLOC4-220ENST00000576940 CCDC144BQ3MJ40 725 aa12.18□□□□□ -0.46
NPLOC4-220ENST00000576940 GNASQ5JWF2 1037 aa12.18□□□□□ -0.46
NPLOC4-220ENST00000576940 C16orf86Q6ZW13 317 aa12.18□□□□□ -0.46
NPLOC4-220ENST00000576940 FAM126BQ8IXS8 530 aa12.18□□□□□ -0.46
NPLOC4-220ENST00000576940 FTSJ3Q8IY81 847 aaKnown RBP12.18□□□□□ -0.46
NPLOC4-220ENST00000576940 STK11IPQ8N1F8 1099 aa12.18□□□□□ -0.46
NPLOC4-220ENST00000576940 MSL3Q8N5Y2 521 aaKnown RBP12.18□□□□□ -0.46
NPLOC4-220ENST00000576940 PCSK9Q8NBP7 692 aaKnown RBP12.18□□□□□ -0.46
NPLOC4-220ENST00000576940 NECAB3Q96P71 396 aaPredicted RBP12.18□□□□□ -0.46
NPLOC4-220ENST00000576940 NKX2-4Q9H2Z4 354 aa12.18□□□□□ -0.46
NPLOC4-220ENST00000576940 BOLA2Q9H3K6 86 aa12.18□□□□□ -0.46
NPLOC4-220ENST00000576940 GOPCQ9HD26 462 aa12.18□□□□□ -0.46
NPLOC4-220ENST00000576940 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.18□□□□□ -0.46
NPLOC4-220ENST00000576940 MSRAQ9UJ68 235 aa12.18□□□□□ -0.46
NPLOC4-220ENST00000576940 BAZ2AQ9UIF9 1905 aaKnown RBP12.17□□□□□ -0.46
NPLOC4-220ENST00000576940 MROH7Q68CQ1 1323 aa12.17□□□□□ -0.46
NPLOC4-220ENST00000576940 A0A0U1RQG5 324 aaPredicted RBP12.17□□□□□ -0.46
NPLOC4-220ENST00000576940 CTAGE5O15320 804 aa12.17□□□□□ -0.46
NPLOC4-220ENST00000576940 FGBP02675 491 aa12.17□□□□□ -0.46
NPLOC4-220ENST00000576940 CST5P28325 142 aaPredicted RBP12.17□□□□□ -0.46
NPLOC4-220ENST00000576940 COPB2P35606 906 aa12.17□□□□□ -0.46
NPLOC4-220ENST00000576940 GJA9P57773 515 aa12.17□□□□□ -0.46
NPLOC4-220ENST00000576940 BEX3Q00994 111 aa12.17□□□□□ -0.46
NPLOC4-220ENST00000576940 CTR9Q6PD62 1173 aa12.17□□□□□ -0.46
NPLOC4-220ENST00000576940 CCDC174Q6PII3 467 aa12.17□□□□□ -0.46
NPLOC4-220ENST00000576940 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.17□□□□□ -0.46
NPLOC4-220ENST00000576940 FGD4Q96M96 766 aa12.17□□□□□ -0.46
NPLOC4-220ENST00000576940 SLF1Q9BQI6 1058 aa12.17□□□□□ -0.46
NPLOC4-220ENST00000576940 TEX13BQ9BXU2 312 aa12.17□□□□□ -0.46
NPLOC4-220ENST00000576940 IL23AQ9NPF7 189 aa12.17□□□□□ -0.46
NPLOC4-220ENST00000576940 YBX2Q9Y2T7 364 aaKnown RBP12.17□□□□□ -0.46
NPLOC4-220ENST00000576940 SLC4A4Q9Y6R1 1079 aa12.17□□□□□ -0.46
NPLOC4-220ENST00000576940 CHD9Q3L8U1 2897 aa12.17□□□□□ -0.46
NPLOC4-220ENST00000576940 UMODL1Q5DID0 1318 aa12.16□□□□□ -0.46
NPLOC4-220ENST00000576940 TCF20Q9UGU0 1960 aaKnown RBP12.16□□□□□ -0.46
NPLOC4-220ENST00000576940 MYH8P13535 1937 aa12.16□□□□□ -0.46
NPLOC4-220ENST00000576940 F5H6K3 240 aa12.16□□□□□ -0.46
NPLOC4-220ENST00000576940 CD4P01730 458 aa12.16□□□□□ -0.46
NPLOC4-220ENST00000576940 IFIT2P09913 472 aaKnown RBP12.16□□□□□ -0.46
NPLOC4-220ENST00000576940 MYOGP15173 224 aa12.16□□□□□ -0.46
NPLOC4-220ENST00000576940 RABGGTBP53611 331 aa12.16□□□□□ -0.46
NPLOC4-220ENST00000576940 KLRC3Q07444 240 aa12.16□□□□□ -0.46
NPLOC4-220ENST00000576940 RAB30Q15771 203 aa12.16□□□□□ -0.46
NPLOC4-220ENST00000576940 PSRC1Q6PGN9 363 aaPredicted RBP12.16□□□□□ -0.46
NPLOC4-220ENST00000576940 OTOP2Q7RTS6 562 aa12.16□□□□□ -0.46
NPLOC4-220ENST00000576940 ANKRD35Q8N283 1001 aa12.16□□□□□ -0.46
NPLOC4-220ENST00000576940 CLASRPQ8N2M8 674 aaKnown RBP12.16□□□□□ -0.46
NPLOC4-220ENST00000576940 HERVK_113Q902F9 699 aa12.16□□□□□ -0.46
NPLOC4-220ENST00000576940 ABHD16BQ9H3Z7 469 aa12.16□□□□□ -0.46
NPLOC4-220ENST00000576940 SLC28A3Q9HAS3 691 aa12.16□□□□□ -0.46
NPLOC4-220ENST00000576940 SPC25Q9HBM1 224 aa12.16□□□□□ -0.46
NPLOC4-220ENST00000576940 RAVER2Q9HCJ3 691 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms