RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 CLP1Q92989 425 aaKnown RBP7.73□□□□□ -1.17
NUP88-212ENST00000576708 WRNIP1Q96S55 665 aa7.73□□□□□ -1.17
NUP88-212ENST00000576708 MRIQ9BWK5 157 aa7.73□□□□□ -1.17
NUP88-212ENST00000576708 NIFKQ9BYG3 293 aaKnown RBP7.73□□□□□ -1.17
NUP88-212ENST00000576708 API5Q9BZZ5 524 aaKnown RBP7.73□□□□□ -1.17
NUP88-212ENST00000576708 TMOD2Q9NZR1 351 aa7.73□□□□□ -1.17
NUP88-212ENST00000576708 ZNF232Q9UNY5 417 aa7.73□□□□□ -1.17
NUP88-212ENST00000576708 USTQ9Y2C2 406 aa7.73□□□□□ -1.17
NUP88-212ENST00000576708 PTPN22Q9Y2R2 807 aa7.73□□□□□ -1.17
NUP88-212ENST00000576708 DAGLAQ9Y4D2 1042 aa7.73□□□□□ -1.17
NUP88-212ENST00000576708 CSADQ9Y600 493 aa7.73□□□□□ -1.17
NUP88-212ENST00000576708 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.73□□□□□ -1.17
NUP88-212ENST00000576708 KIF16BQ96L93 1317 aa7.73□□□□□ -1.17
NUP88-212ENST00000576708 BCAR3O75815 825 aa7.72□□□□□ -1.17
NUP88-212ENST00000576708 CIAO1O76071 339 aa7.72□□□□□ -1.17
NUP88-212ENST00000576708 WEE1P30291 646 aa7.72□□□□□ -1.17
NUP88-212ENST00000576708 IL15P40933 162 aaPredicted RBP7.72□□□□□ -1.17
NUP88-212ENST00000576708 SP3Q02447 781 aa7.72□□□□□ -1.17
NUP88-212ENST00000576708 PTSQ03393 145 aa7.72□□□□□ -1.17
NUP88-212ENST00000576708 TAF1CQ15572 869 aaPredicted RBP7.72□□□□□ -1.17
NUP88-212ENST00000576708 OCLNQ16625 522 aa7.72□□□□□ -1.17
NUP88-212ENST00000576708 FAM83AQ86UY5 434 aa7.72□□□□□ -1.17
NUP88-212ENST00000576708 ERO1AQ96HE7 468 aa7.72□□□□□ -1.17
NUP88-212ENST00000576708 MKNK1Q9BUB5 465 aa7.72□□□□□ -1.17
NUP88-212ENST00000576708 EFCC1Q9HA90 598 aa7.72□□□□□ -1.17
NUP88-212ENST00000576708 USP40Q9NVE5 1235 aa7.72□□□□□ -1.17
NUP88-212ENST00000576708 SUGT1Q9Y2Z0 365 aa7.72□□□□□ -1.17
NUP88-212ENST00000576708 MAST3O60307 1309 aa7.72□□□□□ -1.17
NUP88-212ENST00000576708 LAMB1P07942 1786 aa7.71□□□□□ -1.17
NUP88-212ENST00000576708 SERTM1A2A2V5 107 aa7.71□□□□□ -1.18
NUP88-212ENST00000576708 BTBD19C9JJ37 291 aa7.71□□□□□ -1.18
NUP88-212ENST00000576708 CCER2I3L3R5 266 aa7.71□□□□□ -1.18
NUP88-212ENST00000576708 LDHBP07195 334 aaKnown RBP7.71□□□□□ -1.18
NUP88-212ENST00000576708 IGFBP4P22692 258 aa7.71□□□□□ -1.18
NUP88-212ENST00000576708 NOS2P35228 1153 aa7.71□□□□□ -1.18
NUP88-212ENST00000576708 GTF2A2P52657 109 aa7.71□□□□□ -1.18
NUP88-212ENST00000576708 PSMA6P60900 246 aaKnown RBP7.71□□□□□ -1.18
NUP88-212ENST00000576708 TFCP2Q12800 502 aa7.71□□□□□ -1.18
NUP88-212ENST00000576708 TEAD4Q15561 434 aa7.71□□□□□ -1.18
NUP88-212ENST00000576708 FKBP1CQ5VVH2 108 aa7.71□□□□□ -1.18
NUP88-212ENST00000576708 ERO1BQ86YB8 467 aa7.71□□□□□ -1.18
NUP88-212ENST00000576708 FAM151AQ8WW52 585 aa7.71□□□□□ -1.18
NUP88-212ENST00000576708 GAS2L1Q99501 681 aaPredicted RBP7.71□□□□□ -1.18
NUP88-212ENST00000576708 ZNF341Q9BYN7 854 aa7.71□□□□□ -1.18
NUP88-212ENST00000576708 ARHGAP39Q9C0H5 1083 aa7.71□□□□□ -1.18
NUP88-212ENST00000576708 ZFYVE28Q9HCC9 887 aa7.71□□□□□ -1.18
NUP88-212ENST00000576708 TIMMDC1Q9NPL8 285 aa7.71□□□□□ -1.18
NUP88-212ENST00000576708 COPRSQ9NQ92 184 aa7.71□□□□□ -1.18
NUP88-212ENST00000576708 CXXC1Q9P0U4 656 aaPredicted RBP7.71□□□□□ -1.18
NUP88-212ENST00000576708 HCN4Q9Y3Q4 1203 aa7.71□□□□□ -1.18
NUP88-212ENST00000576708 SRGAP3O43295 1099 aa7.7□□□□□ -1.18
NUP88-212ENST00000576708 CT47B1P0C2W7 299 aaPredicted RBP7.7□□□□□ -1.18
NUP88-212ENST00000576708 CETPP11597 493 aa7.7□□□□□ -1.18
NUP88-212ENST00000576708 EN2P19622 333 aaPredicted RBP7.7□□□□□ -1.18
NUP88-212ENST00000576708 TXLNAP40222 546 aa7.7□□□□□ -1.18
NUP88-212ENST00000576708 PPIL2Q13356 520 aa7.7□□□□□ -1.18
NUP88-212ENST00000576708 RASGRF1Q13972 1273 aa7.7□□□□□ -1.18
NUP88-212ENST00000576708 DCAF15Q66K64 600 aa7.7□□□□□ -1.18
NUP88-212ENST00000576708 INTS3Q68E01 1043 aaKnown RBP7.7□□□□□ -1.18
NUP88-212ENST00000576708 TREML4Q6UXN2 200 aa7.7□□□□□ -1.18
NUP88-212ENST00000576708 CAPN12Q6ZSI9 719 aa7.7□□□□□ -1.18
NUP88-212ENST00000576708 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.7□□□□□ -1.18
NUP88-212ENST00000576708 FRAT1Q92837 279 aaPredicted RBP7.7□□□□□ -1.18
NUP88-212ENST00000576708 GPAMQ9HCL2 828 aa7.7□□□□□ -1.18
NUP88-212ENST00000576708 GNL3LQ9NVN8 582 aaKnown RBP7.7□□□□□ -1.18
NUP88-212ENST00000576708 ABCF2Q9UG63 623 aa7.7□□□□□ -1.18
NUP88-212ENST00000576708 DENND2AQ9ULE3 1009 aa7.7□□□□□ -1.18
NUP88-212ENST00000576708 PTCH2Q9Y6C5 1203 aa7.7□□□□□ -1.18
NUP88-212ENST00000576708 ZSWIM8A7E2V4 1837 aa7.7□□□□□ -1.18
NUP88-212ENST00000576708 SALL1Q9NSC2 1324 aa7.7□□□□□ -1.18
NUP88-212ENST00000576708 MYH13Q9UKX3 1938 aa7.7□□□□□ -1.18
NUP88-212ENST00000576708 PNMA6EA0A0J9YXQ4 647 aa7.69□□□□□ -1.18
NUP88-212ENST00000576708 A0A1B0GUL7 405 aa7.69□□□□□ -1.18
NUP88-212ENST00000576708 EML1O00423 815 aa7.69□□□□□ -1.18
NUP88-212ENST00000576708 TRIM27P14373 513 aa7.69□□□□□ -1.18
NUP88-212ENST00000576708 CTGFP29279 349 aa7.69□□□□□ -1.18
NUP88-212ENST00000576708 RGS3P49796 1198 aa7.69□□□□□ -1.18
NUP88-212ENST00000576708 SNAPC2Q13487 334 aa7.69□□□□□ -1.18
NUP88-212ENST00000576708 MOGSQ13724 837 aa7.69□□□□□ -1.18
NUP88-212ENST00000576708 PHLDB3Q6NSJ2 640 aa7.69□□□□□ -1.18
NUP88-212ENST00000576708 PI16Q6UXB8 463 aa7.69□□□□□ -1.18
NUP88-212ENST00000576708 ZNF384Q8TF68 577 aa7.69□□□□□ -1.18
NUP88-212ENST00000576708 ARHGAP45Q92619 1136 aa7.69□□□□□ -1.18
NUP88-212ENST00000576708 NEUROD6Q96NK8 337 aa7.69□□□□□ -1.18
NUP88-212ENST00000576708 C2orf49Q9BVC5 232 aaPredicted RBP7.69□□□□□ -1.18
NUP88-212ENST00000576708 DDX4Q9NQI0 724 aaKnown RBP7.69□□□□□ -1.18
NUP88-212ENST00000576708 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.69□□□□□ -1.18
NUP88-212ENST00000576708 CPA4Q9UI42 421 aa7.69□□□□□ -1.18
NUP88-212ENST00000576708 ZNF112Q9UJU3 913 aa7.69□□□□□ -1.18
NUP88-212ENST00000576708 RPAP1Q9BWH6 1393 aaPredicted RBP7.69□□□□□ -1.18
NUP88-212ENST00000576708 SLC35F4A4IF30 521 aa7.68□□□□□ -1.18
NUP88-212ENST00000576708 DDTLA6NHG4 134 aaPredicted RBP7.68□□□□□ -1.18
NUP88-212ENST00000576708 PHF20L1A8MW92 1017 aa7.68□□□□□ -1.18
NUP88-212ENST00000576708 PDHXO00330 501 aa7.68□□□□□ -1.18
NUP88-212ENST00000576708 TLR2O60603 784 aa7.68□□□□□ -1.18
NUP88-212ENST00000576708 WDHD1O75717 1129 aaPredicted RBP7.68□□□□□ -1.18
NUP88-212ENST00000576708 GNAI3P08754 354 aa7.68□□□□□ -1.18
NUP88-212ENST00000576708 BTDP43251 543 aa7.68□□□□□ -1.18
NUP88-212ENST00000576708 PPATQ06203 517 aa7.68□□□□□ -1.18
NUP88-212ENST00000576708 PICALMQ13492 652 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms