RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 SENP2Q9HC62 589 aa19.84■□□□□ 0.77
ATPAF1-214ENST00000576409 GPR108Q9NPR9 543 aa19.84■□□□□ 0.77
ATPAF1-214ENST00000576409 CFAP74Q9C0B2 1584 aa19.84■□□□□ 0.77
ATPAF1-214ENST00000576409 MROH5Q6ZUA9 1318 aa19.84■□□□□ 0.77
ATPAF1-214ENST00000576409 FAM205CA6NFA0 338 aa19.84■□□□□ 0.77
ATPAF1-214ENST00000576409 TADA3O75528 432 aa19.84■□□□□ 0.77
ATPAF1-214ENST00000576409 FDPSP14324 419 aaKnown RBP19.84■□□□□ 0.77
ATPAF1-214ENST00000576409 PTPREP23469 700 aa19.84■□□□□ 0.77
ATPAF1-214ENST00000576409 HOOK3Q86VS8 718 aa19.84■□□□□ 0.77
ATPAF1-214ENST00000576409 REXO1Q8N1G1 1221 aaKnown RBP19.84■□□□□ 0.77
ATPAF1-214ENST00000576409 TMOD2Q9NZR1 351 aa19.84■□□□□ 0.77
ATPAF1-214ENST00000576409 H7C1W4 665 aa19.84■□□□□ 0.77
ATPAF1-214ENST00000576409 EEF2P13639 858 aaKnown RBP19.84■□□□□ 0.77
ATPAF1-214ENST00000576409 PEX26Q7Z412 305 aa19.84■□□□□ 0.77
ATPAF1-214ENST00000576409 LSM14BQ9BX40 385 aaKnown RBP19.84■□□□□ 0.77
ATPAF1-214ENST00000576409 SRPRBQ9Y5M8 271 aaKnown RBP19.84■□□□□ 0.77
ATPAF1-214ENST00000576409 NEDD4P46934 1319 aa19.84■□□□□ 0.77
ATPAF1-214ENST00000576409 FMR1Q06787 632 aaKnown RBP eCLIP19.84■□□□□ 0.77
ATPAF1-214ENST00000576409 CHRNDQ07001 517 aa19.84■□□□□ 0.77
ATPAF1-214ENST00000576409 CUL4BQ13620 913 aa19.84■□□□□ 0.77
ATPAF1-214ENST00000576409 STRBPQ96SI9 672 aaKnown RBP19.84■□□□□ 0.77
ATPAF1-214ENST00000576409 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.84■□□□□ 0.77
ATPAF1-214ENST00000576409 KLRF2D3W0D1 207 aa19.83■□□□□ 0.77
ATPAF1-214ENST00000576409 MFAP3LO75121 409 aa19.83■□□□□ 0.77
ATPAF1-214ENST00000576409 SP4Q02446 784 aa19.83■□□□□ 0.77
ATPAF1-214ENST00000576409 PPP1R7Q15435 360 aa19.83■□□□□ 0.77
ATPAF1-214ENST00000576409 ARHGAP44Q17R89 818 aa19.83■□□□□ 0.77
ATPAF1-214ENST00000576409 KRT12Q99456 494 aa19.83■□□□□ 0.77
ATPAF1-214ENST00000576409 SPHKAPQ2M3C7 1700 aa19.83■□□□□ 0.76
ATPAF1-214ENST00000576409 MOCS3O95396 460 aa19.83■□□□□ 0.76
ATPAF1-214ENST00000576409 CTNNA1P35221 906 aaKnown RBP19.83■□□□□ 0.76
ATPAF1-214ENST00000576409 GIGYF2Q6Y7W6 1299 aaKnown RBP19.83■□□□□ 0.76
ATPAF1-214ENST00000576409 CCDC50Q8IVM0 306 aa19.83■□□□□ 0.76
ATPAF1-214ENST00000576409 SAMD15Q9P1V8 674 aa19.83■□□□□ 0.76
ATPAF1-214ENST00000576409 MLH3Q9UHC1 1453 aa19.83■□□□□ 0.76
ATPAF1-214ENST00000576409 FRMPD2Q68DX3 1309 aaPredicted RBP19.83■□□□□ 0.76
ATPAF1-214ENST00000576409 CROCC2H7BZ55 1655 aa19.83■□□□□ 0.76
ATPAF1-214ENST00000576409 POTEJP0CG39 1038 aa19.83■□□□□ 0.76
ATPAF1-214ENST00000576409 ST3GAL1Q11201 340 aa19.83■□□□□ 0.76
ATPAF1-214ENST00000576409 MB21D2Q8IYB1 491 aaPredicted RBP19.83■□□□□ 0.76
ATPAF1-214ENST00000576409 EPB41L5Q9HCM4 733 aa19.83■□□□□ 0.76
ATPAF1-214ENST00000576409 ADGRG1Q9Y653 693 aa19.83■□□□□ 0.76
ATPAF1-214ENST00000576409 ZNF609O15014 1411 aa19.82■□□□□ 0.76
ATPAF1-214ENST00000576409 FTCDO95954 541 aa19.82■□□□□ 0.76
ATPAF1-214ENST00000576409 EXOSC10Q01780 885 aaKnown RBP19.82■□□□□ 0.76
ATPAF1-214ENST00000576409 IFT88Q13099 833 aa19.82■□□□□ 0.76
ATPAF1-214ENST00000576409 HLFQ16534 295 aa19.82■□□□□ 0.76
ATPAF1-214ENST00000576409 CCDC91Q7Z6B0 441 aa19.82■□□□□ 0.76
ATPAF1-214ENST00000576409 HYOU1Q9Y4L1 999 aa19.82■□□□□ 0.76
ATPAF1-214ENST00000576409 QRICH2Q9H0J4 1663 aa19.82■□□□□ 0.76
ATPAF1-214ENST00000576409 ATP8B1O43520 1251 aa19.82■□□□□ 0.76
ATPAF1-214ENST00000576409 IRX5P78411 483 aaPredicted RBP19.82■□□□□ 0.76
ATPAF1-214ENST00000576409 TNIP1Q15025 636 aa19.82■□□□□ 0.76
ATPAF1-214ENST00000576409 LRRN4CLQ8ND94 238 aa19.82■□□□□ 0.76
ATPAF1-214ENST00000576409 CCDC26Q8TAB7 109 aa19.82■□□□□ 0.76
ATPAF1-214ENST00000576409 ATP6V0A2Q9Y487 856 aa19.82■□□□□ 0.76
ATPAF1-214ENST00000576409 PPP2R5BQ15173 497 aa19.82■□□□□ 0.76
ATPAF1-214ENST00000576409 CCDC174Q6PII3 467 aa19.82■□□□□ 0.76
ATPAF1-214ENST00000576409 GSTA5Q7RTV2 222 aa19.82■□□□□ 0.76
ATPAF1-214ENST00000576409 TACO1Q9BSH4 297 aaKnown RBP19.82■□□□□ 0.76
ATPAF1-214ENST00000576409 RIN2Q8WYP3 895 aaPredicted RBP19.81■□□□□ 0.76
ATPAF1-214ENST00000576409 RNF26Q9BY78 433 aaPredicted RBP19.81■□□□□ 0.76
ATPAF1-214ENST00000576409 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.81■□□□□ 0.76
ATPAF1-214ENST00000576409 MRPL12P52815 198 aaKnown RBP19.81■□□□□ 0.76
ATPAF1-214ENST00000576409 RASAL2Q9UJF2 1139 aa19.81■□□□□ 0.76
ATPAF1-214ENST00000576409 SPOPO43791 374 aa19.81■□□□□ 0.76
ATPAF1-214ENST00000576409 CIAO1O76071 339 aa19.81■□□□□ 0.76
ATPAF1-214ENST00000576409 GRIN1Q05586 938 aa19.81■□□□□ 0.76
ATPAF1-214ENST00000576409 MRPL44Q9H9J2 332 aaKnown RBP19.81■□□□□ 0.76
ATPAF1-214ENST00000576409 TTLL11Q8NHH1 800 aa19.8■□□□□ 0.76
ATPAF1-214ENST00000576409 VPS41P49754 854 aa19.8■□□□□ 0.76
ATPAF1-214ENST00000576409 VSNL1P62760 191 aa19.8■□□□□ 0.76
ATPAF1-214ENST00000576409 BICD1Q96G01 975 aa19.8■□□□□ 0.76
ATPAF1-214ENST00000576409 BAZ2BQ9UIF8 2168 aaKnown RBP19.8■□□□□ 0.76
ATPAF1-214ENST00000576409 TNFAIP3P21580 790 aa19.8■□□□□ 0.76
ATPAF1-214ENST00000576409 CALCOCO2Q13137 446 aa19.8■□□□□ 0.76
ATPAF1-214ENST00000576409 CCDC6Q16204 474 aa19.8■□□□□ 0.76
ATPAF1-214ENST00000576409 USH1GQ495M9 461 aa19.8■□□□□ 0.76
ATPAF1-214ENST00000576409 U2AF1L4Q8WU68 220 aaKnown RBP19.8■□□□□ 0.76
ATPAF1-214ENST00000576409 ARHGEF40Q8TER5 1519 aa19.8■□□□□ 0.76
ATPAF1-214ENST00000576409 UBN2Q6ZU65 1347 aa19.8■□□□□ 0.76
ATPAF1-214ENST00000576409 PP2D1A8MPX8 630 aa19.8■□□□□ 0.76
ATPAF1-214ENST00000576409 GNPATO15228 680 aa19.8■□□□□ 0.76
ATPAF1-214ENST00000576409 NMT2O60551 498 aa19.8■□□□□ 0.76
ATPAF1-214ENST00000576409 STXBP4Q6ZWJ1 553 aa19.8■□□□□ 0.76
ATPAF1-214ENST00000576409 KRT25Q7Z3Z0 450 aa19.8■□□□□ 0.76
ATPAF1-214ENST00000576409 POTEDQ86YR6 584 aa19.8■□□□□ 0.76
ATPAF1-214ENST00000576409 RPGRIP1Q96KN7 1286 aa19.8■□□□□ 0.76
ATPAF1-214ENST00000576409 ERVV-2B6SEH9 535 aa19.79■□□□□ 0.76
ATPAF1-214ENST00000576409 CCDC172P0C7W6 258 aa19.79■□□□□ 0.76
ATPAF1-214ENST00000576409 TSGA10IPQ3SY00 556 aa19.79■□□□□ 0.76
ATPAF1-214ENST00000576409 LRRC47Q8N1G4 583 aaKnown RBP19.79■□□□□ 0.76
ATPAF1-214ENST00000576409 TCP1P17987 556 aaKnown RBP19.79■□□□□ 0.76
ATPAF1-214ENST00000576409 LRRC45Q96CN5 670 aa19.79■□□□□ 0.76
ATPAF1-214ENST00000576409 CHP1Q99653 195 aa19.79■□□□□ 0.76
ATPAF1-214ENST00000576409 MTRF1LQ9UGC7 380 aaKnown RBP19.79■□□□□ 0.76
ATPAF1-214ENST00000576409 TFR2Q9UP52 801 aa19.79■□□□□ 0.76
ATPAF1-214ENST00000576409 SALL3Q9BXA9 1300 aa19.79■□□□□ 0.76
ATPAF1-214ENST00000576409 ESYT3A0FGR9 886 aa19.79■□□□□ 0.76
ATPAF1-214ENST00000576409 FRMD3A2A2Y4 597 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms