RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 CTDP1Q9Y5B0 961 aaPredicted RBP15.96■□□□□ 0.15
CIITA-210ENST00000575513 RBM8AQ9Y5S9 174 aaKnown RBP15.96■□□□□ 0.15
CIITA-210ENST00000575513 A0A0G2JMZ2 1700 aa15.95■□□□□ 0.14
CIITA-210ENST00000575513 INHAP05111 366 aa15.95■□□□□ 0.14
CIITA-210ENST00000575513 FCER1AP12319 257 aa15.95■□□□□ 0.14
CIITA-210ENST00000575513 ELNP15502 786 aa15.95■□□□□ 0.14
CIITA-210ENST00000575513 CYP2B6P20813 491 aa15.95■□□□□ 0.14
CIITA-210ENST00000575513 SOX10P56693 466 aa15.95■□□□□ 0.14
CIITA-210ENST00000575513 WDR78Q5VTH9 848 aa15.95■□□□□ 0.14
CIITA-210ENST00000575513 SAMD1Q6SPF0 538 aaPredicted RBP15.95■□□□□ 0.14
CIITA-210ENST00000575513 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.95■□□□□ 0.14
CIITA-210ENST00000575513 NCAPG2Q86XI2 1143 aa15.95■□□□□ 0.14
CIITA-210ENST00000575513 NCOA7Q8NI08 942 aa15.95■□□□□ 0.14
CIITA-210ENST00000575513 UBAC1Q9BSL1 405 aa15.95■□□□□ 0.14
CIITA-210ENST00000575513 MYH4Q9Y623 1939 aa15.94■□□□□ 0.14
CIITA-210ENST00000575513 DOCK3Q8IZD9 2030 aa15.94■□□□□ 0.14
CIITA-210ENST00000575513 E7EWF7 191 aa15.94■□□□□ 0.14
CIITA-210ENST00000575513 GJB1P08034 283 aa15.94■□□□□ 0.14
CIITA-210ENST00000575513 PDHBP11177 359 aa15.94■□□□□ 0.14
CIITA-210ENST00000575513 CCL5P13501 91 aa15.94■□□□□ 0.14
CIITA-210ENST00000575513 NECTIN1Q15223 517 aa15.94■□□□□ 0.14
CIITA-210ENST00000575513 GPATCH4Q5T3I0 446 aaKnown RBP15.94■□□□□ 0.14
CIITA-210ENST00000575513 KCTD1Q719H9 257 aa15.94■□□□□ 0.14
CIITA-210ENST00000575513 ENAHQ8N8S7 591 aaPredicted RBP15.94■□□□□ 0.14
CIITA-210ENST00000575513 ZKSCAN3Q9BRR0 538 aa15.94■□□□□ 0.14
CIITA-210ENST00000575513 MTA3Q9BTC8 594 aa15.94■□□□□ 0.14
CIITA-210ENST00000575513 ANO2Q9NQ90 1003 aa15.94■□□□□ 0.14
CIITA-210ENST00000575513 LAMA4Q16363 1823 aa15.94■□□□□ 0.14
CIITA-210ENST00000575513 IGHA2P01877 340 aa15.93■□□□□ 0.14
CIITA-210ENST00000575513 ZKSCAN1P17029 563 aaPredicted RBP15.93■□□□□ 0.14
CIITA-210ENST00000575513 ADORA2AP29274 412 aa15.93■□□□□ 0.14
CIITA-210ENST00000575513 IKQ13123 557 aaPredicted RBP15.93■□□□□ 0.14
CIITA-210ENST00000575513 MTFR1Q15390 333 aa15.93■□□□□ 0.14
CIITA-210ENST00000575513 MAP3K21Q5TCX8 1036 aa15.93■□□□□ 0.14
CIITA-210ENST00000575513 SNRNP48Q6IEG0 339 aaKnown RBP15.93■□□□□ 0.14
CIITA-210ENST00000575513 RALYLQ86SE5 291 aaKnown RBP15.93■□□□□ 0.14
CIITA-210ENST00000575513 DPP9Q86TI2 863 aa15.93■□□□□ 0.14
CIITA-210ENST00000575513 PNMA1Q8ND90 353 aa15.93■□□□□ 0.14
CIITA-210ENST00000575513 CHST13Q8NET6 341 aa15.93■□□□□ 0.14
CIITA-210ENST00000575513 TRIB2Q92519 343 aa15.93■□□□□ 0.14
CIITA-210ENST00000575513 RNF208Q9H0X6 261 aa15.93■□□□□ 0.14
CIITA-210ENST00000575513 KAT14Q9H8E8 782 aa15.93■□□□□ 0.14
CIITA-210ENST00000575513 FBXO40Q9UH90 709 aa15.93■□□□□ 0.14
CIITA-210ENST00000575513 PNMA2Q9UL42 364 aa15.93■□□□□ 0.14
CIITA-210ENST00000575513 TNKSO95271 1327 aa15.93■□□□□ 0.14
CIITA-210ENST00000575513 RPTORQ8N122 1335 aa15.93■□□□□ 0.14
CIITA-210ENST00000575513 POTEFA5A3E0 1075 aa15.92■□□□□ 0.14
CIITA-210ENST00000575513 MLLT1Q03111 559 aaPredicted RBP15.92■□□□□ 0.14
CIITA-210ENST00000575513 ZNF543Q08ER8 600 aa15.92■□□□□ 0.14
CIITA-210ENST00000575513 KCTD2Q14681 263 aa15.92■□□□□ 0.14
CIITA-210ENST00000575513 SART3Q15020 963 aaKnown RBP15.92■□□□□ 0.14
CIITA-210ENST00000575513 SEC23AQ15436 765 aa15.92■□□□□ 0.14
CIITA-210ENST00000575513 CCDC96Q2M329 555 aa15.92■□□□□ 0.14
CIITA-210ENST00000575513 TKFCQ3LXA3 575 aa15.92■□□□□ 0.14
CIITA-210ENST00000575513 RNF20Q5VTR2 975 aa15.92■□□□□ 0.14
CIITA-210ENST00000575513 OLFML2BQ68BL8 750 aa15.92■□□□□ 0.14
CIITA-210ENST00000575513 PAK6Q9NQU5 681 aaPredicted RBP15.92■□□□□ 0.14
CIITA-210ENST00000575513 PRR12Q9ULL5 1215 aa15.92■□□□□ 0.14
CIITA-210ENST00000575513 ISY1Q9ULR0 285 aaKnown RBP15.92■□□□□ 0.14
CIITA-210ENST00000575513 DIS3Q9Y2L1 958 aaKnown RBP15.92■□□□□ 0.14
CIITA-210ENST00000575513 PARP14Q460N5 1801 aa15.91■□□□□ 0.14
CIITA-210ENST00000575513 KIAA0100Q14667 2235 aaKnown RBP15.91■□□□□ 0.14
CIITA-210ENST00000575513 ERICH2A1L162 156 aa15.91■□□□□ 0.14
CIITA-210ENST00000575513 SLC27A2O14975 620 aa15.91■□□□□ 0.14
CIITA-210ENST00000575513 GJA8P48165 433 aa15.91■□□□□ 0.14
CIITA-210ENST00000575513 IFIT1BQ5T764 474 aaKnown RBP15.91■□□□□ 0.14
CIITA-210ENST00000575513 MFSD14CQ5VZR4 134 aa15.91■□□□□ 0.14
CIITA-210ENST00000575513 CREB3L3Q68CJ9 461 aa15.91■□□□□ 0.14
CIITA-210ENST00000575513 CYB5R4Q7L1T6 521 aa15.91■□□□□ 0.14
CIITA-210ENST00000575513 CPXCR1Q8N123 301 aa15.91■□□□□ 0.14
CIITA-210ENST00000575513 MMP19Q99542 508 aa15.91■□□□□ 0.14
CIITA-210ENST00000575513 UNC93B1Q9H1C4 597 aa15.91■□□□□ 0.14
CIITA-210ENST00000575513 RAVER2Q9HCJ3 691 aaKnown RBP15.91■□□□□ 0.14
CIITA-210ENST00000575513 HMX1Q9NP08 348 aaPredicted RBP15.91■□□□□ 0.14
CIITA-210ENST00000575513 RIPK3Q9Y572 518 aa15.91■□□□□ 0.14
CIITA-210ENST00000575513 ZNF536O15090 1300 aa15.91■□□□□ 0.14
CIITA-210ENST00000575513 PLXNB2O15031 1838 aa15.9■□□□□ 0.14
CIITA-210ENST00000575513 EPB41L2O43491 1005 aaKnown RBP15.9■□□□□ 0.14
CIITA-210ENST00000575513 COBLO75128 1261 aa15.9■□□□□ 0.14
CIITA-210ENST00000575513 SGPL1O95470 568 aa15.9■□□□□ 0.14
CIITA-210ENST00000575513 TSGA10IPQ3SY00 556 aa15.9■□□□□ 0.14
CIITA-210ENST00000575513 ASPRV1Q53RT3 343 aa15.9■□□□□ 0.14
CIITA-210ENST00000575513 SYDE2Q5VT97 1194 aa15.9■□□□□ 0.14
CIITA-210ENST00000575513 STOX1Q6ZVD7 989 aa15.9■□□□□ 0.14
CIITA-210ENST00000575513 MB21D2Q8IYB1 491 aaPredicted RBP15.9■□□□□ 0.14
CIITA-210ENST00000575513 NPLOC4Q8TAT6 608 aa15.9■□□□□ 0.14
CIITA-210ENST00000575513 RANBP17Q9H2T7 1088 aaKnown RBP15.9■□□□□ 0.14
CIITA-210ENST00000575513 MTMR7Q9Y216 660 aa15.9■□□□□ 0.14
CIITA-210ENST00000575513 TAF6LQ9Y6J9 622 aa15.9■□□□□ 0.14
CIITA-210ENST00000575513 IFIT3O14879 490 aaKnown RBP15.89■□□□□ 0.13
CIITA-210ENST00000575513 MYCP01106 439 aaPredicted RBP15.89■□□□□ 0.13
CIITA-210ENST00000575513 ICAM1P05362 532 aa15.89■□□□□ 0.13
CIITA-210ENST00000575513 PRKAR2AP13861 404 aaKnown RBP15.89■□□□□ 0.13
CIITA-210ENST00000575513 EN2P19622 333 aaPredicted RBP15.89■□□□□ 0.13
CIITA-210ENST00000575513 CACNB2Q08289 660 aaPredicted RBP15.89■□□□□ 0.13
CIITA-210ENST00000575513 CCL14Q16627 93 aa15.89■□□□□ 0.13
CIITA-210ENST00000575513 TTBK2Q6IQ55 1244 aa15.89■□□□□ 0.13
CIITA-210ENST00000575513 TMTC2Q8N394 836 aa15.89■□□□□ 0.13
CIITA-210ENST00000575513 MSL3Q8N5Y2 521 aaKnown RBP15.89■□□□□ 0.13
CIITA-210ENST00000575513 IGDCC4Q8TDY8 1250 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms