RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 XPNPEP3Q9NQH7 507 aa18.14■□□□□ 0.49
CTNS-209ENST00000574776 PGK1P00558 417 aa18.13■□□□□ 0.49
CTNS-209ENST00000574776 ZNF865P0CJ78 1059 aaPredicted RBP18.13■□□□□ 0.49
CTNS-209ENST00000574776 TRIM60Q495X7 471 aa18.13■□□□□ 0.49
CTNS-209ENST00000574776 LRRC47Q8N1G4 583 aaKnown RBP18.13■□□□□ 0.49
CTNS-209ENST00000574776 SLC17A8Q8NDX2 589 aa18.13■□□□□ 0.49
CTNS-209ENST00000574776 RAVER2Q9HCJ3 691 aaKnown RBP18.13■□□□□ 0.49
CTNS-209ENST00000574776 PRDM5Q9NQX1 630 aaPredicted RBP18.13■□□□□ 0.49
CTNS-209ENST00000574776 CTDP1Q9Y5B0 961 aaPredicted RBP18.13■□□□□ 0.49
CTNS-209ENST00000574776 PLXNA1Q9UIW2 1896 aa18.13■□□□□ 0.49
CTNS-209ENST00000574776 MYH4Q9Y623 1939 aa18.12■□□□□ 0.49
CTNS-209ENST00000574776 TTLL1O95922 423 aa18.12■□□□□ 0.49
CTNS-209ENST00000574776 TSPY3P0CV98 308 aa18.12■□□□□ 0.49
CTNS-209ENST00000574776 TSPY8P0CW00 308 aa18.12■□□□□ 0.49
CTNS-209ENST00000574776 TFAP4Q01664 338 aa18.12■□□□□ 0.49
CTNS-209ENST00000574776 PDE4BQ07343 736 aa18.12■□□□□ 0.49
CTNS-209ENST00000574776 SNX17Q15036 470 aa18.12■□□□□ 0.49
CTNS-209ENST00000574776 ZMYM1Q5SVZ6 1142 aa18.12■□□□□ 0.49
CTNS-209ENST00000574776 NEDD1Q8NHV4 660 aa18.12■□□□□ 0.49
CTNS-209ENST00000574776 NAPBQ9H115 298 aa18.12■□□□□ 0.49
CTNS-209ENST00000574776 FEM1BQ9UK73 627 aa18.12■□□□□ 0.49
CTNS-209ENST00000574776 CNPY2Q9Y2B0 182 aa18.12■□□□□ 0.49
CTNS-209ENST00000574776 ATP2A1O14983 1001 aa18.11■□□□□ 0.49
CTNS-209ENST00000574776 SLC3A2P08195 630 aaKnown RBP18.11■□□□□ 0.49
CTNS-209ENST00000574776 MX1P20591 662 aa18.11■□□□□ 0.49
CTNS-209ENST00000574776 PPARAQ07869 468 aa18.11■□□□□ 0.49
CTNS-209ENST00000574776 SLFN13Q68D06 897 aa18.11■□□□□ 0.49
CTNS-209ENST00000574776 SH3RF1Q7Z6J0 888 aa18.11■□□□□ 0.49
CTNS-209ENST00000574776 RNF180Q86T96 592 aa18.11■□□□□ 0.49
CTNS-209ENST00000574776 CHMP4CQ96CF2 233 aa18.11■□□□□ 0.49
CTNS-209ENST00000574776 SLC38A10Q9HBR0 1119 aa18.11■□□□□ 0.49
CTNS-209ENST00000574776 MTMR10Q9NXD2 777 aa18.11■□□□□ 0.49
CTNS-209ENST00000574776 PHF24Q9UPV7 400 aa18.11■□□□□ 0.49
CTNS-209ENST00000574776 COL6A3P12111 3177 aa18.11■□□□□ 0.49
CTNS-209ENST00000574776 DNAJC25-GNG10A0A024R161 153 aa18.1■□□□□ 0.49
CTNS-209ENST00000574776 SNAI1O95863 264 aaPredicted RBP18.1■□□□□ 0.49
CTNS-209ENST00000574776 BMP3P12645 472 aa18.1■□□□□ 0.49
CTNS-209ENST00000574776 AKR1A1P14550 325 aa18.1■□□□□ 0.49
CTNS-209ENST00000574776 TLE2Q04725 743 aa18.1■□□□□ 0.49
CTNS-209ENST00000574776 ANKRD45Q5TZF3 282 aa18.1■□□□□ 0.49
CTNS-209ENST00000574776 CCDC129Q6ZRS4 1044 aa18.1■□□□□ 0.49
CTNS-209ENST00000574776 GMCL1P1Q8NEA9 526 aa18.1■□□□□ 0.49
CTNS-209ENST00000574776 BADQ92934 168 aa18.1■□□□□ 0.49
CTNS-209ENST00000574776 LENG1Q96BZ8 264 aaPredicted RBP18.1■□□□□ 0.49
CTNS-209ENST00000574776 INCENPQ9NQS7 918 aa18.1■□□□□ 0.49
CTNS-209ENST00000574776 TRIM43BA6NCK2 446 aa18.09■□□□□ 0.49
CTNS-209ENST00000574776 C1orf53Q5VUE5 145 aa18.09■□□□□ 0.49
CTNS-209ENST00000574776 MAMDC4Q6UXC1 1216 aa18.09■□□□□ 0.49
CTNS-209ENST00000574776 ANKRD35Q8N283 1001 aa18.09■□□□□ 0.49
CTNS-209ENST00000574776 MSL3Q8N5Y2 521 aaKnown RBP18.09■□□□□ 0.49
CTNS-209ENST00000574776 TRIM43Q96BQ3 446 aaPredicted RBP18.09■□□□□ 0.49
CTNS-209ENST00000574776 PDLIM7Q9NR12 457 aa18.09■□□□□ 0.49
CTNS-209ENST00000574776 ZBTB47Q9UFB7 747 aaPredicted RBP18.09■□□□□ 0.49
CTNS-209ENST00000574776 FAM184BQ9ULE4 1060 aa18.09■□□□□ 0.49
CTNS-209ENST00000574776 ISY1Q9ULR0 285 aaKnown RBP18.09■□□□□ 0.49
CTNS-209ENST00000574776 SYNPO2Q9UMS6 1093 aa18.09■□□□□ 0.49
CTNS-209ENST00000574776 SYNGAP1Q96PV0 1343 aa18.08■□□□□ 0.49
CTNS-209ENST00000574776 TMEM232C9JQI7 657 aa18.08■□□□□ 0.48
CTNS-209ENST00000574776 RRP1P56182 461 aaKnown RBP18.08■□□□□ 0.48
CTNS-209ENST00000574776 CTDSPL2Q05D32 466 aa18.08■□□□□ 0.48
CTNS-209ENST00000574776 SHHQ15465 462 aa18.08■□□□□ 0.48
CTNS-209ENST00000574776 ZHX1Q9UKY1 873 aaPredicted RBP18.08■□□□□ 0.48
CTNS-209ENST00000574776 A0A1W2PQ45 241 aaPredicted RBP18.07■□□□□ 0.48
CTNS-209ENST00000574776 A0A1W2PQY0 241 aa18.07■□□□□ 0.48
CTNS-209ENST00000574776 POTEB2H3BUK9 544 aa18.07■□□□□ 0.48
CTNS-209ENST00000574776 ADAMTS4O75173 837 aa18.07■□□□□ 0.48
CTNS-209ENST00000574776 MCCP23508 829 aa18.07■□□□□ 0.48
CTNS-209ENST00000574776 CHST13Q8NET6 341 aa18.07■□□□□ 0.48
CTNS-209ENST00000574776 CRBNQ96SW2 442 aa18.07■□□□□ 0.48
CTNS-209ENST00000574776 HOMER2Q9NSB8 354 aa18.07■□□□□ 0.48
CTNS-209ENST00000574776 FBXO40Q9UH90 709 aa18.07■□□□□ 0.48
CTNS-209ENST00000574776 STXBP5LQ9Y2K9 1186 aa18.07■□□□□ 0.48
CTNS-209ENST00000574776 PLIN4Q96Q06 1357 aa18.06■□□□□ 0.48
CTNS-209ENST00000574776 SALL3Q9BXA9 1300 aa18.06■□□□□ 0.48
CTNS-209ENST00000574776 FOXP2O15409 715 aa18.06■□□□□ 0.48
CTNS-209ENST00000574776 SLC1A4P43007 532 aa18.06■□□□□ 0.48
CTNS-209ENST00000574776 OAZ1P54368 228 aa18.06■□□□□ 0.48
CTNS-209ENST00000574776 ACVR2BQ13705 512 aa18.06■□□□□ 0.48
CTNS-209ENST00000574776 C9orf50Q5SZB4 431 aa18.06■□□□□ 0.48
CTNS-209ENST00000574776 ZNF467Q7Z7K2 595 aaPredicted RBP18.06■□□□□ 0.48
CTNS-209ENST00000574776 CHURC1Q8WUH1 139 aa18.06■□□□□ 0.48
CTNS-209ENST00000574776 STAG1Q8WVM7 1258 aa18.06■□□□□ 0.48
CTNS-209ENST00000574776 TSEN34Q9BSV6 310 aaKnown RBP18.06■□□□□ 0.48
CTNS-209ENST00000574776 IL17RBQ9NRM6 502 aa18.06■□□□□ 0.48
CTNS-209ENST00000574776 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.06■□□□□ 0.48
CTNS-209ENST00000574776 TACC3Q9Y6A5 838 aa18.06■□□□□ 0.48
CTNS-209ENST00000574776 LTBP2Q14767 1821 aa18.06■□□□□ 0.48
CTNS-209ENST00000574776 SYNRGQ9UMZ2 1314 aa18.05■□□□□ 0.48
CTNS-209ENST00000574776 TSPY2A6NKD2 308 aa18.05■□□□□ 0.48
CTNS-209ENST00000574776 NMT2O60551 498 aa18.05■□□□□ 0.48
CTNS-209ENST00000574776 PQBP1O60828 265 aaKnown RBP18.05■□□□□ 0.48
CTNS-209ENST00000574776 FDX1P10109 184 aa18.05■□□□□ 0.48
CTNS-209ENST00000574776 ITGB8P26012 769 aa18.05■□□□□ 0.48
CTNS-209ENST00000574776 STAT2P52630 851 aa18.05■□□□□ 0.48
CTNS-209ENST00000574776 ACLYP53396 1101 aa18.05■□□□□ 0.48
CTNS-209ENST00000574776 IRX5P78411 483 aaPredicted RBP18.05■□□□□ 0.48
CTNS-209ENST00000574776 CNTN2Q02246 1040 aa18.05■□□□□ 0.48
CTNS-209ENST00000574776 IKQ13123 557 aaPredicted RBP18.05■□□□□ 0.48
CTNS-209ENST00000574776 KCNA10Q16322 511 aa18.05■□□□□ 0.48
CTNS-209ENST00000574776 VPS53Q5VIR6 699 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms