RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 DIS3Q9Y2L1 958 aaKnown RBP20.58■□□□□ 0.89
LITAF-211ENST00000572255 CTDP1Q9Y5B0 961 aaPredicted RBP20.58■□□□□ 0.89
LITAF-211ENST00000572255 ATP2A1O14983 1001 aa20.57■□□□□ 0.88
LITAF-211ENST00000572255 SMC5Q8IY18 1101 aa20.57■□□□□ 0.88
LITAF-211ENST00000572255 CPXCR1Q8N123 301 aa20.57■□□□□ 0.88
LITAF-211ENST00000572255 ARRDC4Q8NCT1 418 aa20.57■□□□□ 0.88
LITAF-211ENST00000572255 FAM227BQ96M60 508 aa20.57■□□□□ 0.88
LITAF-211ENST00000572255 TINF2Q9BSI4 451 aa20.57■□□□□ 0.88
LITAF-211ENST00000572255 RWDD1Q9H446 243 aaPredicted RBP20.57■□□□□ 0.88
LITAF-211ENST00000572255 INCENPQ9NQS7 918 aa20.57■□□□□ 0.88
LITAF-211ENST00000572255 RIPK3Q9Y572 518 aa20.57■□□□□ 0.88
LITAF-211ENST00000572255 SZT2Q5T011 3432 aa20.56■□□□□ 0.88
LITAF-211ENST00000572255 A0A0D9SFI3 127 aa20.56■□□□□ 0.88
LITAF-211ENST00000572255 BMP3P12645 472 aa20.56■□□□□ 0.88
LITAF-211ENST00000572255 BMP8BP34820 402 aa20.56■□□□□ 0.88
LITAF-211ENST00000572255 MAGEA10P43363 369 aaPredicted RBP20.56■□□□□ 0.88
LITAF-211ENST00000572255 SLC4A3P48751 1232 aa20.56■□□□□ 0.88
LITAF-211ENST00000572255 ALX1Q15699 326 aa20.56■□□□□ 0.88
LITAF-211ENST00000572255 GJC2Q5T442 439 aaPredicted RBP20.56■□□□□ 0.88
LITAF-211ENST00000572255 B4GALNT3Q6L9W6 998 aa20.56■□□□□ 0.88
LITAF-211ENST00000572255 TICAM2Q86XR7 235 aa20.56■□□□□ 0.88
LITAF-211ENST00000572255 SLC38A10Q9HBR0 1119 aa20.56■□□□□ 0.88
LITAF-211ENST00000572255 NRBP1Q9UHY1 535 aa20.56■□□□□ 0.88
LITAF-211ENST00000572255 ANAPC4Q9UJX5 808 aa20.56■□□□□ 0.88
LITAF-211ENST00000572255 SMCHD1A6NHR9 2005 aa20.56■□□□□ 0.88
LITAF-211ENST00000572255 TSPY2A6NKD2 308 aa20.55■□□□□ 0.88
LITAF-211ENST00000572255 PPP4R3BQ5MIZ7 849 aa20.55■□□□□ 0.88
LITAF-211ENST00000572255 GMCL1Q96IK5 515 aa20.55■□□□□ 0.88
LITAF-211ENST00000572255 RAVER2Q9HCJ3 691 aaKnown RBP20.55■□□□□ 0.88
LITAF-211ENST00000572255 ISY1Q9ULR0 285 aaKnown RBP20.55■□□□□ 0.88
LITAF-211ENST00000572255 TACC3Q9Y6A5 838 aa20.55■□□□□ 0.88
LITAF-211ENST00000572255 TRIM6-TRIM34B2RNG4 842 aa20.54■□□□□ 0.88
LITAF-211ENST00000572255 KBTBD13C9JR72 458 aa20.54■□□□□ 0.88
LITAF-211ENST00000572255 ATN1P54259 1190 aaPredicted RBP20.54■□□□□ 0.88
LITAF-211ENST00000572255 MCMDC2Q4G0Z9 681 aa20.54■□□□□ 0.88
LITAF-211ENST00000572255 EXOC6Q8TAG9 804 aa20.54■□□□□ 0.88
LITAF-211ENST00000572255 DDX11Q96FC9 970 aa20.54■□□□□ 0.88
LITAF-211ENST00000572255 IL17RBQ9NRM6 502 aa20.54■□□□□ 0.88
LITAF-211ENST00000572255 STX8Q9UNK0 236 aa20.54■□□□□ 0.88
LITAF-211ENST00000572255 DNAJC25-GNG10A0A024R161 153 aa20.53■□□□□ 0.88
LITAF-211ENST00000572255 TMEM232C9JQI7 657 aa20.53■□□□□ 0.88
LITAF-211ENST00000572255 RANBP6O60518 1105 aaKnown RBP20.53■□□□□ 0.88
LITAF-211ENST00000572255 NMT2O60551 498 aa20.53■□□□□ 0.88
LITAF-211ENST00000572255 IGHDP01880 384 aa20.53■□□□□ 0.88
LITAF-211ENST00000572255 MYCNP04198 464 aaPredicted RBP20.53■□□□□ 0.88
LITAF-211ENST00000572255 TAL1P17542 331 aaPredicted RBP20.53■□□□□ 0.88
LITAF-211ENST00000572255 OAZ1P54368 228 aa20.53■□□□□ 0.88
LITAF-211ENST00000572255 NMIQ13287 307 aaPredicted RBP20.53■□□□□ 0.88
LITAF-211ENST00000572255 CHD1LQ86WJ1 897 aa20.53■□□□□ 0.88
LITAF-211ENST00000572255 RILPL2Q969X0 211 aa20.53■□□□□ 0.88
LITAF-211ENST00000572255 CHMP4CQ96CF2 233 aa20.53■□□□□ 0.88
LITAF-211ENST00000572255 ORC4O43929 436 aa20.52■□□□□ 0.88
LITAF-211ENST00000572255 FGAP02671 866 aa20.52■□□□□ 0.88
LITAF-211ENST00000572255 FDX1P10109 184 aa20.52■□□□□ 0.88
LITAF-211ENST00000572255 MCCP23508 829 aa20.52■□□□□ 0.88
LITAF-211ENST00000572255 SLC1A4P43007 532 aa20.52■□□□□ 0.88
LITAF-211ENST00000572255 STAT2P52630 851 aa20.52■□□□□ 0.88
LITAF-211ENST00000572255 LRRC41Q15345 812 aa20.52■□□□□ 0.88
LITAF-211ENST00000572255 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.52■□□□□ 0.88
LITAF-211ENST00000572255 ZNF589Q86UQ0 364 aaPredicted RBP20.52■□□□□ 0.88
LITAF-211ENST00000572255 FAM160B2Q86V87 743 aa20.52■□□□□ 0.88
LITAF-211ENST00000572255 CHURC1Q8WUH1 139 aa20.52■□□□□ 0.88
LITAF-211ENST00000572255 LAMA3Q16787 3333 aa20.51■□□□□ 0.87
LITAF-211ENST00000572255 SOX1O00570 391 aaPredicted RBP20.51■□□□□ 0.87
LITAF-211ENST00000572255 FGRP09769 529 aa20.51■□□□□ 0.87
LITAF-211ENST00000572255 ZNF865P0CJ78 1059 aaPredicted RBP20.51■□□□□ 0.87
LITAF-211ENST00000572255 HSPD1P10809 573 aaKnown RBP20.51■□□□□ 0.87
LITAF-211ENST00000572255 RARBP10826 455 aa20.51■□□□□ 0.87
LITAF-211ENST00000572255 RTP1P59025 263 aa20.51■□□□□ 0.87
LITAF-211ENST00000572255 NUCB1Q02818 461 aa20.51■□□□□ 0.87
LITAF-211ENST00000572255 IKQ13123 557 aaPredicted RBP20.51■□□□□ 0.87
LITAF-211ENST00000572255 MSL3Q8N5Y2 521 aaKnown RBP20.51■□□□□ 0.87
LITAF-211ENST00000572255 CHST13Q8NET6 341 aa20.51■□□□□ 0.87
LITAF-211ENST00000572255 STAG1Q8WVM7 1258 aa20.51■□□□□ 0.87
LITAF-211ENST00000572255 XPNPEP3Q9NQH7 507 aa20.51■□□□□ 0.87
LITAF-211ENST00000572255 FBXO40Q9UH90 709 aa20.51■□□□□ 0.87
LITAF-211ENST00000572255 CNPY2Q9Y2B0 182 aa20.51■□□□□ 0.87
LITAF-211ENST00000572255 ZMYM6O95789 1325 aa20.51■□□□□ 0.87
LITAF-211ENST00000572255 CCDC171Q6TFL3 1326 aa20.51■□□□□ 0.87
LITAF-211ENST00000572255 SYNGAP1Q96PV0 1343 aa20.51■□□□□ 0.87
LITAF-211ENST00000572255 ADCYAP1R1P41586 468 aa20.5■□□□□ 0.87
LITAF-211ENST00000572255 PLEKHM2Q8IWE5 1019 aa20.5■□□□□ 0.87
LITAF-211ENST00000572255 ANKRD35Q8N283 1001 aa20.5■□□□□ 0.87
LITAF-211ENST00000572255 UBE2OQ9C0C9 1292 aaKnown RBP20.5■□□□□ 0.87
LITAF-211ENST00000572255 TOMM22Q9NS69 142 aa20.5■□□□□ 0.87
LITAF-211ENST00000572255 MCM3APO60318 1980 aa20.49■□□□□ 0.87
LITAF-211ENST00000572255 PLA2G6O60733 806 aa20.49■□□□□ 0.87
LITAF-211ENST00000572255 AKR1A1P14550 325 aa20.49■□□□□ 0.87
LITAF-211ENST00000572255 NOVP48745 357 aa20.49■□□□□ 0.87
LITAF-211ENST00000572255 MDM2Q00987 491 aaPredicted RBP20.49■□□□□ 0.87
LITAF-211ENST00000572255 RRP12Q5JTH9 1297 aaKnown RBP20.49■□□□□ 0.87
LITAF-211ENST00000572255 RCSD1Q6JBY9 416 aa20.49■□□□□ 0.87
LITAF-211ENST00000572255 MAMDC4Q6UXC1 1216 aa20.49■□□□□ 0.87
LITAF-211ENST00000572255 SLC39A5Q6ZMH5 540 aa20.49■□□□□ 0.87
LITAF-211ENST00000572255 KCTD1Q719H9 257 aa20.49■□□□□ 0.87
LITAF-211ENST00000572255 RASGRP2Q7LDG7 609 aa20.49■□□□□ 0.87
LITAF-211ENST00000572255 ZNF467Q7Z7K2 595 aaPredicted RBP20.49■□□□□ 0.87
LITAF-211ENST00000572255 FERMT2Q96AC1 680 aa20.49■□□□□ 0.87
LITAF-211ENST00000572255 LRCH3Q96II8 777 aa20.49■□□□□ 0.87
LITAF-211ENST00000572255 OSBPL3Q9H4L5 887 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms