RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 BADQ92934 168 aa20.96■□□□□ 0.95
CIITA-206ENST00000571190 FRMPD3Q5JV73 1810 aa20.96■□□□□ 0.95
CIITA-206ENST00000571190 ADAMTS4O75173 837 aa20.95■□□□□ 0.94
CIITA-206ENST00000571190 APPP05067 770 aa20.95■□□□□ 0.94
CIITA-206ENST00000571190 ITGB8P26012 769 aa20.95■□□□□ 0.94
CIITA-206ENST00000571190 FAM109BQ6ICB4 259 aaPredicted RBP20.95■□□□□ 0.94
CIITA-206ENST00000571190 MAMDC4Q6UXC1 1216 aa20.95■□□□□ 0.94
CIITA-206ENST00000571190 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.95■□□□□ 0.94
CIITA-206ENST00000571190 ZNF444Q8N0Y2 327 aaPredicted RBP20.95■□□□□ 0.94
CIITA-206ENST00000571190 SLC38A10Q9HBR0 1119 aa20.95■□□□□ 0.94
CIITA-206ENST00000571190 RAVER2Q9HCJ3 691 aaKnown RBP20.95■□□□□ 0.94
CIITA-206ENST00000571190 PRDM5Q9NQX1 630 aaPredicted RBP20.95■□□□□ 0.94
CIITA-206ENST00000571190 TTC41PQ6P2S7 1318 aa20.95■□□□□ 0.94
CIITA-206ENST00000571190 FOXP2O15409 715 aa20.94■□□□□ 0.94
CIITA-206ENST00000571190 AKR1A1P14550 325 aa20.94■□□□□ 0.94
CIITA-206ENST00000571190 ZMYM1Q5SVZ6 1142 aa20.94■□□□□ 0.94
CIITA-206ENST00000571190 CPXCR1Q8N123 301 aa20.94■□□□□ 0.94
CIITA-206ENST00000571190 LRRC47Q8N1G4 583 aaKnown RBP20.94■□□□□ 0.94
CIITA-206ENST00000571190 MSL3Q8N5Y2 521 aaKnown RBP20.94■□□□□ 0.94
CIITA-206ENST00000571190 NEDD1Q8NHV4 660 aa20.94■□□□□ 0.94
CIITA-206ENST00000571190 KIFC2Q96AC6 838 aa20.94■□□□□ 0.94
CIITA-206ENST00000571190 FGD4Q96M96 766 aa20.94■□□□□ 0.94
CIITA-206ENST00000571190 COL6A3P12111 3177 aa20.93■□□□□ 0.94
CIITA-206ENST00000571190 DLL1O00548 723 aa20.93■□□□□ 0.94
CIITA-206ENST00000571190 ZBED4O75132 1171 aa20.93■□□□□ 0.94
CIITA-206ENST00000571190 RNF180Q86T96 592 aa20.93■□□□□ 0.94
CIITA-206ENST00000571190 GMCL1P1Q8NEA9 526 aa20.93■□□□□ 0.94
CIITA-206ENST00000571190 DDX11Q96FC9 970 aa20.93■□□□□ 0.94
CIITA-206ENST00000571190 GUCD1Q96NT3 240 aa20.93■□□□□ 0.94
CIITA-206ENST00000571190 SYNPO2Q9UMS6 1093 aa20.93■□□□□ 0.94
CIITA-206ENST00000571190 CNPY2Q9Y2B0 182 aa20.93■□□□□ 0.94
CIITA-206ENST00000571190 GREB1LQ9C091 1923 aaPredicted RBP20.93■□□□□ 0.94
CIITA-206ENST00000571190 PLIN4Q96Q06 1357 aa20.93■□□□□ 0.94
CIITA-206ENST00000571190 A0A1W2PQ45 241 aaPredicted RBP20.92■□□□□ 0.94
CIITA-206ENST00000571190 A0A1W2PQY0 241 aa20.92■□□□□ 0.94
CIITA-206ENST00000571190 TTLL1O95922 423 aa20.92■□□□□ 0.94
CIITA-206ENST00000571190 SLC4A3P48751 1232 aa20.92■□□□□ 0.94
CIITA-206ENST00000571190 CCSAPQ6IQ19 270 aaPredicted RBP20.92■□□□□ 0.94
CIITA-206ENST00000571190 KLHDC9Q8NEP7 349 aa20.92■□□□□ 0.94
CIITA-206ENST00000571190 ZNF287Q9HBT7 754 aa20.92■□□□□ 0.94
CIITA-206ENST00000571190 FEM1BQ9UK73 627 aa20.92■□□□□ 0.94
CIITA-206ENST00000571190 SYNGAP1Q96PV0 1343 aa20.92■□□□□ 0.94
CIITA-206ENST00000571190 SALL3Q9BXA9 1300 aa20.92■□□□□ 0.94
CIITA-206ENST00000571190 ERC2O15083 957 aa20.91■□□□□ 0.94
CIITA-206ENST00000571190 ADCY6O43306 1168 aa20.91■□□□□ 0.94
CIITA-206ENST00000571190 IRX5P78411 483 aaPredicted RBP20.91■□□□□ 0.94
CIITA-206ENST00000571190 TFAP4Q01664 338 aa20.91■□□□□ 0.94
CIITA-206ENST00000571190 PPARAQ07869 468 aa20.91■□□□□ 0.94
CIITA-206ENST00000571190 PARP14Q460N5 1801 aa20.91■□□□□ 0.94
CIITA-206ENST00000571190 SLFN13Q68D06 897 aa20.91■□□□□ 0.94
CIITA-206ENST00000571190 ZNF467Q7Z7K2 595 aaPredicted RBP20.91■□□□□ 0.94
CIITA-206ENST00000571190 TACC3Q9Y6A5 838 aa20.91■□□□□ 0.94
CIITA-206ENST00000571190 SYNRGQ9UMZ2 1314 aa20.9■□□□□ 0.94
CIITA-206ENST00000571190 MYADML2A6NDP7 307 aa20.9■□□□□ 0.94
CIITA-206ENST00000571190 BMP3P12645 472 aa20.9■□□□□ 0.94
CIITA-206ENST00000571190 EPHB4P54760 987 aa20.9■□□□□ 0.94
CIITA-206ENST00000571190 LRRFIP1Q32MZ4 808 aaKnown RBP20.9■□□□□ 0.94
CIITA-206ENST00000571190 FAM161BQ96MY7 647 aa20.9■□□□□ 0.94
CIITA-206ENST00000571190 TSEN34Q9BSV6 310 aaKnown RBP20.9■□□□□ 0.94
CIITA-206ENST00000571190 FSD1Q9BTV5 496 aa20.9■□□□□ 0.94
CIITA-206ENST00000571190 NACAP1Q9BZK3 213 aa20.9■□□□□ 0.94
CIITA-206ENST00000571190 INCENPQ9NQS7 918 aa20.9■□□□□ 0.94
CIITA-206ENST00000571190 FAM184BQ9ULE4 1060 aa20.9■□□□□ 0.94
CIITA-206ENST00000571190 DNAH12Q6ZR08 3092 aa20.9■□□□□ 0.94
CIITA-206ENST00000571190 CLTBP09497 229 aa20.89■□□□□ 0.93
CIITA-206ENST00000571190 TSPY3P0CV98 308 aa20.89■□□□□ 0.93
CIITA-206ENST00000571190 TSPY8P0CW00 308 aa20.89■□□□□ 0.93
CIITA-206ENST00000571190 ACLYP53396 1101 aa20.89■□□□□ 0.93
CIITA-206ENST00000571190 OAZ1P54368 228 aa20.89■□□□□ 0.93
CIITA-206ENST00000571190 PDE4BQ07343 736 aa20.89■□□□□ 0.93
CIITA-206ENST00000571190 ACVR2BQ13705 512 aa20.89■□□□□ 0.93
CIITA-206ENST00000571190 CCDC129Q6ZRS4 1044 aa20.89■□□□□ 0.93
CIITA-206ENST00000571190 CHST13Q8NET6 341 aa20.89■□□□□ 0.93
CIITA-206ENST00000571190 NAPBQ9H115 298 aa20.89■□□□□ 0.93
CIITA-206ENST00000571190 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.89■□□□□ 0.93
CIITA-206ENST00000571190 ZHX1Q9UKY1 873 aaPredicted RBP20.89■□□□□ 0.93
CIITA-206ENST00000571190 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.89■□□□□ 0.93
CIITA-206ENST00000571190 ZNF536O15090 1300 aa20.88■□□□□ 0.93
CIITA-206ENST00000571190 TMEM232C9JQI7 657 aa20.88■□□□□ 0.93
CIITA-206ENST00000571190 KIAA0355O15063 1070 aa20.88■□□□□ 0.93
CIITA-206ENST00000571190 MX1P20591 662 aa20.88■□□□□ 0.93
CIITA-206ENST00000571190 KCNA10Q16322 511 aa20.88■□□□□ 0.93
CIITA-206ENST00000571190 ANKRD33Q7Z3H0 272 aa20.88■□□□□ 0.93
CIITA-206ENST00000571190 ANKRD35Q8N283 1001 aa20.88■□□□□ 0.93
CIITA-206ENST00000571190 KATNBL1Q9H079 304 aa20.88■□□□□ 0.93
CIITA-206ENST00000571190 CTDP1Q9Y5B0 961 aaPredicted RBP20.88■□□□□ 0.93
CIITA-206ENST00000571190 PQBP1O60828 265 aaKnown RBP20.87■□□□□ 0.93
CIITA-206ENST00000571190 DUSP11O75319 330 aaKnown RBP20.87■□□□□ 0.93
CIITA-206ENST00000571190 FAAP100Q0VG06 881 aa20.87■□□□□ 0.93
CIITA-206ENST00000571190 GMCL1Q96IK5 515 aa20.87■□□□□ 0.93
CIITA-206ENST00000571190 IL17RBQ9NRM6 502 aa20.87■□□□□ 0.93
CIITA-206ENST00000571190 FBXO40Q9UH90 709 aa20.87■□□□□ 0.93
CIITA-206ENST00000571190 MOXD2PA6NHM9 499 aa20.86■□□□□ 0.93
CIITA-206ENST00000571190 CST5P28325 142 aaPredicted RBP20.86■□□□□ 0.93
CIITA-206ENST00000571190 CNTN2Q02246 1040 aa20.86■□□□□ 0.93
CIITA-206ENST00000571190 CTDSPL2Q05D32 466 aa20.86■□□□□ 0.93
CIITA-206ENST00000571190 CCDC144BQ3MJ40 725 aa20.86■□□□□ 0.93
CIITA-206ENST00000571190 VPS53Q5VIR6 699 aa20.86■□□□□ 0.93
CIITA-206ENST00000571190 ARMCX2Q7L311 632 aa20.86■□□□□ 0.93
CIITA-206ENST00000571190 RASGRP2Q7LDG7 609 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms