RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 FAM200AQ8TCP9 573 aa19.87■□□□□ 0.77
RPAIN-208ENST00000571043 OXER1Q8TDS5 423 aa19.87■□□□□ 0.77
RPAIN-208ENST00000571043 TRIM44Q96DX7 344 aaPredicted RBP19.87■□□□□ 0.77
RPAIN-208ENST00000571043 CDCA5Q96FF9 252 aa19.87■□□□□ 0.77
RPAIN-208ENST00000571043 A0A1B0GVL5 298 aa19.86■□□□□ 0.77
RPAIN-208ENST00000571043 MARCKSP29966 332 aaPredicted RBP19.86■□□□□ 0.77
RPAIN-208ENST00000571043 DCAF15Q66K64 600 aa19.86■□□□□ 0.77
RPAIN-208ENST00000571043 CCDC17Q96LX7 622 aa19.86■□□□□ 0.77
RPAIN-208ENST00000571043 hCG_1642624A0A1W2PR95 340 aa19.86■□□□□ 0.77
RPAIN-208ENST00000571043 PHF20L1A8MW92 1017 aa19.86■□□□□ 0.77
RPAIN-208ENST00000571043 ITGBL1O95965 494 aaPredicted RBP19.86■□□□□ 0.77
RPAIN-208ENST00000571043 SMARCA1P28370 1054 aa19.86■□□□□ 0.77
RPAIN-208ENST00000571043 NPY5RQ15761 445 aa19.86■□□□□ 0.77
RPAIN-208ENST00000571043 CERKLQ49MI3 558 aaPredicted RBP19.86■□□□□ 0.77
RPAIN-208ENST00000571043 STAG2Q8N3U4 1231 aa19.86■□□□□ 0.77
RPAIN-208ENST00000571043 KRI1Q8N9T8 703 aaKnown RBP19.86■□□□□ 0.77
RPAIN-208ENST00000571043 TNFRSF25Q93038 417 aa19.86■□□□□ 0.77
RPAIN-208ENST00000571043 CEP95Q96GE4 821 aa19.86■□□□□ 0.77
RPAIN-208ENST00000571043 TIGD1Q96MW7 591 aa19.86■□□□□ 0.77
RPAIN-208ENST00000571043 HPSEQ9Y251 543 aa19.86■□□□□ 0.77
RPAIN-208ENST00000571043 SSC5DA1L4H1 1573 aa19.85■□□□□ 0.77
RPAIN-208ENST00000571043 IGKV6D-41A0A0C4DH26 115 aa19.85■□□□□ 0.77
RPAIN-208ENST00000571043 BMP15O95972 392 aa19.85■□□□□ 0.77
RPAIN-208ENST00000571043 PFKFB1P16118 471 aa19.85■□□□□ 0.77
RPAIN-208ENST00000571043 CALML3P27482 149 aa19.85■□□□□ 0.77
RPAIN-208ENST00000571043 HS1BP3Q53T59 392 aa19.85■□□□□ 0.77
RPAIN-208ENST00000571043 RESP18Q5W5W9 173 aa19.85■□□□□ 0.77
RPAIN-208ENST00000571043 ZNF784Q8NCA9 323 aaPredicted RBP19.85■□□□□ 0.77
RPAIN-208ENST00000571043 ZNF341Q9BYN7 854 aa19.85■□□□□ 0.77
RPAIN-208ENST00000571043 CABP5Q9NP86 173 aa19.85■□□□□ 0.77
RPAIN-208ENST00000571043 ZNF112Q9UJU3 913 aa19.85■□□□□ 0.77
RPAIN-208ENST00000571043 NOL7Q9UMY1 257 aaKnown RBP19.85■□□□□ 0.77
RPAIN-208ENST00000571043 USP2O75604 605 aaPredicted RBP19.84■□□□□ 0.77
RPAIN-208ENST00000571043 PTPREP23469 700 aa19.84■□□□□ 0.77
RPAIN-208ENST00000571043 NF2P35240 595 aa19.84■□□□□ 0.77
RPAIN-208ENST00000571043 NLRP5P59047 1200 aa19.84■□□□□ 0.77
RPAIN-208ENST00000571043 RRP1BQ14684 758 aaKnown RBP19.84■□□□□ 0.77
RPAIN-208ENST00000571043 SPZ1Q9BXG8 430 aa19.84■□□□□ 0.77
RPAIN-208ENST00000571043 MTMR4Q9NYA4 1195 aa19.84■□□□□ 0.77
RPAIN-208ENST00000571043 TRIM75PA6NK02 468 aa19.83■□□□□ 0.77
RPAIN-208ENST00000571043 TRAF5O00463 557 aa19.83■□□□□ 0.77
RPAIN-208ENST00000571043 ZNF202O95125 648 aa19.83■□□□□ 0.77
RPAIN-208ENST00000571043 PARP1P09874 1014 aaKnown RBP19.83■□□□□ 0.77
RPAIN-208ENST00000571043 PPP4R3BQ5MIZ7 849 aa19.83■□□□□ 0.77
RPAIN-208ENST00000571043 SHC4Q6S5L8 630 aa19.83■□□□□ 0.77
RPAIN-208ENST00000571043 ZNF579Q8NAF0 562 aaKnown RBP19.83■□□□□ 0.77
RPAIN-208ENST00000571043 KLRG1Q96E93 195 aa19.83■□□□□ 0.77
RPAIN-208ENST00000571043 SDF4Q9BRK5 362 aa19.83■□□□□ 0.77
RPAIN-208ENST00000571043 PPP1R12BO60237 982 aaPredicted RBP19.82■□□□□ 0.76
RPAIN-208ENST00000571043 AKR1B1P15121 316 aa19.82■□□□□ 0.76
RPAIN-208ENST00000571043 TRAPPC10P48553 1259 aa19.82■□□□□ 0.76
RPAIN-208ENST00000571043 STX1AQ16623 288 aa19.82■□□□□ 0.76
RPAIN-208ENST00000571043 ANO6Q4KMQ2 910 aa19.82■□□□□ 0.76
RPAIN-208ENST00000571043 GALNT17Q6IS24 598 aa19.82■□□□□ 0.76
RPAIN-208ENST00000571043 FAM43AQ8N2R8 423 aa19.82■□□□□ 0.76
RPAIN-208ENST00000571043 PCDHB6Q9Y5E3 794 aa19.82■□□□□ 0.76
RPAIN-208ENST00000571043 TRPM7Q96QT4 1865 aa19.82■□□□□ 0.76
RPAIN-208ENST00000571043 KLRF2D3W0D1 207 aa19.81■□□□□ 0.76
RPAIN-208ENST00000571043 CTNND1O60716 968 aaKnown RBP19.81■□□□□ 0.76
RPAIN-208ENST00000571043 CAP2P40123 477 aa19.81■□□□□ 0.76
RPAIN-208ENST00000571043 SYKP43405 635 aa19.81■□□□□ 0.76
RPAIN-208ENST00000571043 FMR1Q06787 632 aaKnown RBP eCLIP19.81■□□□□ 0.76
RPAIN-208ENST00000571043 CCDC148Q8NFR7 591 aa19.81■□□□□ 0.76
RPAIN-208ENST00000571043 FBXO2Q9UK22 296 aaPredicted RBP19.81■□□□□ 0.76
RPAIN-208ENST00000571043 SRPRBQ9Y5M8 271 aaKnown RBP19.81■□□□□ 0.76
RPAIN-208ENST00000571043 GREB1LQ9C091 1923 aaPredicted RBP19.81■□□□□ 0.76
RPAIN-208ENST00000571043 CYTH3O43739 400 aa19.81■□□□□ 0.76
RPAIN-208ENST00000571043 TOMM70O94826 608 aa19.81■□□□□ 0.76
RPAIN-208ENST00000571043 JAG1P78504 1218 aa19.81■□□□□ 0.76
RPAIN-208ENST00000571043 ABCB5Q2M3G0 1257 aa19.81■□□□□ 0.76
RPAIN-208ENST00000571043 SLC35G1Q2M3R5 365 aa19.81■□□□□ 0.76
RPAIN-208ENST00000571043 ELOA2Q8IYF1 753 aaPredicted RBP19.81■□□□□ 0.76
RPAIN-208ENST00000571043 ANO10Q9NW15 660 aa19.81■□□□□ 0.76
RPAIN-208ENST00000571043 FZD1Q9UP38 647 aa19.81■□□□□ 0.76
RPAIN-208ENST00000571043 GDF11O95390 407 aa19.8■□□□□ 0.76
RPAIN-208ENST00000571043 TTLL1O95922 423 aa19.8■□□□□ 0.76
RPAIN-208ENST00000571043 EARS2Q5JPH6 523 aaKnown RBP19.8■□□□□ 0.76
RPAIN-208ENST00000571043 TMEM179Q6ZVK1 233 aa19.8■□□□□ 0.76
RPAIN-208ENST00000571043 DAGLBQ8NCG7 672 aa19.8■□□□□ 0.76
RPAIN-208ENST00000571043 SMC1BQ8NDV3 1235 aa19.8■□□□□ 0.76
RPAIN-208ENST00000571043 RBM46Q8TBY0 533 aaKnown RBP19.8■□□□□ 0.76
RPAIN-208ENST00000571043 CLIC6Q96NY7 704 aa19.8■□□□□ 0.76
RPAIN-208ENST00000571043 CBX8Q9HC52 389 aa19.8■□□□□ 0.76
RPAIN-208ENST00000571043 GINM1Q9NU53 330 aa19.8■□□□□ 0.76
RPAIN-208ENST00000571043 BARHL2Q9NY43 387 aa19.8■□□□□ 0.76
RPAIN-208ENST00000571043 PCDHA4Q9UN74 947 aa19.8■□□□□ 0.76
RPAIN-208ENST00000571043 ATAD5Q96QE3 1844 aa19.8■□□□□ 0.76
RPAIN-208ENST00000571043 SNHG28P0DPA3 235 aa19.79■□□□□ 0.76
RPAIN-208ENST00000571043 INPP5BP32019 993 aa19.79■□□□□ 0.76
RPAIN-208ENST00000571043 PRKG1Q13976 671 aa19.79■□□□□ 0.76
RPAIN-208ENST00000571043 ASPRV1Q53RT3 343 aa19.79■□□□□ 0.76
RPAIN-208ENST00000571043 BLIDQ8IZY5 108 aa19.79■□□□□ 0.76
RPAIN-208ENST00000571043 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.79■□□□□ 0.76
RPAIN-208ENST00000571043 PIBF1Q8WXW3 757 aa19.79■□□□□ 0.76
RPAIN-208ENST00000571043 WRNIP1Q96S55 665 aa19.79■□□□□ 0.76
RPAIN-208ENST00000571043 FAM13BQ9NYF5 915 aa19.79■□□□□ 0.76
RPAIN-208ENST00000571043 KIAA1468Q9P260 1216 aa19.79■□□□□ 0.76
RPAIN-208ENST00000571043 USP25Q9UHP3 1055 aa19.79■□□□□ 0.76
RPAIN-208ENST00000571043 MPHOSPH10O00566 681 aaKnown RBP19.78■□□□□ 0.76
RPAIN-208ENST00000571043 GH2P01242 217 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms