RNA–Protein interactions for RNA: ENST00000569783.1

CDH11-218, Transcript of cadherin 11, humanhuman

TSL 2

Gene CDH11, Length 539 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-218ENST00000569783 IFNL3Q8IZI9 196 aa23.08■■□□□ 1.29
CDH11-218ENST00000569783 KIFC2Q96AC6 838 aa23.08■■□□□ 1.29
CDH11-218ENST00000569783 SYNPO2Q9UMS6 1093 aa23.08■■□□□ 1.29
CDH11-218ENST00000569783 DNAH12Q6ZR08 3092 aa23.08■■□□□ 1.29
CDH11-218ENST00000569783 IGKV6D-41A0A0C4DH26 115 aa23.07■■□□□ 1.28
CDH11-218ENST00000569783 DLL1O00548 723 aa23.07■■□□□ 1.28
CDH11-218ENST00000569783 ATP2A1O14983 1001 aa23.07■■□□□ 1.28
CDH11-218ENST00000569783 TTLL1O95922 423 aa23.07■■□□□ 1.28
CDH11-218ENST00000569783 TAL1P17542 331 aaPredicted RBP23.07■■□□□ 1.28
CDH11-218ENST00000569783 FAM109BQ6ICB4 259 aaPredicted RBP23.07■■□□□ 1.28
CDH11-218ENST00000569783 MKL1Q969V6 931 aa23.07■■□□□ 1.28
CDH11-218ENST00000569783 CEP95Q96GE4 821 aa23.07■■□□□ 1.28
CDH11-218ENST00000569783 FSD1Q9BTV5 496 aa23.07■■□□□ 1.28
CDH11-218ENST00000569783 PDLIM7Q9NR12 457 aa23.07■■□□□ 1.28
CDH11-218ENST00000569783 MTMR4Q9NYA4 1195 aa23.07■■□□□ 1.28
CDH11-218ENST00000569783 FEM1BQ9UK73 627 aa23.07■■□□□ 1.28
CDH11-218ENST00000569783 ZNFX1Q9P2E3 1918 aaKnown RBP23.06■■□□□ 1.28
CDH11-218ENST00000569783 ZNF865P0CJ78 1059 aaPredicted RBP23.06■■□□□ 1.28
CDH11-218ENST00000569783 TSPY3P0CV98 308 aa23.06■■□□□ 1.28
CDH11-218ENST00000569783 TSPY8P0CW00 308 aa23.06■■□□□ 1.28
CDH11-218ENST00000569783 BADQ92934 168 aa23.06■■□□□ 1.28
CDH11-218ENST00000569783 NAPBQ9H115 298 aa23.06■■□□□ 1.28
CDH11-218ENST00000569783 FAM184BQ9ULE4 1060 aa23.06■■□□□ 1.28
CDH11-218ENST00000569783 ISY1Q9ULR0 285 aaKnown RBP23.06■■□□□ 1.28
CDH11-218ENST00000569783 TACC3Q9Y6A5 838 aa23.06■■□□□ 1.28
CDH11-218ENST00000569783 GREB1LQ9C091 1923 aaPredicted RBP23.06■■□□□ 1.28
CDH11-218ENST00000569783 SYNGAP1Q96PV0 1343 aa23.06■■□□□ 1.28
CDH11-218ENST00000569783 TLE2Q04725 743 aa23.05■■□□□ 1.28
CDH11-218ENST00000569783 ANKRD35Q8N283 1001 aa23.05■■□□□ 1.28
CDH11-218ENST00000569783 GMCL1P1Q8NEA9 526 aa23.05■■□□□ 1.28
CDH11-218ENST00000569783 RAVER2Q9HCJ3 691 aaKnown RBP23.05■■□□□ 1.28
CDH11-218ENST00000569783 ZBTB47Q9UFB7 747 aaPredicted RBP23.05■■□□□ 1.28
CDH11-218ENST00000569783 FBXO40Q9UH90 709 aa23.05■■□□□ 1.28
CDH11-218ENST00000569783 ZHX1Q9UKY1 873 aaPredicted RBP23.05■■□□□ 1.28
CDH11-218ENST00000569783 RIPK3Q9Y572 518 aa23.05■■□□□ 1.28
CDH11-218ENST00000569783 A0A1W2PQ45 241 aaPredicted RBP23.04■■□□□ 1.28
CDH11-218ENST00000569783 A0A1W2PQY0 241 aa23.04■■□□□ 1.28
CDH11-218ENST00000569783 POTEB2H3BUK9 544 aa23.04■■□□□ 1.28
CDH11-218ENST00000569783 SHHQ15465 462 aa23.04■■□□□ 1.28
CDH11-218ENST00000569783 ZNF697Q5TEC3 545 aa23.04■■□□□ 1.28
CDH11-218ENST00000569783 MAMDC4Q6UXC1 1216 aa23.04■■□□□ 1.28
CDH11-218ENST00000569783 LRRC47Q8N1G4 583 aaKnown RBP23.04■■□□□ 1.28
CDH11-218ENST00000569783 TSEN34Q9BSV6 310 aaKnown RBP23.04■■□□□ 1.28
CDH11-218ENST00000569783 SLC38A10Q9HBR0 1119 aa23.04■■□□□ 1.28
CDH11-218ENST00000569783 DNAJC25-GNG10A0A024R161 153 aa23.03■■□□□ 1.28
CDH11-218ENST00000569783 CLTBP09497 229 aa23.03■■□□□ 1.28
CDH11-218ENST00000569783 FDX1P10109 184 aa23.03■■□□□ 1.28
CDH11-218ENST00000569783 BMP3P12645 472 aa23.03■■□□□ 1.28
CDH11-218ENST00000569783 OAZ1P54368 228 aa23.03■■□□□ 1.28
CDH11-218ENST00000569783 PPP4R3BQ5MIZ7 849 aa23.03■■□□□ 1.28
CDH11-218ENST00000569783 SLFN13Q68D06 897 aa23.03■■□□□ 1.28
CDH11-218ENST00000569783 SH3RF1Q7Z6J0 888 aa23.03■■□□□ 1.28
CDH11-218ENST00000569783 ZNF467Q7Z7K2 595 aaPredicted RBP23.03■■□□□ 1.28
CDH11-218ENST00000569783 CHST13Q8NET6 341 aa23.03■■□□□ 1.28
CDH11-218ENST00000569783 NEDD1Q8NHV4 660 aa23.03■■□□□ 1.28
CDH11-218ENST00000569783 PI4K2BQ8TCG2 481 aa23.03■■□□□ 1.28
CDH11-218ENST00000569783 NUP133Q8WUM0 1156 aa23.03■■□□□ 1.28
CDH11-218ENST00000569783 SEC62Q99442 399 aaKnown RBP23.03■■□□□ 1.28
CDH11-218ENST00000569783 COL6A3P12111 3177 aa23.03■■□□□ 1.28
CDH11-218ENST00000569783 TRIM43BA6NCK2 446 aa23.02■■□□□ 1.28
CDH11-218ENST00000569783 PQBP1O60828 265 aaKnown RBP23.02■■□□□ 1.28
CDH11-218ENST00000569783 TFAP4Q01664 338 aa23.02■■□□□ 1.28
CDH11-218ENST00000569783 PPARAQ07869 468 aa23.02■■□□□ 1.28
CDH11-218ENST00000569783 TRIM43Q96BQ3 446 aaPredicted RBP23.02■■□□□ 1.28
CDH11-218ENST00000569783 LENG1Q96BZ8 264 aaPredicted RBP23.02■■□□□ 1.28
CDH11-218ENST00000569783 FAM161BQ96MY7 647 aa23.02■■□□□ 1.28
CDH11-218ENST00000569783 STARD7Q9NQZ5 370 aa23.02■■□□□ 1.28
CDH11-218ENST00000569783 PLXNA1Q9UIW2 1896 aa23.02■■□□□ 1.28
CDH11-218ENST00000569783 PLIN4Q96Q06 1357 aa23.01■■□□□ 1.27
CDH11-218ENST00000569783 MOXD2PA6NHM9 499 aa23.01■■□□□ 1.27
CDH11-218ENST00000569783 ADAMTS4O75173 837 aa23.01■■□□□ 1.27
CDH11-218ENST00000569783 SNAI1O95863 264 aaPredicted RBP23.01■■□□□ 1.27
CDH11-218ENST00000569783 RAG1P15918 1043 aa23.01■■□□□ 1.27
CDH11-218ENST00000569783 MX1P20591 662 aa23.01■■□□□ 1.27
CDH11-218ENST00000569783 STAT2P52630 851 aa23.01■■□□□ 1.27
CDH11-218ENST00000569783 IKQ13123 557 aaPredicted RBP23.01■■□□□ 1.27
CDH11-218ENST00000569783 ZMYM1Q5SVZ6 1142 aa23.01■■□□□ 1.27
CDH11-218ENST00000569783 C9orf50Q5SZB4 431 aa23.01■■□□□ 1.27
CDH11-218ENST00000569783 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.01■■□□□ 1.27
CDH11-218ENST00000569783 SPC25Q9HBM1 224 aa23.01■■□□□ 1.27
CDH11-218ENST00000569783 PCDHB15Q9Y5E8 787 aa23.01■■□□□ 1.27
CDH11-218ENST00000569783 SYNRGQ9UMZ2 1314 aa23.01■■□□□ 1.27
CDH11-218ENST00000569783 LTBP2Q14767 1821 aa23.01■■□□□ 1.27
CDH11-218ENST00000569783 SMCHD1A6NHR9 2005 aa23■■□□□ 1.27
CDH11-218ENST00000569783 TMEM232C9JQI7 657 aa23■■□□□ 1.27
CDH11-218ENST00000569783 DUSP11O75319 330 aaKnown RBP23■■□□□ 1.27
CDH11-218ENST00000569783 ACLYP53396 1101 aa23■■□□□ 1.27
CDH11-218ENST00000569783 ACVR2BQ13705 512 aa23■■□□□ 1.27
CDH11-218ENST00000569783 FAM160B2Q86V87 743 aa23■■□□□ 1.27
CDH11-218ENST00000569783 CHURC1Q8WUH1 139 aa23■■□□□ 1.27
CDH11-218ENST00000569783 ABHD16BQ9H3Z7 469 aa23■■□□□ 1.27
CDH11-218ENST00000569783 TMEM39AQ9NV64 488 aa23■■□□□ 1.27
CDH11-218ENST00000569783 CDKN2AIPQ9NXV6 580 aaPredicted RBP23■■□□□ 1.27
CDH11-218ENST00000569783 DCDC2CA8MYV0 355 aa22.99■■□□□ 1.27
CDH11-218ENST00000569783 SLC1A4P43007 532 aa22.99■■□□□ 1.27
CDH11-218ENST00000569783 KCNA10Q16322 511 aa22.99■■□□□ 1.27
CDH11-218ENST00000569783 OTUD7AQ8TE49 926 aaPredicted RBP22.99■■□□□ 1.27
CDH11-218ENST00000569783 HOMER2Q9NSB8 354 aa22.99■■□□□ 1.27
CDH11-218ENST00000569783 MYH4Q9Y623 1939 aa22.98■■□□□ 1.27
CDH11-218ENST00000569783 TSPY2A6NKD2 308 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms