RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 IVNS1ABPQ9Y6Y0 642 aa13.04□□□□□ -0.32
SHCBP1-207ENST00000569702 RBBP6Q7Z6E9 1792 aaKnown RBP13.04□□□□□ -0.32
SHCBP1-207ENST00000569702 ZBED4O75132 1171 aa13.03□□□□□ -0.32
SHCBP1-207ENST00000569702 CDC45O75419 566 aa13.03□□□□□ -0.32
SHCBP1-207ENST00000569702 MYCP01106 439 aaPredicted RBP13.03□□□□□ -0.32
SHCBP1-207ENST00000569702 HMGCRP04035 888 aa13.03□□□□□ -0.32
SHCBP1-207ENST00000569702 SNHG28P0DPA3 235 aa13.03□□□□□ -0.32
SHCBP1-207ENST00000569702 FDX1P10109 184 aa13.03□□□□□ -0.32
SHCBP1-207ENST00000569702 CCL5P13501 91 aa13.03□□□□□ -0.32
SHCBP1-207ENST00000569702 OAZ1P54368 228 aa13.03□□□□□ -0.32
SHCBP1-207ENST00000569702 WDR78Q5VTH9 848 aa13.03□□□□□ -0.32
SHCBP1-207ENST00000569702 KIAA1211Q6ZU35 1233 aa13.03□□□□□ -0.32
SHCBP1-207ENST00000569702 KCTD1Q719H9 257 aa13.03□□□□□ -0.32
SHCBP1-207ENST00000569702 RASGRP2Q7LDG7 609 aa13.03□□□□□ -0.32
SHCBP1-207ENST00000569702 NCAPG2Q86XI2 1143 aa13.03□□□□□ -0.32
SHCBP1-207ENST00000569702 TRMT44Q8IYL2 757 aaKnown RBP13.03□□□□□ -0.32
SHCBP1-207ENST00000569702 ENAHQ8N8S7 591 aaPredicted RBP13.03□□□□□ -0.32
SHCBP1-207ENST00000569702 TRIB2Q92519 343 aa13.03□□□□□ -0.32
SHCBP1-207ENST00000569702 ZSCAN10Q96SZ4 725 aaPredicted RBP13.03□□□□□ -0.32
SHCBP1-207ENST00000569702 APBA2Q99767 749 aa13.03□□□□□ -0.32
SHCBP1-207ENST00000569702 TEX13BQ9BXU2 312 aa13.03□□□□□ -0.32
SHCBP1-207ENST00000569702 CWC22Q9HCG8 908 aaKnown RBP13.03□□□□□ -0.32
SHCBP1-207ENST00000569702 RBM8AQ9Y5S9 174 aaKnown RBP13.03□□□□□ -0.32
SHCBP1-207ENST00000569702 TNRC18O15417 2968 aaPredicted RBP13.03□□□□□ -0.32
SHCBP1-207ENST00000569702 E7EWF7 191 aa13.02□□□□□ -0.33
SHCBP1-207ENST00000569702 IGHA2P01877 340 aa13.02□□□□□ -0.33
SHCBP1-207ENST00000569702 GJB1P08034 283 aa13.02□□□□□ -0.33
SHCBP1-207ENST00000569702 PDHBP11177 359 aa13.02□□□□□ -0.33
SHCBP1-207ENST00000569702 ADORA2AP29274 412 aa13.02□□□□□ -0.33
SHCBP1-207ENST00000569702 COPB2P35606 906 aa13.02□□□□□ -0.33
SHCBP1-207ENST00000569702 CCL14Q16627 93 aa13.02□□□□□ -0.33
SHCBP1-207ENST00000569702 MAP3K21Q5TCX8 1036 aa13.02□□□□□ -0.33
SHCBP1-207ENST00000569702 BTNL9Q6UXG8 535 aa13.02□□□□□ -0.33
SHCBP1-207ENST00000569702 STOX1Q6ZVD7 989 aa13.02□□□□□ -0.33
SHCBP1-207ENST00000569702 CHMP4CQ96CF2 233 aa13.02□□□□□ -0.33
SHCBP1-207ENST00000569702 UNC93B1Q9H1C4 597 aa13.02□□□□□ -0.33
SHCBP1-207ENST00000569702 RIPK3Q9Y572 518 aa13.02□□□□□ -0.33
SHCBP1-207ENST00000569702 ZNF236Q9UL36 1845 aa13.02□□□□□ -0.33
SHCBP1-207ENST00000569702 COBLO75128 1261 aa13.01□□□□□ -0.33
SHCBP1-207ENST00000569702 FCER1AP12319 257 aa13.01□□□□□ -0.33
SHCBP1-207ENST00000569702 EN2P19622 333 aaPredicted RBP13.01□□□□□ -0.33
SHCBP1-207ENST00000569702 MLLT1Q03111 559 aaPredicted RBP13.01□□□□□ -0.33
SHCBP1-207ENST00000569702 TRIM32Q13049 653 aa13.01□□□□□ -0.33
SHCBP1-207ENST00000569702 TRDNQ13061 729 aa13.01□□□□□ -0.33
SHCBP1-207ENST00000569702 NECTIN1Q15223 517 aa13.01□□□□□ -0.33
SHCBP1-207ENST00000569702 SEC23AQ15436 765 aa13.01□□□□□ -0.33
SHCBP1-207ENST00000569702 SNRNP48Q6IEG0 339 aaKnown RBP13.01□□□□□ -0.33
SHCBP1-207ENST00000569702 CYB5R4Q7L1T6 521 aa13.01□□□□□ -0.33
SHCBP1-207ENST00000569702 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.01□□□□□ -0.33
SHCBP1-207ENST00000569702 NPLOC4Q8TAT6 608 aa13.01□□□□□ -0.33
SHCBP1-207ENST00000569702 RNF208Q9H0X6 261 aa13.01□□□□□ -0.33
SHCBP1-207ENST00000569702 RAVER2Q9HCJ3 691 aaKnown RBP13.01□□□□□ -0.33
SHCBP1-207ENST00000569702 ANO2Q9NQ90 1003 aa13.01□□□□□ -0.33
SHCBP1-207ENST00000569702 PAK6Q9NQU5 681 aaPredicted RBP13.01□□□□□ -0.33
SHCBP1-207ENST00000569702 FLRT1Q9NZU1 646 aa13.01□□□□□ -0.33
SHCBP1-207ENST00000569702 PRR12Q9ULL5 1215 aa13.01□□□□□ -0.33
SHCBP1-207ENST00000569702 MTMR7Q9Y216 660 aa13.01□□□□□ -0.33
SHCBP1-207ENST00000569702 ZNF536O15090 1300 aa13.01□□□□□ -0.33
SHCBP1-207ENST00000569702 TNKSO95271 1327 aa13.01□□□□□ -0.33
SHCBP1-207ENST00000569702 RPTORQ8N122 1335 aa13□□□□□ -0.33
SHCBP1-207ENST00000569702 ZKSCAN1P17029 563 aaPredicted RBP13□□□□□ -0.33
SHCBP1-207ENST00000569702 GJA8P48165 433 aa13□□□□□ -0.33
SHCBP1-207ENST00000569702 ZNF543Q08ER8 600 aa13□□□□□ -0.33
SHCBP1-207ENST00000569702 IKQ13123 557 aaPredicted RBP13□□□□□ -0.33
SHCBP1-207ENST00000569702 CCDC96Q2M329 555 aa13□□□□□ -0.33
SHCBP1-207ENST00000569702 TTBK2Q6IQ55 1244 aa13□□□□□ -0.33
SHCBP1-207ENST00000569702 CASC1Q6TDU7 716 aa13□□□□□ -0.33
SHCBP1-207ENST00000569702 DPP9Q86TI2 863 aa13□□□□□ -0.33
SHCBP1-207ENST00000569702 CPXCR1Q8N123 301 aa13□□□□□ -0.33
SHCBP1-207ENST00000569702 PNMA1Q8ND90 353 aa13□□□□□ -0.33
SHCBP1-207ENST00000569702 NCOA7Q8NI08 942 aa13□□□□□ -0.33
SHCBP1-207ENST00000569702 UBAC1Q9BSL1 405 aa13□□□□□ -0.33
SHCBP1-207ENST00000569702 ISY1Q9ULR0 285 aaKnown RBP13□□□□□ -0.33
SHCBP1-207ENST00000569702 FRMPD2Q68DX3 1309 aaPredicted RBP12.99□□□□□ -0.33
SHCBP1-207ENST00000569702 SLC27A2O14975 620 aa12.99□□□□□ -0.33
SHCBP1-207ENST00000569702 SLC16A2P36021 539 aa12.99□□□□□ -0.33
SHCBP1-207ENST00000569702 CACNB2Q08289 660 aaPredicted RBP12.99□□□□□ -0.33
SHCBP1-207ENST00000569702 GPATCH4Q5T3I0 446 aaKnown RBP12.99□□□□□ -0.33
SHCBP1-207ENST00000569702 OLFML2BQ68BL8 750 aa12.99□□□□□ -0.33
SHCBP1-207ENST00000569702 CREB3L3Q68CJ9 461 aa12.99□□□□□ -0.33
SHCBP1-207ENST00000569702 RALYLQ86SE5 291 aaKnown RBP12.99□□□□□ -0.33
SHCBP1-207ENST00000569702 MB21D2Q8IYB1 491 aaPredicted RBP12.99□□□□□ -0.33
SHCBP1-207ENST00000569702 SHISA4Q96DD7 197 aa12.99□□□□□ -0.33
SHCBP1-207ENST00000569702 MMP19Q99542 508 aa12.99□□□□□ -0.33
SHCBP1-207ENST00000569702 RANBP17Q9H2T7 1088 aaKnown RBP12.99□□□□□ -0.33
SHCBP1-207ENST00000569702 KAT14Q9H8E8 782 aa12.99□□□□□ -0.33
SHCBP1-207ENST00000569702 HMX1Q9NP08 348 aaPredicted RBP12.99□□□□□ -0.33
SHCBP1-207ENST00000569702 GPCPD1Q9NPB8 672 aa12.99□□□□□ -0.33
SHCBP1-207ENST00000569702 CTDP1Q9Y5B0 961 aaPredicted RBP12.99□□□□□ -0.33
SHCBP1-207ENST00000569702 ZNFX1Q9P2E3 1918 aaKnown RBP12.98□□□□□ -0.33
SHCBP1-207ENST00000569702 SGPL1O95470 568 aa12.98□□□□□ -0.33
SHCBP1-207ENST00000569702 PRKAR2AP13861 404 aaKnown RBP12.98□□□□□ -0.33
SHCBP1-207ENST00000569702 CAPN2P17655 700 aa12.98□□□□□ -0.33
SHCBP1-207ENST00000569702 ANTXR2P58335 489 aa12.98□□□□□ -0.33
SHCBP1-207ENST00000569702 KCTD2Q14681 263 aa12.98□□□□□ -0.33
SHCBP1-207ENST00000569702 IFIT1BQ5T764 474 aaKnown RBP12.98□□□□□ -0.33
SHCBP1-207ENST00000569702 SYDE2Q5VT97 1194 aa12.98□□□□□ -0.33
SHCBP1-207ENST00000569702 CHST13Q8NET6 341 aa12.98□□□□□ -0.33
SHCBP1-207ENST00000569702 U2AF1L4Q8WU68 220 aaKnown RBP12.98□□□□□ -0.33
SHCBP1-207ENST00000569702 MAML3Q96JK9 1138 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms