RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 MAST2Q6P0Q8 1798 aa6.16□□□□□ -1.42
SF3B3-213ENST00000569687 IGKV6D-41A0A0C4DH26 115 aa6.15□□□□□ -1.42
SF3B3-213ENST00000569687 USP17L3A6NCW0 530 aa6.15□□□□□ -1.42
SF3B3-213ENST00000569687 USP17L4A6NCW7 530 aa6.15□□□□□ -1.42
SF3B3-213ENST00000569687 TSPY3P0CV98 308 aa6.15□□□□□ -1.42
SF3B3-213ENST00000569687 TSPY8P0CW00 308 aa6.15□□□□□ -1.42
SF3B3-213ENST00000569687 GTF2IP78347 998 aa6.15□□□□□ -1.42
SF3B3-213ENST00000569687 NOLC1Q14978 699 aaKnown RBP eCLIP6.15□□□□□ -1.42
SF3B3-213ENST00000569687 ZRSR1Q15695 479 aaKnown RBP6.15□□□□□ -1.42
SF3B3-213ENST00000569687 SLC35G1Q2M3R5 365 aa6.15□□□□□ -1.42
SF3B3-213ENST00000569687 GRIPAP1Q4V328 841 aa6.15□□□□□ -1.42
SF3B3-213ENST00000569687 EARS2Q5JPH6 523 aaKnown RBP6.15□□□□□ -1.42
SF3B3-213ENST00000569687 ARL6IP4Q66PJ3 421 aaKnown RBP6.15□□□□□ -1.42
SF3B3-213ENST00000569687 CC2D2BQ6DHV5 1058 aa6.15□□□□□ -1.42
SF3B3-213ENST00000569687 USP17L1Q7RTZ2 530 aa6.15□□□□□ -1.42
SF3B3-213ENST00000569687 SH3RF1Q7Z6J0 888 aa6.15□□□□□ -1.42
SF3B3-213ENST00000569687 SLC51AQ86UW1 340 aa6.15□□□□□ -1.42
SF3B3-213ENST00000569687 METTL16Q86W50 562 aaKnown RBP6.15□□□□□ -1.42
SF3B3-213ENST00000569687 MAPKAPK5Q8IW41 473 aa6.15□□□□□ -1.42
SF3B3-213ENST00000569687 BLIDQ8IZY5 108 aa6.15□□□□□ -1.42
SF3B3-213ENST00000569687 C4orf32Q8N8J7 132 aa6.15□□□□□ -1.42
SF3B3-213ENST00000569687 MLKLQ8NB16 471 aa6.15□□□□□ -1.42
SF3B3-213ENST00000569687 CNNM3Q8NE01 707 aa6.15□□□□□ -1.42
SF3B3-213ENST00000569687 SLC16A10Q8TF71 515 aa6.15□□□□□ -1.42
SF3B3-213ENST00000569687 CCDC34Q96HJ3 373 aa6.15□□□□□ -1.42
SF3B3-213ENST00000569687 L3MBTL3Q96JM7 780 aaPredicted RBP6.15□□□□□ -1.42
SF3B3-213ENST00000569687 PYM1Q9BRP8 204 aaKnown RBP6.15□□□□□ -1.42
SF3B3-213ENST00000569687 SPZ1Q9BXG8 430 aa6.15□□□□□ -1.42
SF3B3-213ENST00000569687 TMX4Q9H1E5 349 aaPredicted RBP6.15□□□□□ -1.42
SF3B3-213ENST00000569687 IMPACTQ9P2X3 320 aa6.15□□□□□ -1.42
SF3B3-213ENST00000569687 PCDHA4Q9UN74 947 aa6.15□□□□□ -1.42
SF3B3-213ENST00000569687 DAGLAQ9Y4D2 1042 aa6.15□□□□□ -1.42
SF3B3-213ENST00000569687 PCDHA5Q9Y5H7 936 aa6.15□□□□□ -1.42
SF3B3-213ENST00000569687 FLT1P17948 1338 aa6.15□□□□□ -1.43
SF3B3-213ENST00000569687 MYO3BQ8WXR4 1341 aa6.15□□□□□ -1.43
SF3B3-213ENST00000569687 DLEC1Q9Y238 1755 aa6.15□□□□□ -1.43
SF3B3-213ENST00000569687 CCDC88AQ3V6T2 1871 aa6.15□□□□□ -1.43
SF3B3-213ENST00000569687 CHD4Q14839 1912 aa6.15□□□□□ -1.43
SF3B3-213ENST00000569687 LRRC37AA6NMS7 1700 aa6.14□□□□□ -1.43
SF3B3-213ENST00000569687 COL11A2P13942 1736 aaPredicted RBP6.14□□□□□ -1.43
SF3B3-213ENST00000569687 H0YIN7 160 aa6.14□□□□□ -1.43
SF3B3-213ENST00000569687 POLR2DO15514 142 aaKnown RBP6.14□□□□□ -1.43
SF3B3-213ENST00000569687 ACTN4O43707 911 aaKnown RBP6.14□□□□□ -1.43
SF3B3-213ENST00000569687 OATP04181 439 aa6.14□□□□□ -1.43
SF3B3-213ENST00000569687 SLFN14P0C7P3 912 aa6.14□□□□□ -1.43
SF3B3-213ENST00000569687 SNHG28P0DPA3 235 aa6.14□□□□□ -1.43
SF3B3-213ENST00000569687 VEGFAP15692 232 aaPredicted RBP6.14□□□□□ -1.43
SF3B3-213ENST00000569687 NLRP5P59047 1200 aa6.14□□□□□ -1.43
SF3B3-213ENST00000569687 TPM4P67936 248 aa6.14□□□□□ -1.43
SF3B3-213ENST00000569687 ATP2C1P98194 919 aaPredicted RBP6.14□□□□□ -1.43
SF3B3-213ENST00000569687 SEMA3FQ13275 785 aa6.14□□□□□ -1.43
SF3B3-213ENST00000569687 MORC3Q14149 939 aa6.14□□□□□ -1.43
SF3B3-213ENST00000569687 DPCR1Q3MIW9 517 aa6.14□□□□□ -1.43
SF3B3-213ENST00000569687 PPP4R3BQ5MIZ7 849 aa6.14□□□□□ -1.43
SF3B3-213ENST00000569687 TTC38Q5R3I4 469 aa6.14□□□□□ -1.43
SF3B3-213ENST00000569687 IER5LQ5T953 404 aa6.14□□□□□ -1.43
SF3B3-213ENST00000569687 TMCO4Q5TGY1 634 aa6.14□□□□□ -1.43
SF3B3-213ENST00000569687 APOBEC3HQ6NTF7 200 aaKnown RBP6.14□□□□□ -1.43
SF3B3-213ENST00000569687 DPP8Q6V1X1 898 aaPredicted RBP6.14□□□□□ -1.43
SF3B3-213ENST00000569687 CCDC186Q7Z3E2 898 aa6.14□□□□□ -1.43
SF3B3-213ENST00000569687 STAG2Q8N3U4 1231 aa6.14□□□□□ -1.43
SF3B3-213ENST00000569687 CERS5Q8N5B7 392 aa6.14□□□□□ -1.43
SF3B3-213ENST00000569687 ENOX1Q8TC92 643 aaKnown RBP6.14□□□□□ -1.43
SF3B3-213ENST00000569687 C7orf43Q8WVR3 580 aa6.14□□□□□ -1.43
SF3B3-213ENST00000569687 ZDHHC15Q96MV8 337 aa6.14□□□□□ -1.43
SF3B3-213ENST00000569687 ZNF830Q96NB3 372 aaPredicted RBP6.14□□□□□ -1.43
SF3B3-213ENST00000569687 PDGFDQ9GZP0 370 aaPredicted RBP6.14□□□□□ -1.43
SF3B3-213ENST00000569687 OSBPL5Q9H0X9 879 aaPredicted RBP6.14□□□□□ -1.43
SF3B3-213ENST00000569687 CSRNP2Q9H175 543 aa6.14□□□□□ -1.43
SF3B3-213ENST00000569687 KCNF1Q9H3M0 494 aa6.14□□□□□ -1.43
SF3B3-213ENST00000569687 RIOX1Q9H6W3 641 aa6.14□□□□□ -1.43
SF3B3-213ENST00000569687 TTC12Q9H892 705 aaPredicted RBP6.14□□□□□ -1.43
SF3B3-213ENST00000569687 KCND1Q9NSA2 647 aa6.14□□□□□ -1.43
SF3B3-213ENST00000569687 BARHL2Q9NY43 387 aa6.14□□□□□ -1.43
SF3B3-213ENST00000569687 MTMR4Q9NYA4 1195 aa6.14□□□□□ -1.43
SF3B3-213ENST00000569687 SWAP70Q9UH65 585 aa6.14□□□□□ -1.43
SF3B3-213ENST00000569687 SAP30BPQ9UHR5 308 aaKnown RBP6.14□□□□□ -1.43
SF3B3-213ENST00000569687 PLIN4Q96Q06 1357 aa6.14□□□□□ -1.43
SF3B3-213ENST00000569687 C10orf71Q711Q0 1435 aa6.14□□□□□ -1.43
SF3B3-213ENST00000569687 LTBP1Q14766 1721 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 MYH2Q9UKX2 1941 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 hCG_1642624A0A1W2PR95 340 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 ESYT2A0FGR8 921 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 KLRF2D3W0D1 207 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 hCG_1984214I3L0E3 225 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 STXBP3O00186 592 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 LAD1O00515 517 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 RIMBP2O15034 1052 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 CYTH3O43739 400 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 SMC2O95347 1197 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 TPM2P07951 284 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 PARP1P09874 1014 aaKnown RBP6.13□□□□□ -1.43
SF3B3-213ENST00000569687 BMP6P22004 513 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 ERCC5P28715 1186 aaPredicted RBP6.13□□□□□ -1.43
SF3B3-213ENST00000569687 LONP1P36776 959 aaKnown RBP6.13□□□□□ -1.43
SF3B3-213ENST00000569687 GRIN1Q05586 938 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 ORC2Q13416 577 aaPredicted RBP6.13□□□□□ -1.43
SF3B3-213ENST00000569687 PNOCQ13519 176 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 POSTNQ15063 836 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 ZNF174Q15697 407 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms